RNA–Protein interactions for RNA: ENST00000523541.1

CCNC-213, Transcript of cyclin C, humanhuman

TSL 1 (best)

Gene CCNC, Length 1,123 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-213ENST00000523541 ESYT2A0FGR8 921 aa19.75■□□□□ 0.75
CCNC-213ENST00000523541 ZNF286BP0CG31 522 aa19.75■□□□□ 0.75
CCNC-213ENST00000523541 SCG2P13521 617 aa19.75■□□□□ 0.75
CCNC-213ENST00000523541 IFNAR1P17181 557 aa19.75■□□□□ 0.75
CCNC-213ENST00000523541 PDIA3P30101 505 aaKnown RBP19.75■□□□□ 0.75
CCNC-213ENST00000523541 KIAA0753Q2KHM9 967 aa19.75■□□□□ 0.75
CCNC-213ENST00000523541 DEFB128Q7Z7B8 93 aa19.75■□□□□ 0.75
CCNC-213ENST00000523541 HERVK_113Q902F9 699 aa19.75■□□□□ 0.75
CCNC-213ENST00000523541 C16orf70Q9BSU1 422 aa19.75■□□□□ 0.75
CCNC-213ENST00000523541 RNF26Q9BY78 433 aaPredicted RBP19.75■□□□□ 0.75
CCNC-213ENST00000523541 WNT8AQ9H1J5 351 aa19.75■□□□□ 0.75
CCNC-213ENST00000523541 SEMA6BQ9H3T3 888 aa19.75■□□□□ 0.75
CCNC-213ENST00000523541 JADE2Q9NQC1 790 aa19.75■□□□□ 0.75
CCNC-213ENST00000523541 H3BRB1 525 aa19.74■□□□□ 0.75
CCNC-213ENST00000523541 DNAJB2P25686 324 aa19.74■□□□□ 0.75
CCNC-213ENST00000523541 GNA11P29992 359 aa19.74■□□□□ 0.75
CCNC-213ENST00000523541 RBL2Q08999 1139 aa19.74■□□□□ 0.75
CCNC-213ENST00000523541 SEMA3FQ13275 785 aa19.74■□□□□ 0.75
CCNC-213ENST00000523541 UBE2SQ16763 222 aa19.74■□□□□ 0.75
CCNC-213ENST00000523541 CYFIP1Q7L576 1253 aa19.74■□□□□ 0.75
CCNC-213ENST00000523541 AFAP1L1Q8TED9 768 aa19.74■□□□□ 0.75
CCNC-213ENST00000523541 GUCD1Q96NT3 240 aa19.74■□□□□ 0.75
CCNC-213ENST00000523541 ZMYND12Q9H0C1 365 aa19.74■□□□□ 0.75
CCNC-213ENST00000523541 TUT1Q9H6E5 874 aaKnown RBP19.74■□□□□ 0.75
CCNC-213ENST00000523541 ITGB5P18084 799 aa19.73■□□□□ 0.75
CCNC-213ENST00000523541 CLK2P49760 499 aaKnown RBP19.73■□□□□ 0.75
CCNC-213ENST00000523541 PTK7Q13308 1070 aa19.73■□□□□ 0.75
CCNC-213ENST00000523541 MTMR1Q13613 665 aa19.73■□□□□ 0.75
CCNC-213ENST00000523541 NTRK3Q16288 839 aa19.73■□□□□ 0.75
CCNC-213ENST00000523541 GDF6Q6KF10 455 aaPredicted RBP19.73■□□□□ 0.75
CCNC-213ENST00000523541 TYW1BQ6NUM6 668 aa19.73■□□□□ 0.75
CCNC-213ENST00000523541 FAM177A1Q8N128 213 aaPredicted RBP19.73■□□□□ 0.75
CCNC-213ENST00000523541 TIFAQ96CG3 184 aa19.73■□□□□ 0.75
CCNC-213ENST00000523541 GPR20Q99678 358 aa19.73■□□□□ 0.75
CCNC-213ENST00000523541 FTOQ9C0B1 505 aaKnown RBP eCLIP19.73■□□□□ 0.75
CCNC-213ENST00000523541 C6orf50Q9HD87 102 aa19.73■□□□□ 0.75
CCNC-213ENST00000523541 HDAC6Q9UBN7 1215 aa19.73■□□□□ 0.75
CCNC-213ENST00000523541 GRXCR1A8MXD5 290 aa19.72■□□□□ 0.75
CCNC-213ENST00000523541 IQCF3P0C7M6 154 aa19.72■□□□□ 0.75
CCNC-213ENST00000523541 GNAT1P11488 350 aa19.72■□□□□ 0.75
CCNC-213ENST00000523541 ACTN1P12814 892 aa19.72■□□□□ 0.75
CCNC-213ENST00000523541 TOB2Q14106 344 aaPredicted RBP19.72■□□□□ 0.75
CCNC-213ENST00000523541 BICD2Q8TD16 824 aa19.72■□□□□ 0.75
CCNC-213ENST00000523541 CDX2Q99626 313 aaPredicted RBP19.72■□□□□ 0.75
CCNC-213ENST00000523541 MXRA8Q9BRK3 442 aa19.72■□□□□ 0.75
CCNC-213ENST00000523541 MSRAQ9UJ68 235 aa19.72■□□□□ 0.75
CCNC-213ENST00000523541 ZNF215Q9UL58 517 aaPredicted RBP19.72■□□□□ 0.75
CCNC-213ENST00000523541 MYH7BA7E2Y1 1941 aa19.71■□□□□ 0.75
CCNC-213ENST00000523541 LGALS2P05162 132 aa19.71■□□□□ 0.75
CCNC-213ENST00000523541 KCNA2P16389 499 aa19.71■□□□□ 0.75
CCNC-213ENST00000523541 SREBF1P36956 1147 aa19.71■□□□□ 0.75
CCNC-213ENST00000523541 PKN1Q16512 942 aa19.71■□□□□ 0.75
CCNC-213ENST00000523541 CEP55Q53EZ4 464 aa19.71■□□□□ 0.75
CCNC-213ENST00000523541 CPLX2Q6PUV4 134 aaKnown RBP19.71■□□□□ 0.75
CCNC-213ENST00000523541 NIPA1Q7RTP0 329 aa19.71■□□□□ 0.75
CCNC-213ENST00000523541 CCDC148Q8NFR7 591 aa19.71■□□□□ 0.75
CCNC-213ENST00000523541 MYLIPQ8WY64 445 aa19.71■□□□□ 0.75
CCNC-213ENST00000523541 SEPT1Q8WYJ6 367 aa19.71■□□□□ 0.75
CCNC-213ENST00000523541 IL17RAQ96F46 866 aa19.71■□□□□ 0.75
CCNC-213ENST00000523541 TTYH1Q9H313 450 aaPredicted RBP19.71■□□□□ 0.75
CCNC-213ENST00000523541 SH3GLB2Q9NR46 395 aa19.71■□□□□ 0.75
CCNC-213ENST00000523541 PDRG1Q9NUG6 133 aa19.71■□□□□ 0.75
CCNC-213ENST00000523541 SLC4A7Q9Y6M7 1214 aa19.71■□□□□ 0.75
CCNC-213ENST00000523541 FOSL2P15408 326 aa19.7■□□□□ 0.74
CCNC-213ENST00000523541 HOXC8P31273 242 aa19.7■□□□□ 0.74
CCNC-213ENST00000523541 SP4Q02446 784 aa19.7■□□□□ 0.74
CCNC-213ENST00000523541 RAB30Q15771 203 aa19.7■□□□□ 0.74
CCNC-213ENST00000523541 TRIM22Q8IYM9 498 aa19.7■□□□□ 0.74
CCNC-213ENST00000523541 TNPO1Q92973 898 aaKnown RBP19.7■□□□□ 0.74
CCNC-213ENST00000523541 CTAGE1Q96RT6 745 aa19.7■□□□□ 0.74
CCNC-213ENST00000523541 ANO3Q9BYT9 981 aa19.7■□□□□ 0.74
CCNC-213ENST00000523541 KCNH7Q9NS40 1196 aa19.7■□□□□ 0.74
CCNC-213ENST00000523541 CXXC1Q9P0U4 656 aaPredicted RBP19.7■□□□□ 0.74
CCNC-213ENST00000523541 MEIS1O00470 390 aa19.69■□□□□ 0.74
CCNC-213ENST00000523541 ATP9AO75110 1047 aa19.69■□□□□ 0.74
CCNC-213ENST00000523541 CYP3A4P08684 503 aa19.69■□□□□ 0.74
CCNC-213ENST00000523541 SELPP16109 830 aa19.69■□□□□ 0.74
CCNC-213ENST00000523541 PBX2P40425 430 aa19.69■□□□□ 0.74
CCNC-213ENST00000523541 ANKRD1Q15327 319 aa19.69■□□□□ 0.74
CCNC-213ENST00000523541 PBX4Q9BYU1 374 aa19.69■□□□□ 0.74
CCNC-213ENST00000523541 ZNF576Q9H609 170 aa19.69■□□□□ 0.74
CCNC-213ENST00000523541 BCAS3Q9H6U6 928 aa19.69■□□□□ 0.74
CCNC-213ENST00000523541 NFASCO94856 1347 aa19.69■□□□□ 0.74
CCNC-213ENST00000523541 C17orf102A2RUQ5 167 aa19.68■□□□□ 0.74
CCNC-213ENST00000523541 CPLX1O14810 134 aa19.68■□□□□ 0.74
CCNC-213ENST00000523541 CAND2O75155 1236 aa19.68■□□□□ 0.74
CCNC-213ENST00000523541 SSRP1Q08945 709 aaKnown RBP19.68■□□□□ 0.74
CCNC-213ENST00000523541 REXO1Q8N1G1 1221 aaKnown RBP19.68■□□□□ 0.74
CCNC-213ENST00000523541 PHKBQ93100 1093 aa19.68■□□□□ 0.74
CCNC-213ENST00000523541 SLC26A6Q9BXS9 759 aa19.68■□□□□ 0.74
CCNC-213ENST00000523541 BAIAP3O94812 1187 aa19.67■□□□□ 0.74
CCNC-213ENST00000523541 CKBP12277 381 aa19.67■□□□□ 0.74
CCNC-213ENST00000523541 ZNF76P36508 570 aa19.67■□□□□ 0.74
CCNC-213ENST00000523541 CCT2P78371 535 aaKnown RBP19.67■□□□□ 0.74
CCNC-213ENST00000523541 ARHGAP4P98171 946 aa19.67■□□□□ 0.74
CCNC-213ENST00000523541 UTP14CQ5TAP6 766 aaKnown RBP19.67■□□□□ 0.74
CCNC-213ENST00000523541 SERINC5Q86VE9 423 aa19.67■□□□□ 0.74
CCNC-213ENST00000523541 PHOSPHO2Q8TCD6 241 aa19.67■□□□□ 0.74
CCNC-213ENST00000523541 CRYGNQ8WXF5 182 aa19.67■□□□□ 0.74
CCNC-213ENST00000523541 VWCEQ96DN2 955 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 105.3 ms