RNA–Protein interactions for RNA: ENST00000527215.6

CTSB-213, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-213ENST00000527215 PGBD1Q96JS3 809 aa18.45■□□□□ 0.54
CTSB-213ENST00000527215 CDX2Q99626 313 aaPredicted RBP18.45■□□□□ 0.54
CTSB-213ENST00000527215 C16orf70Q9BSU1 422 aa18.45■□□□□ 0.54
CTSB-213ENST00000527215 EHMT1Q9H9B1 1298 aa18.45■□□□□ 0.54
CTSB-213ENST00000527215 UBIAD1Q9Y5Z9 338 aa18.45■□□□□ 0.54
CTSB-213ENST00000527215 CYP46A1Q9Y6A2 500 aa18.45■□□□□ 0.54
CTSB-213ENST00000527215 LGALS2P05162 132 aa18.44■□□□□ 0.54
CTSB-213ENST00000527215 SCG2P13521 617 aa18.44■□□□□ 0.54
CTSB-213ENST00000527215 EVCP57679 992 aa18.44■□□□□ 0.54
CTSB-213ENST00000527215 TOB2Q14106 344 aaPredicted RBP18.44■□□□□ 0.54
CTSB-213ENST00000527215 OTOP2Q7RTS6 562 aa18.44■□□□□ 0.54
CTSB-213ENST00000527215 RETREG2Q8NC44 543 aa18.44■□□□□ 0.54
CTSB-213ENST00000527215 GPR20Q99678 358 aa18.44■□□□□ 0.54
CTSB-213ENST00000527215 SENP7Q9BQF6 1050 aa18.44■□□□□ 0.54
CTSB-213ENST00000527215 ANO3Q9BYT9 981 aa18.44■□□□□ 0.54
CTSB-213ENST00000527215 TMEM260Q9NX78 707 aa18.44■□□□□ 0.54
CTSB-213ENST00000527215 CXXC1Q9P0U4 656 aaPredicted RBP18.44■□□□□ 0.54
CTSB-213ENST00000527215 TELO2Q9Y4R8 837 aa18.44■□□□□ 0.54
CTSB-213ENST00000527215 WDR81Q562E7 1941 aa18.44■□□□□ 0.54
CTSB-213ENST00000527215 H3BRB1 525 aa18.43■□□□□ 0.54
CTSB-213ENST00000527215 PRPF3O43395 683 aaKnown RBP18.43■□□□□ 0.54
CTSB-213ENST00000527215 ATP9AO75110 1047 aa18.43■□□□□ 0.54
CTSB-213ENST00000527215 IQCF3P0C7M6 154 aa18.43■□□□□ 0.54
CTSB-213ENST00000527215 PDIA3P30101 505 aaKnown RBP18.43■□□□□ 0.54
CTSB-213ENST00000527215 SP4Q02446 784 aa18.43■□□□□ 0.54
CTSB-213ENST00000527215 MTMR1Q13613 665 aa18.43■□□□□ 0.54
CTSB-213ENST00000527215 DEFB128Q7Z7B8 93 aa18.43■□□□□ 0.54
CTSB-213ENST00000527215 TEX2Q8IWB9 1127 aa18.43■□□□□ 0.54
CTSB-213ENST00000527215 CCDC155Q8N6L0 562 aa18.43■□□□□ 0.54
CTSB-213ENST00000527215 GIMAP8Q8ND71 665 aaPredicted RBP18.43■□□□□ 0.54
CTSB-213ENST00000527215 DHX38Q92620 1227 aaKnown RBP18.43■□□□□ 0.54
CTSB-213ENST00000527215 PHKBQ93100 1093 aa18.43■□□□□ 0.54
CTSB-213ENST00000527215 CDHR1Q96JP9 859 aa18.43■□□□□ 0.54
CTSB-213ENST00000527215 UPF3BQ9BZI7 483 aaKnown RBP18.43■□□□□ 0.54
CTSB-213ENST00000527215 TM6SF1Q9BZW5 370 aa18.43■□□□□ 0.54
CTSB-213ENST00000527215 MTIF3Q9H2K0 278 aaKnown RBP18.43■□□□□ 0.54
CTSB-213ENST00000527215 TUT1Q9H6E5 874 aaKnown RBP18.43■□□□□ 0.54
CTSB-213ENST00000527215 GRXCR1A8MXD5 290 aa18.42■□□□□ 0.54
CTSB-213ENST00000527215 FOSP01100 380 aaPredicted RBP18.42■□□□□ 0.54
CTSB-213ENST00000527215 PFKMP08237 780 aa18.42■□□□□ 0.54
CTSB-213ENST00000527215 FOSL2P15408 326 aa18.42■□□□□ 0.54
CTSB-213ENST00000527215 KCNA2P16389 499 aa18.42■□□□□ 0.54
CTSB-213ENST00000527215 RFC2P35250 354 aa18.42■□□□□ 0.54
CTSB-213ENST00000527215 CLK2P49760 499 aaKnown RBP18.42■□□□□ 0.54
CTSB-213ENST00000527215 CCT2P78371 535 aaKnown RBP18.42■□□□□ 0.54
CTSB-213ENST00000527215 HIC1Q14526 733 aa18.42■□□□□ 0.54
CTSB-213ENST00000527215 NTRK3Q16288 839 aa18.42■□□□□ 0.54
CTSB-213ENST00000527215 PKN1Q16512 942 aa18.42■□□□□ 0.54
CTSB-213ENST00000527215 MAFAQ8NHW3 353 aaPredicted RBP18.42■□□□□ 0.54
CTSB-213ENST00000527215 CAGE1Q8TC20 777 aa18.42■□□□□ 0.54
CTSB-213ENST00000527215 GLT8D2Q9H1C3 349 aa18.42■□□□□ 0.54
CTSB-213ENST00000527215 NCOA5Q9HCD5 579 aaKnown RBP18.42■□□□□ 0.54
CTSB-213ENST00000527215 JADE2Q9NQC1 790 aa18.42■□□□□ 0.54
CTSB-213ENST00000527215 PKD2L1Q9P0L9 805 aa18.42■□□□□ 0.54
CTSB-213ENST00000527215 PPFIA3O75145 1194 aa18.41■□□□□ 0.54
CTSB-213ENST00000527215 DNAJB2P25686 324 aa18.41■□□□□ 0.54
CTSB-213ENST00000527215 ZNF200P98182 395 aaPredicted RBP18.41■□□□□ 0.54
CTSB-213ENST00000527215 AP3B2Q13367 1082 aa18.41■□□□□ 0.54
CTSB-213ENST00000527215 UTP14CQ5TAP6 766 aaKnown RBP18.41■□□□□ 0.54
CTSB-213ENST00000527215 TRIM50Q86XT4 487 aa18.41■□□□□ 0.54
CTSB-213ENST00000527215 AFAP1L1Q8TED9 768 aa18.41■□□□□ 0.54
CTSB-213ENST00000527215 MXRA8Q9BRK3 442 aa18.41■□□□□ 0.54
CTSB-213ENST00000527215 LARP6Q9BRS8 491 aaKnown RBP18.41■□□□□ 0.54
CTSB-213ENST00000527215 SLC26A6Q9BXS9 759 aa18.41■□□□□ 0.54
CTSB-213ENST00000527215 RNF26Q9BY78 433 aaPredicted RBP18.41■□□□□ 0.54
CTSB-213ENST00000527215 TTYH1Q9H313 450 aaPredicted RBP18.41■□□□□ 0.54
CTSB-213ENST00000527215 SIP14410 1827 aa18.4■□□□□ 0.54
CTSB-213ENST00000527215 ADAMTS3O15072 1205 aa18.4■□□□□ 0.54
CTSB-213ENST00000527215 SMIM10L2AP0DMW4 78 aa18.4■□□□□ 0.54
CTSB-213ENST00000527215 SMIM10L2BP0DMW5 78 aa18.4■□□□□ 0.54
CTSB-213ENST00000527215 IFNAR1P17181 557 aa18.4■□□□□ 0.54
CTSB-213ENST00000527215 AKAP17AQ02040 695 aaKnown RBP18.4■□□□□ 0.54
CTSB-213ENST00000527215 PTK7Q13308 1070 aa18.4■□□□□ 0.54
CTSB-213ENST00000527215 JAKMIP3Q5VZ66 844 aa18.4■□□□□ 0.54
CTSB-213ENST00000527215 CYP2W1Q8TAV3 490 aa18.4■□□□□ 0.54
CTSB-213ENST00000527215 CCDC12Q8WUD4 166 aaPredicted RBP18.4■□□□□ 0.54
CTSB-213ENST00000527215 MYLIPQ8WY64 445 aa18.4■□□□□ 0.54
CTSB-213ENST00000527215 WNT8BQ93098 351 aa18.4■□□□□ 0.54
CTSB-213ENST00000527215 MYH9P35579 1960 aaKnown RBP18.4■□□□□ 0.54
CTSB-213ENST00000527215 MICAL3Q7RTP6 2002 aa18.39■□□□□ 0.53
CTSB-213ENST00000527215 ESYT2A0FGR8 921 aa18.39■□□□□ 0.53
CTSB-213ENST00000527215 C17orf102A2RUQ5 167 aa18.39■□□□□ 0.53
CTSB-213ENST00000527215 ZBBXA8MT70 800 aa18.39■□□□□ 0.53
CTSB-213ENST00000527215 MAFGO15525 162 aa18.39■□□□□ 0.53
CTSB-213ENST00000527215 CKBP12277 381 aa18.39■□□□□ 0.53
CTSB-213ENST00000527215 SELPP16109 830 aa18.39■□□□□ 0.53
CTSB-213ENST00000527215 TCF7P36402 384 aaPredicted RBP18.39■□□□□ 0.53
CTSB-213ENST00000527215 SREBF1P36956 1147 aa18.39■□□□□ 0.53
CTSB-213ENST00000527215 PBX2P40425 430 aa18.39■□□□□ 0.53
CTSB-213ENST00000527215 RBL2Q08999 1139 aa18.39■□□□□ 0.53
CTSB-213ENST00000527215 TRIM71Q2Q1W2 868 aaKnown RBP18.39■□□□□ 0.53
CTSB-213ENST00000527215 LRRC8DQ7L1W4 858 aa18.39■□□□□ 0.53
CTSB-213ENST00000527215 PBX4Q9BYU1 374 aa18.39■□□□□ 0.53
CTSB-213ENST00000527215 FTOQ9C0B1 505 aaKnown RBP eCLIP18.39■□□□□ 0.533e-19■□□□□ 9.3
CTSB-213ENST00000527215 ZMYND12Q9H0C1 365 aa18.39■□□□□ 0.53
CTSB-213ENST00000527215 C6orf50Q9HD87 102 aa18.39■□□□□ 0.53
CTSB-213ENST00000527215 KCNH7Q9NS40 1196 aa18.39■□□□□ 0.53
CTSB-213ENST00000527215 PDRG1Q9NUG6 133 aa18.39■□□□□ 0.53
CTSB-213ENST00000527215 ZNF215Q9UL58 517 aaPredicted RBP18.39■□□□□ 0.53
CTSB-213ENST00000527215 SLC4A7Q9Y6M7 1214 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms