RNA–Protein interactions for RNA: ENST00000527323.5

CAPN1-208, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-208ENST00000527323 MAN2A1Q16706 1144 aa13.8□□□□□ -0.2
CAPN1-208ENST00000527323 CFAP221Q4G0U5 840 aa13.8□□□□□ -0.2
CAPN1-208ENST00000527323 IFT20Q8IY31 132 aa13.8□□□□□ -0.2
CAPN1-208ENST00000527323 TTLL6Q8N841 843 aa13.8□□□□□ -0.2
CAPN1-208ENST00000527323 CCDC43Q96MW1 224 aaKnown RBP13.8□□□□□ -0.2
CAPN1-208ENST00000527323 EPB41L5Q9HCM4 733 aa13.8□□□□□ -0.2
CAPN1-208ENST00000527323 DOCK2Q92608 1830 aa13.8□□□□□ -0.2
CAPN1-208ENST00000527323 ESYT3A0FGR9 886 aa13.8□□□□□ -0.2
CAPN1-208ENST00000527323 KRT14P02533 472 aa13.8□□□□□ -0.2
CAPN1-208ENST00000527323 GUCY2FP51841 1108 aa13.8□□□□□ -0.2
CAPN1-208ENST00000527323 GUCY2DQ02846 1103 aa13.8□□□□□ -0.2
CAPN1-208ENST00000527323 ITIH3Q06033 890 aa13.8□□□□□ -0.2
CAPN1-208ENST00000527323 NFIAQ12857 509 aa13.8□□□□□ -0.2
CAPN1-208ENST00000527323 NNTQ13423 1086 aa13.8□□□□□ -0.2
CAPN1-208ENST00000527323 SBK1Q52WX2 424 aa13.8□□□□□ -0.2
CAPN1-208ENST00000527323 LARGE2Q8N3Y3 721 aa13.8□□□□□ -0.2
CAPN1-208ENST00000527323 ZIM3Q96PE6 472 aa13.8□□□□□ -0.2
CAPN1-208ENST00000527323 SALL4Q9UJQ4 1053 aa13.8□□□□□ -0.2
CAPN1-208ENST00000527323 NFU1Q9UMS0 254 aa13.8□□□□□ -0.2
CAPN1-208ENST00000527323 CLRN2A0PK11 232 aa13.79□□□□□ -0.2
CAPN1-208ENST00000527323 KLRF2D3W0D1 207 aa13.79□□□□□ -0.2
CAPN1-208ENST00000527323 KIAA0754O94854 1291 aa13.79□□□□□ -0.2
CAPN1-208ENST00000527323 HNRNPH3P31942 346 aaKnown RBP13.79□□□□□ -0.2
CAPN1-208ENST00000527323 TTMPQ5BVD1 217 aa13.79□□□□□ -0.2
CAPN1-208ENST00000527323 MMS22LQ6ZRQ5 1243 aa13.79□□□□□ -0.2
CAPN1-208ENST00000527323 KRT25Q7Z3Z0 450 aa13.79□□□□□ -0.2
CAPN1-208ENST00000527323 TMC4Q7Z404 712 aa13.79□□□□□ -0.2
CAPN1-208ENST00000527323 C6orf50Q9HD87 102 aa13.79□□□□□ -0.2
CAPN1-208ENST00000527323 SIK3Q9Y2K2 1263 aa13.79□□□□□ -0.2
CAPN1-208ENST00000527323 FLT1P17948 1338 aa13.79□□□□□ -0.2
CAPN1-208ENST00000527323 YDJCA8MPS7 323 aa13.79□□□□□ -0.2
CAPN1-208ENST00000527323 H0YHG0 523 aa13.79□□□□□ -0.2
CAPN1-208ENST00000527323 SLC1A4P43007 532 aa13.79□□□□□ -0.2
CAPN1-208ENST00000527323 CARSP49589 748 aaKnown RBP13.79□□□□□ -0.2
CAPN1-208ENST00000527323 IRX3P78415 501 aaPredicted RBP13.79□□□□□ -0.2
CAPN1-208ENST00000527323 LRRC41Q15345 812 aa13.79□□□□□ -0.2
CAPN1-208ENST00000527323 CENPPQ6IPU0 288 aa13.79□□□□□ -0.2
CAPN1-208ENST00000527323 NEK8Q86SG6 692 aa13.79□□□□□ -0.2
CAPN1-208ENST00000527323 CCDC155Q8N6L0 562 aa13.79□□□□□ -0.2
CAPN1-208ENST00000527323 SH3GL2Q99962 352 aa13.79□□□□□ -0.2
CAPN1-208ENST00000527323 TLR10Q9BXR5 811 aa13.79□□□□□ -0.2
CAPN1-208ENST00000527323 BIN2Q9UBW5 565 aaPredicted RBP13.79□□□□□ -0.2
CAPN1-208ENST00000527323 HEXIM1O94992 359 aaKnown RBP13.79□□□□□ -0.2
CAPN1-208ENST00000527323 ARID5AQ03989 594 aa13.79□□□□□ -0.2
CAPN1-208ENST00000527323 SLC35G1Q2M3R5 365 aa13.79□□□□□ -0.2
CAPN1-208ENST00000527323 TEX11Q8IYF3 940 aa13.79□□□□□ -0.2
CAPN1-208ENST00000527323 DAGLBQ8NCG7 672 aa13.79□□□□□ -0.2
CAPN1-208ENST00000527323 RUBCNQ92622 972 aa13.79□□□□□ -0.2
CAPN1-208ENST00000527323 MTMR8Q96EF0 704 aa13.79□□□□□ -0.2
CAPN1-208ENST00000527323 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.79□□□□□ -0.2
CAPN1-208ENST00000527323 CPP00450 1065 aa13.78□□□□□ -0.2
CAPN1-208ENST00000527323 MNAT1P51948 309 aa13.78□□□□□ -0.2
CAPN1-208ENST00000527323 FBXW10Q5XX13 1052 aa13.78□□□□□ -0.2
CAPN1-208ENST00000527323 OTUD6BQ8N6M0 293 aa13.78□□□□□ -0.2
CAPN1-208ENST00000527323 WDR66Q8TBY9 1149 aa13.78□□□□□ -0.2
CAPN1-208ENST00000527323 TBCKQ8TEA7 893 aa13.78□□□□□ -0.2
CAPN1-208ENST00000527323 CENPHQ9H3R5 247 aa13.78□□□□□ -0.2
CAPN1-208ENST00000527323 COL11A2P13942 1736 aaPredicted RBP13.78□□□□□ -0.2
CAPN1-208ENST00000527323 MYMKA6NI61 221 aa13.78□□□□□ -0.2
CAPN1-208ENST00000527323 FTCDO95954 541 aa13.78□□□□□ -0.2
CAPN1-208ENST00000527323 GLI1P08151 1106 aa13.78□□□□□ -0.2
CAPN1-208ENST00000527323 GUCY2CP25092 1073 aa13.78□□□□□ -0.2
CAPN1-208ENST00000527323 GNA11P29992 359 aa13.78□□□□□ -0.2
CAPN1-208ENST00000527323 PPARDQ03181 441 aa13.78□□□□□ -0.2
CAPN1-208ENST00000527323 KLHDC7AQ5VTJ3 777 aa13.78□□□□□ -0.2
CAPN1-208ENST00000527323 TMED8Q6PL24 325 aaPredicted RBP13.78□□□□□ -0.2
CAPN1-208ENST00000527323 B4GALNT4Q76KP1 1039 aa13.78□□□□□ -0.2
CAPN1-208ENST00000527323 ZNF572Q7Z3I7 529 aaPredicted RBP13.78□□□□□ -0.2
CAPN1-208ENST00000527323 TSG101Q99816 390 aa13.78□□□□□ -0.2
CAPN1-208ENST00000527323 TMEM47Q9BQJ4 181 aa13.78□□□□□ -0.2
CAPN1-208ENST00000527323 GRIN2DO15399 1336 aa13.78□□□□□ -0.2
CAPN1-208ENST00000527323 ZSCAN5CA6NGD5 496 aaPredicted RBP13.77□□□□□ -0.2
CAPN1-208ENST00000527323 FAM153BP0C7A2 387 aa13.77□□□□□ -0.2
CAPN1-208ENST00000527323 FAM153CQ494X1 144 aa13.77□□□□□ -0.2
CAPN1-208ENST00000527323 CCDC40Q4G0X9 1142 aa13.77□□□□□ -0.2
CAPN1-208ENST00000527323 C12orf60Q5U649 245 aa13.77□□□□□ -0.2
CAPN1-208ENST00000527323 KRT12Q99456 494 aa13.77□□□□□ -0.2
CAPN1-208ENST00000527323 DDX4Q9NQI0 724 aaKnown RBP13.77□□□□□ -0.2
CAPN1-208ENST00000527323 SEC63Q9UGP8 760 aaKnown RBP13.77□□□□□ -0.2
CAPN1-208ENST00000527323 FAM153AQ9UHL3 310 aa13.77□□□□□ -0.2
CAPN1-208ENST00000527323 A6NNZ2 444 aa13.77□□□□□ -0.21
CAPN1-208ENST00000527323 EPB41P11171 864 aaKnown RBP13.77□□□□□ -0.21
CAPN1-208ENST00000527323 PAK2Q13177 524 aa13.77□□□□□ -0.21
CAPN1-208ENST00000527323 TUBB8Q3ZCM7 444 aa13.77□□□□□ -0.21
CAPN1-208ENST00000527323 SLC9C1Q4G0N8 1177 aa13.77□□□□□ -0.21
CAPN1-208ENST00000527323 GLE1Q53GS7 698 aaKnown RBP13.77□□□□□ -0.21
CAPN1-208ENST00000527323 PDXDC1Q6P996 788 aa13.77□□□□□ -0.21
CAPN1-208ENST00000527323 POTEDQ86YR6 584 aa13.77□□□□□ -0.21
CAPN1-208ENST00000527323 CDAN1Q8IWY9 1227 aa13.77□□□□□ -0.21
CAPN1-208ENST00000527323 CAVIN3Q969G5 261 aa13.77□□□□□ -0.21
CAPN1-208ENST00000527323 MMTAG2Q9BU76 263 aaKnown RBP13.77□□□□□ -0.21
CAPN1-208ENST00000527323 TDRD3Q9H7E2 651 aaKnown RBP13.77□□□□□ -0.21
CAPN1-208ENST00000527323 LUC7LQ9NQ29 371 aaKnown RBP13.77□□□□□ -0.21
CAPN1-208ENST00000527323 DAGLAQ9Y4D2 1042 aa13.77□□□□□ -0.21
CAPN1-208ENST00000527323 CAPN7Q9Y6W3 813 aa13.77□□□□□ -0.21
CAPN1-208ENST00000527323 PALMO75781 387 aa13.77□□□□□ -0.21
CAPN1-208ENST00000527323 POLD1P28340 1107 aa13.77□□□□□ -0.21
CAPN1-208ENST00000527323 MAATS1Q7Z4T9 603 aa13.77□□□□□ -0.21
CAPN1-208ENST00000527323 KAT2BQ92831 832 aa13.77□□□□□ -0.21
CAPN1-208ENST00000527323 CNKSR1Q969H4 720 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms