RNA–Protein interactions for RNA: ENST00000524258.2

CLN8-207, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 2

Gene CLN8, Length 835 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-207ENST00000524258 EHMT1Q9H9B1 1298 aa13.65□□□□□ -0.22
CLN8-207ENST00000524258 ZMYND8Q9ULU4 1186 aaPredicted RBP13.65□□□□□ -0.22
CLN8-207ENST00000524258 ATP11BQ9Y2G3 1177 aa13.65□□□□□ -0.22
CLN8-207ENST00000524258 NR2E3Q9Y5X4 410 aa13.65□□□□□ -0.22
CLN8-207ENST00000524258 MYL3P08590 195 aa13.64□□□□□ -0.23
CLN8-207ENST00000524258 MTMR1Q13613 665 aa13.64□□□□□ -0.23
CLN8-207ENST00000524258 NEDD9Q14511 834 aa13.64□□□□□ -0.23
CLN8-207ENST00000524258 NBPF20Q3BBV1 942 aa13.64□□□□□ -0.23
CLN8-207ENST00000524258 TMX3Q96JJ7 454 aa13.64□□□□□ -0.23
CLN8-207ENST00000524258 SPATA33Q96N06 139 aa13.64□□□□□ -0.23
CLN8-207ENST00000524258 MBOAT7Q96N66 472 aa13.64□□□□□ -0.23
CLN8-207ENST00000524258 CTAGE1Q96RT6 745 aa13.64□□□□□ -0.23
CLN8-207ENST00000524258 GPR20Q99678 358 aa13.64□□□□□ -0.23
CLN8-207ENST00000524258 GDF15Q99988 308 aa13.64□□□□□ -0.23
CLN8-207ENST00000524258 AGO4Q9HCK5 861 aaKnown RBP13.64□□□□□ -0.23
CLN8-207ENST00000524258 TBX21Q9UL17 535 aa13.64□□□□□ -0.23
CLN8-207ENST00000524258 CYP3A7-CYP3A51PA0A087WV96 503 aa13.63□□□□□ -0.23
CLN8-207ENST00000524258 GSTTP1A0A1W2PQM5 241 aa13.63□□□□□ -0.23
CLN8-207ENST00000524258 KIAA0355O15063 1070 aa13.63□□□□□ -0.23
CLN8-207ENST00000524258 F2P00734 622 aa13.63□□□□□ -0.23
CLN8-207ENST00000524258 SYN1P17600 705 aa13.63□□□□□ -0.23
CLN8-207ENST00000524258 CYP3A7P24462 503 aa13.63□□□□□ -0.23
CLN8-207ENST00000524258 USP11P51784 963 aa13.63□□□□□ -0.23
CLN8-207ENST00000524258 HIC1Q14526 733 aa13.63□□□□□ -0.23
CLN8-207ENST00000524258 DGKDQ16760 1214 aa13.63□□□□□ -0.23
CLN8-207ENST00000524258 TBCKQ8TEA7 893 aa13.63□□□□□ -0.23
CLN8-207ENST00000524258 PPP1R13LQ8WUF5 828 aa13.63□□□□□ -0.23
CLN8-207ENST00000524258 CDHR1Q96JP9 859 aa13.63□□□□□ -0.23
CLN8-207ENST00000524258 SEZ6LQ9BYH1 1024 aa13.63□□□□□ -0.23
CLN8-207ENST00000524258 NFASCO94856 1347 aa13.63□□□□□ -0.23
CLN8-207ENST00000524258 MYH7BA7E2Y1 1941 aa13.62□□□□□ -0.23
CLN8-207ENST00000524258 FAM205CA6NFA0 338 aa13.62□□□□□ -0.23
CLN8-207ENST00000524258 ST18O60284 1047 aa13.62□□□□□ -0.23
CLN8-207ENST00000524258 PQBP1O60828 265 aaKnown RBP13.62□□□□□ -0.23
CLN8-207ENST00000524258 HOXC8P31273 242 aa13.62□□□□□ -0.23
CLN8-207ENST00000524258 NR5A1Q13285 461 aa13.62□□□□□ -0.23
CLN8-207ENST00000524258 BRDTQ58F21 947 aaPredicted RBP13.62□□□□□ -0.23
CLN8-207ENST00000524258 KRT40Q6A162 431 aa13.62□□□□□ -0.23
CLN8-207ENST00000524258 NFRKBQ6P4R8 1299 aa13.62□□□□□ -0.23
CLN8-207ENST00000524258 SESTD1Q86VW0 696 aa13.62□□□□□ -0.23
CLN8-207ENST00000524258 WASF1Q92558 559 aa13.62□□□□□ -0.23
CLN8-207ENST00000524258 PCYT2Q99447 389 aa13.62□□□□□ -0.23
CLN8-207ENST00000524258 TRPV6Q9H1D0 765 aa13.62□□□□□ -0.23
CLN8-207ENST00000524258 MLXIPQ9HAP2 919 aa13.62□□□□□ -0.23
CLN8-207ENST00000524258 TRIOBPQ9H2D6 2365 aa13.61□□□□□ -0.23
CLN8-207ENST00000524258 B4GALT4O60513 344 aa13.61□□□□□ -0.23
CLN8-207ENST00000524258 ATG7O95352 703 aa13.61□□□□□ -0.23
CLN8-207ENST00000524258 CCNE2O96020 404 aa13.61□□□□□ -0.23
CLN8-207ENST00000524258 MMP1P03956 469 aa13.61□□□□□ -0.23
CLN8-207ENST00000524258 LGALS2P05162 132 aa13.61□□□□□ -0.23
CLN8-207ENST00000524258 CLTBP09497 229 aa13.61□□□□□ -0.23
CLN8-207ENST00000524258 ZNF286BP0CG31 522 aa13.61□□□□□ -0.23
CLN8-207ENST00000524258 PSEN2P49810 448 aa13.61□□□□□ -0.23
CLN8-207ENST00000524258 KRT25Q7Z3Z0 450 aa13.61□□□□□ -0.23
CLN8-207ENST00000524258 PLA2G4DQ86XP0 818 aa13.61□□□□□ -0.23
CLN8-207ENST00000524258 GIMAP8Q8ND71 665 aaPredicted RBP13.61□□□□□ -0.23
CLN8-207ENST00000524258 VTI1AQ96AJ9 217 aa13.61□□□□□ -0.23
CLN8-207ENST00000524258 VWCEQ96DN2 955 aa13.61□□□□□ -0.23
CLN8-207ENST00000524258 IGKV6D-21A0A0A0MT36 114 aa13.6□□□□□ -0.23
CLN8-207ENST00000524258 DCDC2CA8MYV0 355 aa13.6□□□□□ -0.23
CLN8-207ENST00000524258 BTBD18B2RXH4 712 aa13.6□□□□□ -0.23
CLN8-207ENST00000524258 WNT7AO00755 349 aa13.6□□□□□ -0.23
CLN8-207ENST00000524258 MSH4O15457 936 aa13.6□□□□□ -0.23
CLN8-207ENST00000524258 LGR5O75473 907 aa13.6□□□□□ -0.23
CLN8-207ENST00000524258 TDP2O95551 362 aa13.6□□□□□ -0.23
CLN8-207ENST00000524258 MAGEA10P43363 369 aaPredicted RBP13.6□□□□□ -0.23
CLN8-207ENST00000524258 MCM2P49736 904 aa13.6□□□□□ -0.23
CLN8-207ENST00000524258 PTPN11Q06124 597 aaPredicted RBP13.6□□□□□ -0.23
CLN8-207ENST00000524258 CUL4AQ13619 759 aa13.6□□□□□ -0.23
CLN8-207ENST00000524258 NONOQ15233 471 aaKnown RBP eCLIP13.6□□□□□ -0.23
CLN8-207ENST00000524258 INF2Q27J81 1249 aa13.6□□□□□ -0.23
CLN8-207ENST00000524258 Q4G0T1 1027 aa13.6□□□□□ -0.23
CLN8-207ENST00000524258 MOXD1Q6UVY6 613 aa13.6□□□□□ -0.23
CLN8-207ENST00000524258 B3GNT9Q6UX72 402 aa13.6□□□□□ -0.23
CLN8-207ENST00000524258 FBXO18Q8NFZ0 1043 aa13.6□□□□□ -0.23
CLN8-207ENST00000524258 SEPT1Q8WYJ6 367 aa13.6□□□□□ -0.23
CLN8-207ENST00000524258 DOCK5Q9H7D0 1870 aa13.6□□□□□ -0.23
CLN8-207ENST00000524258 TRMT13Q9NUP7 481 aaKnown RBP13.6□□□□□ -0.23
CLN8-207ENST00000524258 PKD2L1Q9P0L9 805 aa13.6□□□□□ -0.23
CLN8-207ENST00000524258 MROH7Q68CQ1 1323 aa13.6□□□□□ -0.23
CLN8-207ENST00000524258 LAMA3Q16787 3333 aa13.59□□□□□ -0.23
CLN8-207ENST00000524258 IPO5O00410 1097 aaKnown RBP13.59□□□□□ -0.23
CLN8-207ENST00000524258 XBP1P17861 261 aa13.59□□□□□ -0.23
CLN8-207ENST00000524258 BMP8BP34820 402 aa13.59□□□□□ -0.23
CLN8-207ENST00000524258 ZNF76P36508 570 aa13.59□□□□□ -0.23
CLN8-207ENST00000524258 ADAM17P78536 824 aa13.59□□□□□ -0.23
CLN8-207ENST00000524258 HMGN5P82970 282 aaKnown RBP13.59□□□□□ -0.23
CLN8-207ENST00000524258 MFSD10Q14728 455 aa13.59□□□□□ -0.23
CLN8-207ENST00000524258 KIAA0753Q2KHM9 967 aa13.59□□□□□ -0.23
CLN8-207ENST00000524258 PRR16Q569H4 304 aa13.59□□□□□ -0.23
CLN8-207ENST00000524258 GDF6Q6KF10 455 aaPredicted RBP13.59□□□□□ -0.23
CLN8-207ENST00000524258 ABHD15Q6UXT9 468 aa13.59□□□□□ -0.23
CLN8-207ENST00000524258 TRIM50Q86XT4 487 aa13.59□□□□□ -0.23
CLN8-207ENST00000524258 ETNPPLQ8TBG4 499 aa13.59□□□□□ -0.23
CLN8-207ENST00000524258 SLC5A5Q92911 643 aa13.59□□□□□ -0.23
CLN8-207ENST00000524258 UIMC1Q96RL1 719 aa13.59□□□□□ -0.23
CLN8-207ENST00000524258 HDAC6Q9UBN7 1215 aa13.59□□□□□ -0.23
CLN8-207ENST00000524258 SLC9A2Q9UBY0 812 aa13.59□□□□□ -0.23
CLN8-207ENST00000524258 COLQQ9Y215 455 aaPredicted RBP13.59□□□□□ -0.23
CLN8-207ENST00000524258 H3BRB1 525 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms