RNA–Protein interactions for RNA: ENST00000524292.5

CTNNA1-242, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-242ENST00000524292 OTOP2Q7RTS6 562 aa9.84□□□□□ -0.83
CTNNA1-242ENST00000524292 CTCFLQ8NI51 663 aaPredicted RBP9.84□□□□□ -0.83
CTNNA1-242ENST00000524292 MAP4K1Q92918 833 aa9.84□□□□□ -0.83
CTNNA1-242ENST00000524292 EMID1Q96A84 441 aaPredicted RBP9.84□□□□□ -0.83
CTNNA1-242ENST00000524292 KATNAL1Q9BW62 490 aa9.84□□□□□ -0.83
CTNNA1-242ENST00000524292 PBX4Q9BYU1 374 aa9.84□□□□□ -0.83
CTNNA1-242ENST00000524292 RBM8AQ9Y5S9 174 aaKnown RBP9.84□□□□□ -0.83
CTNNA1-242ENST00000524292 SLC4A7Q9Y6M7 1214 aa9.84□□□□□ -0.83
CTNNA1-242ENST00000524292 SCN10AQ9Y5Y9 1956 aa9.84□□□□□ -0.83
CTNNA1-242ENST00000524292 OPLAHO14841 1288 aa9.83□□□□□ -0.84
CTNNA1-242ENST00000524292 PPP1R11O60927 126 aaPredicted RBP9.83□□□□□ -0.84
CTNNA1-242ENST00000524292 DDAH1O94760 285 aa9.83□□□□□ -0.84
CTNNA1-242ENST00000524292 MYCLP12524 364 aaPredicted RBP9.83□□□□□ -0.84
CTNNA1-242ENST00000524292 ACTN1P12814 892 aa9.83□□□□□ -0.84
CTNNA1-242ENST00000524292 CCND2P30279 289 aa9.83□□□□□ -0.84
CTNNA1-242ENST00000524292 HOXA13P31271 388 aaPredicted RBP9.83□□□□□ -0.84
CTNNA1-242ENST00000524292 ARHGAP1Q07960 439 aa9.83□□□□□ -0.84
CTNNA1-242ENST00000524292 TROAPQ12815 778 aa9.83□□□□□ -0.84
CTNNA1-242ENST00000524292 LAMC2Q13753 1193 aa9.83□□□□□ -0.84
CTNNA1-242ENST00000524292 NFXL1Q6ZNB6 911 aa9.83□□□□□ -0.84
CTNNA1-242ENST00000524292 STOX1Q6ZVD7 989 aa9.83□□□□□ -0.84
CTNNA1-242ENST00000524292 DHX37Q8IY37 1157 aaKnown RBP9.83□□□□□ -0.84
CTNNA1-242ENST00000524292 PPTC7Q8NI37 304 aa9.83□□□□□ -0.84
CTNNA1-242ENST00000524292 SCLYQ96I15 445 aa9.83□□□□□ -0.84
CTNNA1-242ENST00000524292 PIGSQ96S52 555 aa9.83□□□□□ -0.84
CTNNA1-242ENST00000524292 GAS2L1Q99501 681 aaPredicted RBP9.83□□□□□ -0.84
CTNNA1-242ENST00000524292 PDCD2LQ9BRP1 358 aa9.83□□□□□ -0.84
CTNNA1-242ENST00000524292 MTA3Q9BTC8 594 aa9.83□□□□□ -0.84
CTNNA1-242ENST00000524292 RIOX1Q9H6W3 641 aa9.83□□□□□ -0.84
CTNNA1-242ENST00000524292 SEC63Q9UGP8 760 aaKnown RBP9.83□□□□□ -0.84
CTNNA1-242ENST00000524292 EYSQ5T1H1 3165 aa9.83□□□□□ -0.84
CTNNA1-242ENST00000524292 CCDC69A6NI79 296 aa9.82□□□□□ -0.84
CTNNA1-242ENST00000524292 GRXCR1A8MXD5 290 aa9.82□□□□□ -0.84
CTNNA1-242ENST00000524292 PRC1O43663 620 aa9.82□□□□□ -0.84
CTNNA1-242ENST00000524292 TGFB3P10600 412 aa9.82□□□□□ -0.84
CTNNA1-242ENST00000524292 ATP2A2P16615 1042 aaKnown RBP9.82□□□□□ -0.84
CTNNA1-242ENST00000524292 MCM5P33992 734 aa9.82□□□□□ -0.84
CTNNA1-242ENST00000524292 GNAQP50148 359 aa9.82□□□□□ -0.84
CTNNA1-242ENST00000524292 GRIN2CQ14957 1233 aa9.82□□□□□ -0.84
CTNNA1-242ENST00000524292 PGM5Q15124 567 aa9.82□□□□□ -0.84
CTNNA1-242ENST00000524292 PTGISQ16647 500 aa9.82□□□□□ -0.84
CTNNA1-242ENST00000524292 GNPTABQ3T906 1256 aa9.82□□□□□ -0.84
CTNNA1-242ENST00000524292 DEFB128Q7Z7B8 93 aa9.82□□□□□ -0.84
CTNNA1-242ENST00000524292 SESTD1Q86VW0 696 aa9.82□□□□□ -0.84
CTNNA1-242ENST00000524292 FCHSD1Q86WN1 690 aa9.82□□□□□ -0.84
CTNNA1-242ENST00000524292 MB21D2Q8IYB1 491 aaPredicted RBP9.82□□□□□ -0.84
CTNNA1-242ENST00000524292 ZNF654Q8IZM8 581 aa9.82□□□□□ -0.84
CTNNA1-242ENST00000524292 TMTC2Q8N394 836 aa9.82□□□□□ -0.84
CTNNA1-242ENST00000524292 C7orf31Q8N865 590 aa9.82□□□□□ -0.84
CTNNA1-242ENST00000524292 CAGE1Q8TC20 777 aa9.82□□□□□ -0.84
CTNNA1-242ENST00000524292 PIBF1Q8WXW3 757 aa9.82□□□□□ -0.84
CTNNA1-242ENST00000524292 RRP36Q96EU6 259 aaKnown RBP9.82□□□□□ -0.84
CTNNA1-242ENST00000524292 TMEM87BQ96K49 555 aa9.82□□□□□ -0.84
CTNNA1-242ENST00000524292 MAP3K14Q99558 947 aa9.82□□□□□ -0.84
CTNNA1-242ENST00000524292 LZTS2Q9BRK4 669 aa9.82□□□□□ -0.84
CTNNA1-242ENST00000524292 FTOQ9C0B1 505 aaKnown RBP eCLIP9.82□□□□□ -0.84
CTNNA1-242ENST00000524292 SLC28A3Q9HAS3 691 aa9.82□□□□□ -0.84
CTNNA1-242ENST00000524292 SENP2Q9HC62 589 aa9.82□□□□□ -0.84
CTNNA1-242ENST00000524292 CXXC1Q9P0U4 656 aaPredicted RBP9.82□□□□□ -0.84
CTNNA1-242ENST00000524292 DDX41Q9UJV9 622 aaKnown RBP9.82□□□□□ -0.84
CTNNA1-242ENST00000524292 TAF6LQ9Y6J9 622 aa9.82□□□□□ -0.84
CTNNA1-242ENST00000524292 KIAA1217Q5T5P2 1943 aa9.82□□□□□ -0.84
CTNNA1-242ENST00000524292 PRUNE2Q8WUY3 3088 aa9.81□□□□□ -0.84
CTNNA1-242ENST00000524292 CYTH3O43739 400 aa9.81□□□□□ -0.84
CTNNA1-242ENST00000524292 STAM2O75886 525 aa9.81□□□□□ -0.84
CTNNA1-242ENST00000524292 IQCF3P0C7M6 154 aa9.81□□□□□ -0.84
