RNA–Protein interactions for RNA: ENST00000526117.5

LMX1B-203, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 1,195 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-203ENST00000526117 CUL4AQ13619 759 aa19.64■□□□□ 0.73
LMX1B-203ENST00000526117 ITGA7Q13683 1181 aa19.64■□□□□ 0.73
LMX1B-203ENST00000526117 KRT40Q6A162 431 aa19.64■□□□□ 0.73
LMX1B-203ENST00000526117 CYFIP1Q7L576 1253 aa19.64■□□□□ 0.73
LMX1B-203ENST00000526117 CYP2W1Q8TAV3 490 aa19.64■□□□□ 0.73
LMX1B-203ENST00000526117 LENG9Q96B70 501 aa19.64■□□□□ 0.73
LMX1B-203ENST00000526117 MBOAT7Q96N66 472 aa19.64■□□□□ 0.73
LMX1B-203ENST00000526117 KATNAL1Q9BW62 490 aa19.64■□□□□ 0.73
LMX1B-203ENST00000526117 AGO4Q9HCK5 861 aaKnown RBP19.64■□□□□ 0.73
LMX1B-203ENST00000526117 GJB4Q9NTQ9 266 aa19.64■□□□□ 0.73
LMX1B-203ENST00000526117 GRIN2DO15399 1336 aa19.63■□□□□ 0.73
LMX1B-203ENST00000526117 MYL3P08590 195 aa19.63■□□□□ 0.73
LMX1B-203ENST00000526117 TRIM60Q495X7 471 aa19.63■□□□□ 0.73
LMX1B-203ENST00000526117 Q4G0T1 1027 aa19.63■□□□□ 0.73
LMX1B-203ENST00000526117 NFRKBQ6P4R8 1299 aa19.63■□□□□ 0.73
LMX1B-203ENST00000526117 SESTD1Q86VW0 696 aa19.63■□□□□ 0.73
LMX1B-203ENST00000526117 FBXO18Q8NFZ0 1043 aa19.63■□□□□ 0.73
LMX1B-203ENST00000526117 GPR20Q99678 358 aa19.63■□□□□ 0.73
LMX1B-203ENST00000526117 CCDC194A0A1B0GVG4 234 aa19.62■□□□□ 0.73
LMX1B-203ENST00000526117 HAS3O00219 553 aa19.62■□□□□ 0.73
LMX1B-203ENST00000526117 ARP10275 920 aa19.62■□□□□ 0.73
LMX1B-203ENST00000526117 PRPF38BQ5VTL8 546 aaKnown RBP19.62■□□□□ 0.73
LMX1B-203ENST00000526117 PPP4R3AQ6IN85 833 aa19.62■□□□□ 0.73
LMX1B-203ENST00000526117 PLA2G4DQ86XP0 818 aa19.62■□□□□ 0.73
LMX1B-203ENST00000526117 OXER1Q8TDS5 423 aa19.62■□□□□ 0.73
LMX1B-203ENST00000526117 KAT2BQ92831 832 aa19.62■□□□□ 0.73
LMX1B-203ENST00000526117 SNX21Q969T3 373 aa19.62■□□□□ 0.73
LMX1B-203ENST00000526117 C8orf76Q96K31 380 aa19.62■□□□□ 0.73
LMX1B-203ENST00000526117 NAP1L4Q99733 375 aaKnown RBP19.62■□□□□ 0.73
LMX1B-203ENST00000526117 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.62■□□□□ 0.73
LMX1B-203ENST00000526117 IPO5O00410 1097 aaKnown RBP19.61■□□□□ 0.73
LMX1B-203ENST00000526117 NOP56O00567 594 aaKnown RBP19.61■□□□□ 0.73
LMX1B-203ENST00000526117 DTNBO60941 627 aa19.61■□□□□ 0.73
LMX1B-203ENST00000526117 GCFC2P16383 781 aaKnown RBP19.61■□□□□ 0.73
LMX1B-203ENST00000526117 FAM126BQ8IXS8 530 aa19.61■□□□□ 0.73
LMX1B-203ENST00000526117 DIS3L2Q8IYB7 885 aaKnown RBP19.61■□□□□ 0.73
LMX1B-203ENST00000526117 C7orf61Q8IZ16 206 aa19.61■□□□□ 0.73
LMX1B-203ENST00000526117 FAM184AQ8NB25 1140 aa19.61■□□□□ 0.73
LMX1B-203ENST00000526117 VTI1AQ96AJ9 217 aa19.61■□□□□ 0.73
LMX1B-203ENST00000526117 SDF4Q9BRK5 362 aa19.61■□□□□ 0.73
LMX1B-203ENST00000526117 C16orf70Q9BSU1 422 aa19.61■□□□□ 0.73
LMX1B-203ENST00000526117 BCAS3Q9H6U6 928 aa19.61■□□□□ 0.73
LMX1B-203ENST00000526117 JPH1Q9HDC5 661 aaPredicted RBP19.61■□□□□ 0.73
LMX1B-203ENST00000526117 TBC1D22BQ9NU19 505 aa19.61■□□□□ 0.73
LMX1B-203ENST00000526117 ATP11BQ9Y2G3 1177 aa19.61■□□□□ 0.73
LMX1B-203ENST00000526117 DCDC2CA8MYV0 355 aa19.6■□□□□ 0.73
LMX1B-203ENST00000526117 DHX15O43143 795 aaKnown RBP19.6■□□□□ 0.73
LMX1B-203ENST00000526117 CD4P01730 458 aa19.6■□□□□ 0.73
LMX1B-203ENST00000526117 TLE2Q04725 743 aa19.6■□□□□ 0.73
LMX1B-203ENST00000526117 ITGB3BPQ13352 177 aaPredicted RBP19.6■□□□□ 0.73
LMX1B-203ENST00000526117 SAFBQ15424 915 aaKnown RBP eCLIP19.6■□□□□ 0.73
LMX1B-203ENST00000526117 NEK8Q86SG6 692 aa19.6■□□□□ 0.73
LMX1B-203ENST00000526117 SEPT1Q8WYJ6 367 aa19.6■□□□□ 0.73
LMX1B-203ENST00000526117 FOXP1Q9H334 677 aaPredicted RBP19.6■□□□□ 0.73
LMX1B-203ENST00000526117 SLC9A2Q9UBY0 812 aa19.6■□□□□ 0.73
LMX1B-203ENST00000526117 EMSYQ7Z589 1322 aa19.59■□□□□ 0.73
LMX1B-203ENST00000526117 DOCK5Q9H7D0 1870 aa19.59■□□□□ 0.73
LMX1B-203ENST00000526117 TLR3O15455 904 aaKnown RBP19.59■□□□□ 0.73
LMX1B-203ENST00000526117 ATG7O95352 703 aa19.59■□□□□ 0.73
LMX1B-203ENST00000526117 LGALS2P05162 132 aa19.59■□□□□ 0.73
LMX1B-203ENST00000526117 CLTBP09497 229 aa19.59■□□□□ 0.73
LMX1B-203ENST00000526117 FAAP100Q0VG06 881 aa19.59■□□□□ 0.73
LMX1B-203ENST00000526117 NR5A1Q13285 461 aa19.59■□□□□ 0.73
LMX1B-203ENST00000526117 INF2Q27J81 1249 aa19.59■□□□□ 0.73
LMX1B-203ENST00000526117 NBPF20Q3BBV1 942 aa19.59■□□□□ 0.73
LMX1B-203ENST00000526117 PRR16Q569H4 304 aa19.59■□□□□ 0.73
LMX1B-203ENST00000526117 RIT2Q99578 217 aa19.59■□□□□ 0.73
LMX1B-203ENST00000526117 ZNF577Q9BSK1 485 aa19.59■□□□□ 0.73
LMX1B-203ENST00000526117 PDLIM7Q9NR12 457 aa19.59■□□□□ 0.73
LMX1B-203ENST00000526117 BTBD18B2RXH4 712 aa19.58■□□□□ 0.72
LMX1B-203ENST00000526117 KIAA0355O15063 1070 aa19.58■□□□□ 0.72
LMX1B-203ENST00000526117 PQBP1O60828 265 aaKnown RBP19.58■□□□□ 0.72
LMX1B-203ENST00000526117 LGR5O75473 907 aa19.58■□□□□ 0.72
LMX1B-203ENST00000526117 HOXC8P31273 242 aa19.58■□□□□ 0.72
LMX1B-203ENST00000526117 PSMC6P62333 389 aa19.58■□□□□ 0.72
LMX1B-203ENST00000526117 PIK3AP1Q6ZUJ8 805 aa19.58■□□□□ 0.72
LMX1B-203ENST00000526117 SLC5A5Q92911 643 aa19.58■□□□□ 0.72
LMX1B-203ENST00000526117 INTS4Q96HW7 963 aaKnown RBP19.58■□□□□ 0.72
LMX1B-203ENST00000526117 TBX21Q9UL17 535 aa19.58■□□□□ 0.72
LMX1B-203ENST00000526117 LTBP2Q14767 1821 aa19.58■□□□□ 0.72
LMX1B-203ENST00000526117 GSTTP1A0A1W2PQM5 241 aa19.57■□□□□ 0.72
LMX1B-203ENST00000526117 H0YGN5 161 aa19.57■□□□□ 0.72
LMX1B-203ENST00000526117 H3BRB1 525 aa19.57■□□□□ 0.72
LMX1B-203ENST00000526117 MSH4O15457 936 aa19.57■□□□□ 0.72
LMX1B-203ENST00000526117 SUPT20HL2P0C7V6 817 aa19.57■□□□□ 0.72
LMX1B-203ENST00000526117 PSEN2P49810 448 aa19.57■□□□□ 0.72
LMX1B-203ENST00000526117 MFSD10Q14728 455 aa19.57■□□□□ 0.72
LMX1B-203ENST00000526117 EARS2Q5JPH6 523 aaKnown RBP19.57■□□□□ 0.72
LMX1B-203ENST00000526117 ZNF746Q6NUN9 644 aaPredicted RBP19.57■□□□□ 0.72
LMX1B-203ENST00000526117 ETNPPLQ8TBG4 499 aa19.57■□□□□ 0.72
LMX1B-203ENST00000526117 TUT1Q9H6E5 874 aaKnown RBP19.57■□□□□ 0.72
LMX1B-203ENST00000526117 ZNF215Q9UL58 517 aaPredicted RBP19.57■□□□□ 0.72
LMX1B-203ENST00000526117 IGKV6D-21A0A0A0MT36 114 aa19.56■□□□□ 0.72
LMX1B-203ENST00000526117 K7ELQ4 463 aaPredicted RBP19.56■□□□□ 0.72
LMX1B-203ENST00000526117 TBX3O15119 743 aa19.56■□□□□ 0.72
LMX1B-203ENST00000526117 TDP2O95551 362 aa19.56■□□□□ 0.72
LMX1B-203ENST00000526117 ZNF286BP0CG31 522 aa19.56■□□□□ 0.72
LMX1B-203ENST00000526117 U2AF2P26368 475 aaKnown RBP eCLIP19.56■□□□□ 0.72
LMX1B-203ENST00000526117 GJB2P29033 226 aa19.56■□□□□ 0.72
LMX1B-203ENST00000526117 TCF7P36402 384 aaPredicted RBP19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms