RNA–Protein interactions for RNA: ENST00000523555.5

PABPC1-222, Transcript of poly(A) binding protein cytoplasmic 1, human

TSL 3

Gene PABPC1, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PABPC1-222	ENST00000523555	LOXHD1	Q8IVV2	1947 aa		10.9	□□□□□ -0.66
PABPC1-222	ENST00000523555	hCG_1984214	I3L0E3	225 aa		10.9	□□□□□ -0.66
PABPC1-222	ENST00000523555	KPNA6	O60684	536 aa		10.9	□□□□□ -0.66
PABPC1-222	ENST00000523555	CTDNEP1	O95476	244 aa		10.9	□□□□□ -0.66
PABPC1-222	ENST00000523555	LGALS2	P05162	132 aa		10.9	□□□□□ -0.66
PABPC1-222	ENST00000523555	AR	P10275	920 aa		10.9	□□□□□ -0.66
PABPC1-222	ENST00000523555	ANAPC15	P60006	121 aa		10.9	□□□□□ -0.66
PABPC1-222	ENST00000523555	MFSD10	Q14728	455 aa		10.9	□□□□□ -0.66
PABPC1-222	ENST00000523555	KIAA0753	Q2KHM9	967 aa		10.9	□□□□□ -0.66
PABPC1-222	ENST00000523555	LRIT3	Q3SXY7	679 aa		10.9	□□□□□ -0.66
PABPC1-222	ENST00000523555	NFRKB	Q6P4R8	1299 aa		10.9	□□□□□ -0.66
PABPC1-222	ENST00000523555	KCNV1	Q6PIU1	500 aa		10.9	□□□□□ -0.66
PABPC1-222	ENST00000523555	METTL7B	Q6UX53	244 aa		10.9	□□□□□ -0.66
PABPC1-222	ENST00000523555	ZNF713	Q8N859	430 aa	Predicted RBP	10.9	□□□□□ -0.66
PABPC1-222	ENST00000523555	CRYGN	Q8WXF5	182 aa		10.9	□□□□□ -0.66
PABPC1-222	ENST00000523555	DHX38	Q92620	1227 aa	Known RBP	10.9	□□□□□ -0.66
PABPC1-222	ENST00000523555	WNT8B	Q93098	351 aa		10.9	□□□□□ -0.66
PABPC1-222	ENST00000523555	UIMC1	Q96RL1	719 aa		10.9	□□□□□ -0.66
PABPC1-222	ENST00000523555	GPR20	Q99678	358 aa		10.9	□□□□□ -0.66
PABPC1-222	ENST00000523555	ZMYND12	Q9H0C1	365 aa		10.9	□□□□□ -0.66
PABPC1-222	ENST00000523555	JADE2	Q9NQC1	790 aa		10.9	□□□□□ -0.66
PABPC1-222	ENST00000523555	ESYT2	A0FGR8	921 aa		10.89	□□□□□ -0.67
PABPC1-222	ENST00000523555	SREBF1	P36956	1147 aa		10.89	□□□□□ -0.67
PABPC1-222	ENST00000523555	ST3GAL1	Q11201	340 aa		10.89	□□□□□ -0.67
PABPC1-222	ENST00000523555	MTMR1	Q13613	665 aa		10.89	□□□□□ -0.67
PABPC1-222	ENST00000523555	NPY5R	Q15761	445 aa		10.89	□□□□□ -0.67
PABPC1-222	ENST00000523555	ME3	Q16798	604 aa		10.89	□□□□□ -0.67
PABPC1-222	ENST00000523555	TMEM240	Q5SV17	173 aa		10.89	□□□□□ -0.67
PABPC1-222	ENST00000523555	FAM109B	Q6ICB4	259 aa	Predicted RBP	10.89	□□□□□ -0.67
PABPC1-222	ENST00000523555	XRRA1	Q6P2D8	792 aa		10.89	□□□□□ -0.67
PABPC1-222	ENST00000523555		Q7L0L9	218 aa		10.89	□□□□□ -0.67
PABPC1-222	ENST00000523555	NLRX1	Q86UT6	975 aa		10.89	□□□□□ -0.67