CTNNA1-242ENST00000524292 CALM1P0DP23 149 aa9.81□□□□□ -0.84
CTNNA1-242ENST00000524292 CALM2P0DP24 149 aa9.81□□□□□ -0.84
CTNNA1-242ENST00000524292 CALM3P0DP25 149 aa9.81□□□□□ -0.84
CTNNA1-242ENST00000524292 ANTXR2P58335 489 aa9.81□□□□□ -0.84
CTNNA1-242ENST00000524292 CELF3Q5SZQ8 465 aaKnown RBP9.81□□□□□ -0.84
CTNNA1-242ENST00000524292 RNF20Q5VTR2 975 aa9.81□□□□□ -0.84
CTNNA1-242ENST00000524292 VSIG10LQ86VR7 867 aa9.81□□□□□ -0.84
CTNNA1-242ENST00000524292 IGDCC4Q8TDY8 1250 aa9.81□□□□□ -0.84
CTNNA1-242ENST00000524292 AFAP1L1Q8TED9 768 aa9.81□□□□□ -0.84
CTNNA1-242ENST00000524292 PPP1R13LQ8WUF5 828 aa9.81□□□□□ -0.84
CTNNA1-242ENST00000524292 CUL5Q93034 780 aa9.81□□□□□ -0.84
CTNNA1-242ENST00000524292 SPATA33Q96N06 139 aa9.81□□□□□ -0.84
CTNNA1-242ENST00000524292 PHOX2BQ99453 314 aa9.81□□□□□ -0.84
CTNNA1-242ENST00000524292 ESYT1Q9BSJ8 1104 aa9.81□□□□□ -0.84
CTNNA1-242ENST00000524292 SPZ1Q9BXG8 430 aa9.81□□□□□ -0.84
CTNNA1-242ENST00000524292 LY9Q9HBG7 655 aa9.81□□□□□ -0.84
CTNNA1-242ENST00000524292 ANO2Q9NQ90 1003 aa9.81□□□□□ -0.84
CTNNA1-242ENST00000524292 PCDHA11Q9Y5I1 949 aa9.81□□□□□ -0.84
CTNNA1-242ENST00000524292 BAZ2BQ9UIF8 2168 aaKnown RBP9.8□□□□□ -0.84
CTNNA1-242ENST00000524292 NOP56O00567 594 aaKnown RBP9.8□□□□□ -0.84
CTNNA1-242ENST00000524292 SLC27A2O14975 620 aa9.8□□□□□ -0.84
CTNNA1-242ENST00000524292 PPFIA4O75335 1185 aa9.8□□□□□ -0.84
CTNNA1-242ENST00000524292 ZMYND10O75800 440 aa9.8□□□□□ -0.84
CTNNA1-242ENST00000524292 PARNO95453 639 aaKnown RBP9.8□□□□□ -0.84
CTNNA1-242ENST00000524292 GGPS1O95749 300 aa9.8□□□□□ -0.84
CTNNA1-242ENST00000524292 F2P00734 622 aa9.8□□□□□ -0.84
CTNNA1-242ENST00000524292 ZNF286BP0CG31 522 aa9.8□□□□□ -0.84
CTNNA1-242ENST00000524292 UBA1P22314 1058 aaKnown RBP9.8□□□□□ -0.84
CTNNA1-242ENST00000524292 SMARCA1P28370 1054 aa9.8□□□□□ -0.84
CTNNA1-242ENST00000524292 KIAA0753Q2KHM9 967 aa9.8□□□□□ -0.84
CTNNA1-242ENST00000524292 SLC35G1Q2M3R5 365 aa9.8□□□□□ -0.84
CTNNA1-242ENST00000524292 MYSM1Q5VVJ2 828 aa9.8□□□□□ -0.84
CTNNA1-242ENST00000524292 PPP2R2DQ66LE6 453 aa9.8□□□□□ -0.84
CTNNA1-242ENST00000524292 GDF6Q6KF10 455 aaPredicted RBP9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 119.7 ms