PABPC1-222	ENST00000523555	SESTD1	Q86VW0	696 aa		10.89	□□□□□ -0.67
PABPC1-222	ENST00000523555	NECAB1	Q8N987	351 aa		10.89	□□□□□ -0.67
PABPC1-222	ENST00000523555	GPRASP2	Q96D09	838 aa		10.89	□□□□□ -0.67
PABPC1-222	ENST00000523555	MXRA8	Q9BRK3	442 aa		10.89	□□□□□ -0.67
PABPC1-222	ENST00000523555	GJB4	Q9NTQ9	266 aa		10.89	□□□□□ -0.67
PABPC1-222	ENST00000523555	GTF2IRD1	Q9UHL9	959 aa		10.89	□□□□□ -0.67
PABPC1-222	ENST00000523555	MYH9	P35579	1960 aa	Known RBP	10.88	□□□□□ -0.67
PABPC1-222	ENST00000523555	GSTTP1	A0A1W2PQM5	241 aa		10.88	□□□□□ -0.67
PABPC1-222	ENST00000523555	FAM86B1	E9PN63	330 aa		10.88	□□□□□ -0.67
PABPC1-222	ENST00000523555	PFKFB2	O60825	505 aa		10.88	□□□□□ -0.67
PABPC1-222	ENST00000523555	PPFIA4	O75335	1185 aa		10.88	□□□□□ -0.67
PABPC1-222	ENST00000523555	FAM86B2	P0C5J1	330 aa		10.88	□□□□□ -0.67
PABPC1-222	ENST00000523555	ARHGAP4	P98171	946 aa		10.88	□□□□□ -0.67
PABPC1-222	ENST00000523555	PTPN11	Q06124	597 aa	Predicted RBP	10.88	□□□□□ -0.67
PABPC1-222	ENST00000523555	SSRP1	Q08945	709 aa	Known RBP	10.88	□□□□□ -0.67
PABPC1-222	ENST00000523555	ITGB3BP	Q13352	177 aa	Predicted RBP	10.88	□□□□□ -0.67
PABPC1-222	ENST00000523555	AP3B2	Q13367	1082 aa		10.88	□□□□□ -0.67
PABPC1-222	ENST00000523555	NEDD9	Q14511	834 aa		10.88	□□□□□ -0.67
PABPC1-222	ENST00000523555	PTGIS	Q16647	500 aa		10.88	□□□□□ -0.67
PABPC1-222	ENST00000523555	UTP14C	Q5TAP6	766 aa	Known RBP	10.88	□□□□□ -0.67
PABPC1-222	ENST00000523555	ZNF365	Q70YC5	407 aa		10.88	□□□□□ -0.67
PABPC1-222	ENST00000523555	KIF2C	Q99661	725 aa		10.88	□□□□□ -0.67
PABPC1-222	ENST00000523555	SENP7	Q9BQF6	1050 aa		10.88	□□□□□ -0.67
PABPC1-222	ENST00000523555	SEZ6L	Q9BYH1	1024 aa		10.88	□□□□□ -0.67
PABPC1-222	ENST00000523555	KCNH7	Q9NS40	1196 aa		10.88	□□□□□ -0.67
PABPC1-222	ENST00000523555	IGLV3-22	A0A075B6J6	115 aa		10.87	□□□□□ -0.67
PABPC1-222	ENST00000523555		H3BRB1	525 aa		10.87	□□□□□ -0.67
PABPC1-222	ENST00000523555	NOP56	O00567	594 aa	Known RBP	10.87	□□□□□ -0.67
PABPC1-222	ENST00000523555	FOS	P01100	380 aa	Predicted RBP	10.87	□□□□□ -0.67
PABPC1-222	ENST00000523555	TCF7	P36402	384 aa	Predicted RBP	10.87	□□□□□ -0.67
PABPC1-222	ENST00000523555	NEK4	P51957	841 aa		10.87	□□□□□ -0.67
PABPC1-222	ENST00000523555	AKAP17A	Q02040	695 aa	Known RBP	10.87	□□□□□ -0.67
PABPC1-222	ENST00000523555	PPIG	Q13427	754 aa	Known RBP eCLIP	10.87	□□□□□ -0.67
PABPC1-222	ENST00000523555	GPNMB	Q14956	572 aa		10.87	□□□□□ -0.67
PABPC1-222	ENST00000523555	CEP55	Q53EZ4	464 aa		10.87	□□□□□ -0.67
PABPC1-222	ENST00000523555	REXO1	Q8N1G1	1221 aa	Known RBP	10.87	□□□□□ -0.67
PABPC1-222	ENST00000523555	TMEM199	Q8N511	208 aa		10.87	□□□□□ -0.67
PABPC1-222	ENST00000523555	C7orf31	Q8N865	590 aa		10.87	□□□□□ -0.67
PABPC1-222	ENST00000523555	RNPC3	Q96LT9	517 aa	Known RBP	10.87	□□□□□ -0.67
PABPC1-222	ENST00000523555	PCYT2	Q99447	389 aa		10.87	□□□□□ -0.67
PABPC1-222	ENST00000523555	KATNAL1	Q9BW62	490 aa		10.87	□□□□□ -0.67
PABPC1-222	ENST00000523555	SLK	Q9H2G2	1235 aa	Predicted RBP	10.87	□□□□□ -0.67
PABPC1-222	ENST00000523555	TUT1	Q9H6E5	874 aa	Known RBP	10.87	□□□□□ -0.67
PABPC1-222	ENST00000523555	AGO4	Q9HCK5	861 aa	Known RBP	10.87	□□□□□ -0.67
PABPC1-222	ENST00000523555	C6orf50	Q9HD87	102 aa		10.87	□□□□□ -0.67
PABPC1-222	ENST00000523555	IL23A	Q9NPF7	189 aa		10.87	□□□□□ -0.67
PABPC1-222	ENST00000523555	CXXC1	Q9P0U4	656 aa	Predicted RBP	10.87	□□□□□ -0.67
PABPC1-222	ENST00000523555	KCNJ14	Q9UNX9	436 aa		10.87	□□□□□ -0.67
PABPC1-222	ENST00000523555	EVPL	Q92817	2033 aa		10.87	□□□□□ -0.67
PABPC1-222	ENST00000523555	MICAL3	Q7RTP6	2002 aa		10.86	□□□□□ -0.67
PABPC1-222	ENST00000523555	GRXCR1	A8MXD5	290 aa		10.86	□□□□□ -0.67
PABPC1-222	ENST00000523555		M0R2N6	131 aa		10.86	□□□□□ -0.67
PABPC1-222	ENST00000523555	DDX39A	O00148	427 aa	Known RBP	10.86	□□□□□ -0.67
PABPC1-222	ENST00000523555	MEIS1	O00470	390 aa		10.86	□□□□□ -0.67
PABPC1-222	ENST00000523555	CPLX1	O14810	134 aa		10.86	□□□□□ -0.67
PABPC1-222	ENST00000523555	DEXI	O95424	95 aa		10.86	□□□□□ -0.67
PABPC1-222	ENST00000523555	IQCF3	P0C7M6	154 aa		10.86	□□□□□ -0.67
PABPC1-222	ENST00000523555	SUPT20HL2	P0C7V6	817 aa		10.86	□□□□□ -0.67
PABPC1-222	ENST00000523555	SMIM10L2A	P0DMW4	78 aa		10.86	□□□□□ -0.67
PABPC1-222	ENST00000523555	SMIM10L2B	P0DMW5	78 aa		10.86	□□□□□ -0.67
PABPC1-222	ENST00000523555	FDPS	P14324	419 aa	Known RBP	10.86	□□□□□ -0.67
PABPC1-222	ENST00000523555	HOXC8	P31273	242 aa		10.86	□□□□□ -0.67
PABPC1-222	ENST00000523555	NLRP5	P59047	1200 aa		10.86	□□□□□ -0.67
PABPC1-222	ENST00000523555	TCTN1	Q2MV58	587 aa		10.86	□□□□□ -0.67
PABPC1-222	ENST00000523555	TRIM71	Q2Q1W2	868 aa	Known RBP	10.86	□□□□□ -0.67
PABPC1-222	ENST00000523555	RASIP1	Q5U651	963 aa		10.86	□□□□□ -0.67
PABPC1-222	ENST00000523555	TRAF7	Q6Q0C0	670 aa		10.86	□□□□□ -0.67
PABPC1-222	ENST00000523555	DEFB128	Q7Z7B8	93 aa		10.86	□□□□□ -0.67

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