RNA–Protein interactions for RNA: ENST00000523469.5

CPNE3-206, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-206ENST00000523469 MFSD3Q96ES6 412 aa8.54□□□□□ -1.04
CPNE3-206ENST00000523469 COQ6Q9Y2Z9 468 aa8.54□□□□□ -1.04
CPNE3-206ENST00000523469 SLC27A2O14975 620 aa8.53□□□□□ -1.04
CPNE3-206ENST00000523469 GYS2P54840 703 aa8.53□□□□□ -1.04
CPNE3-206ENST00000523469 NCKAP1LP55160 1127 aa8.53□□□□□ -1.04
CPNE3-206ENST00000523469 LACTBP83111 547 aaPredicted RBP8.53□□□□□ -1.04
CPNE3-206ENST00000523469 ETV3LQ6ZN32 361 aa8.53□□□□□ -1.04
CPNE3-206ENST00000523469 ARHGAP36Q6ZRI8 547 aa8.53□□□□□ -1.04
CPNE3-206ENST00000523469 IGDCC3Q8IVU1 814 aa8.53□□□□□ -1.04
CPNE3-206ENST00000523469 FAM126BQ8IXS8 530 aa8.53□□□□□ -1.04
CPNE3-206ENST00000523469 DHX37Q8IY37 1157 aaKnown RBP8.53□□□□□ -1.04
CPNE3-206ENST00000523469 IGSF22Q8N9C0 903 aa8.53□□□□□ -1.04
CPNE3-206ENST00000523469 SMARCA2P51531 1590 aa8.52□□□□□ -1.04
CPNE3-206ENST00000523469 CADPSQ9ULU8 1353 aa8.52□□□□□ -1.05
CPNE3-206ENST00000523469 TCRBV5S4A2TA0A5A2 114 aa8.52□□□□□ -1.05
CPNE3-206ENST00000523469 ZNF561-AS1K7EIQ3 104 aa8.52□□□□□ -1.05
CPNE3-206ENST00000523469 IRS4O14654 1257 aaPredicted RBP8.52□□□□□ -1.05
CPNE3-206ENST00000523469 TSPAN15O95858 294 aa8.52□□□□□ -1.05
CPNE3-206ENST00000523469 KRT1P04264 644 aa8.52□□□□□ -1.05
CPNE3-206ENST00000523469 ZNF460Q14592 562 aa8.52□□□□□ -1.05
CPNE3-206ENST00000523469 PKN1Q16512 942 aa8.52□□□□□ -1.05
CPNE3-206ENST00000523469 EGFLAMQ63HQ2 1017 aa8.52□□□□□ -1.05
CPNE3-206ENST00000523469 UBE2R2Q712K3 238 aaPredicted RBP8.52□□□□□ -1.05
CPNE3-206ENST00000523469 OSTM1Q86WC4 334 aa8.52□□□□□ -1.05
CPNE3-206ENST00000523469 NLGN4XQ8N0W4 816 aa8.52□□□□□ -1.05
CPNE3-206ENST00000523469 ARRDC4Q8NCT1 418 aa8.52□□□□□ -1.05
CPNE3-206ENST00000523469 YIPF4Q9BSR8 244 aa8.52□□□□□ -1.05
CPNE3-206ENST00000523469 PDGFDQ9GZP0 370 aaPredicted RBP8.52□□□□□ -1.05
CPNE3-206ENST00000523469 SAMD15Q9P1V8 674 aa8.52□□□□□ -1.05
CPNE3-206ENST00000523469 BAZ1AQ9NRL2 1556 aaPredicted RBP8.52□□□□□ -1.05
CPNE3-206ENST00000523469 TCAF2A6NFQ2 919 aa8.51□□□□□ -1.05
CPNE3-206ENST00000523469 BUB1BO60566 1050 aaPredicted RBP8.51□□□□□ -1.05
CPNE3-206ENST00000523469 AMY2AP04746 511 aa8.51□□□□□ -1.05
CPNE3-206ENST00000523469 AMY2BP19961 511 aa8.51□□□□□ -1.05
CPNE3-206ENST00000523469 IGFBP6P24592 240 aaPredicted RBP8.51□□□□□ -1.05
CPNE3-206ENST00000523469 EPHA5P54756 1037 aa8.51□□□□□ -1.05
CPNE3-206ENST00000523469 JAM2P57087 298 aa8.51□□□□□ -1.05
CPNE3-206ENST00000523469 CACNB2Q08289 660 aaPredicted RBP8.51□□□□□ -1.05
CPNE3-206ENST00000523469 TUSC3Q13454 348 aa8.51□□□□□ -1.05
CPNE3-206ENST00000523469 TM4SF20Q53R12 229 aa8.51□□□□□ -1.05
CPNE3-206ENST00000523469 TMEM177Q53S58 311 aa8.51□□□□□ -1.05
CPNE3-206ENST00000523469 ATG14Q6ZNE5 492 aa8.51□□□□□ -1.05
CPNE3-206ENST00000523469 KCTD1Q719H9 257 aa8.51□□□□□ -1.05
CPNE3-206ENST00000523469 OVCH1Q7RTY7 1134 aa8.51□□□□□ -1.05
CPNE3-206ENST00000523469 LRRTM3Q86VH5 581 aa8.51□□□□□ -1.05
CPNE3-206ENST00000523469 CISD2Q8N5K1 135 aaKnown RBP8.51□□□□□ -1.05
CPNE3-206ENST00000523469 TTLL11Q8NHH1 800 aa8.51□□□□□ -1.05
CPNE3-206ENST00000523469 SIGLEC10Q96LC7 697 aa8.51□□□□□ -1.05
CPNE3-206ENST00000523469 NGRNQ9NPE2 291 aaKnown RBP8.51□□□□□ -1.05
CPNE3-206ENST00000523469 SRPK3Q9UPE1 567 aa8.51□□□□□ -1.05
CPNE3-206ENST00000523469 NESP48681 1621 aa8.51□□□□□ -1.05
CPNE3-206ENST00000523469 C1QTNF9P0C862 333 aa8.5□□□□□ -1.05
CPNE3-206ENST00000523469 JMJD7P0C870 316 aa8.5□□□□□ -1.05
CPNE3-206ENST00000523469 ATF2P15336 505 aa8.5□□□□□ -1.05
CPNE3-206ENST00000523469 KRT15P19012 456 aa8.5□□□□□ -1.05
CPNE3-206ENST00000523469 POU3F2P20265 443 aaPredicted RBP8.5□□□□□ -1.05
CPNE3-206ENST00000523469 FIGNQ5HY92 759 aa8.5□□□□□ -1.05
CPNE3-206ENST00000523469 EP400NLQ6ZTU2 488 aa8.5□□□□□ -1.05
CPNE3-206ENST00000523469 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.5□□□□□ -1.05
CPNE3-206ENST00000523469 B3GNT8Q7Z7M8 397 aa8.5□□□□□ -1.05
CPNE3-206ENST00000523469 ZC3H18Q86VM9 953 aaKnown RBP8.5□□□□□ -1.05
CPNE3-206ENST00000523469 PTRH1Q86Y79 214 aaKnown RBP8.5□□□□□ -1.05
CPNE3-206ENST00000523469 SH3RF2Q8TEC5 729 aa8.5□□□□□ -1.05
CPNE3-206ENST00000523469 CLEC4DQ8WXI8 215 aa8.5□□□□□ -1.05
CPNE3-206ENST00000523469 SMURF1Q9HCE7 757 aa8.5□□□□□ -1.05
CPNE3-206ENST00000523469 DTLQ9NZJ0 730 aa8.5□□□□□ -1.05
CPNE3-206ENST00000523469 FAN1Q9Y2M0 1017 aa8.5□□□□□ -1.05
CPNE3-206ENST00000523469 IRAK3Q9Y616 596 aa8.5□□□□□ -1.05
CPNE3-206ENST00000523469 M0R2C6 588 aa8.49□□□□□ -1.05
CPNE3-206ENST00000523469 MAN2B1O00754 1011 aa8.49□□□□□ -1.05
CPNE3-206ENST00000523469 MC3RP41968 323 aa8.49□□□□□ -1.05
CPNE3-206ENST00000523469 CFAP100Q494V2 611 aa8.49□□□□□ -1.05
CPNE3-206ENST00000523469 CNNM4Q6P4Q7 775 aa8.49□□□□□ -1.05
CPNE3-206ENST00000523469 HHIPL2Q6UWX4 724 aa8.49□□□□□ -1.05
CPNE3-206ENST00000523469 RBM12BQ8IXT5 1001 aaKnown RBP8.49□□□□□ -1.05
CPNE3-206ENST00000523469 DDX1Q92499 740 aaKnown RBP8.49□□□□□ -1.05
CPNE3-206ENST00000523469 DDX11Q96FC9 970 aa8.49□□□□□ -1.05
CPNE3-206ENST00000523469 TOE1Q96GM8 510 aaKnown RBP8.49□□□□□ -1.05
CPNE3-206ENST00000523469 CD244Q9BZW8 370 aa8.49□□□□□ -1.05
CPNE3-206ENST00000523469 CD320Q9NPF0 282 aa8.49□□□□□ -1.05
CPNE3-206ENST00000523469 SMG5Q9UPR3 1016 aaKnown RBP8.49□□□□□ -1.05
CPNE3-206ENST00000523469 GLRX3O76003 335 aaKnown RBP8.48□□□□□ -1.05
CPNE3-206ENST00000523469 LTFP02788 710 aa8.48□□□□□ -1.05
CPNE3-206ENST00000523469 RAP1GAPP47736 663 aa8.48□□□□□ -1.05
CPNE3-206ENST00000523469 NKX3-2P78367 333 aa8.48□□□□□ -1.05
CPNE3-206ENST00000523469 PIK3R6Q5UE93 754 aa8.48□□□□□ -1.05
CPNE3-206ENST00000523469 CDCA2Q69YH5 1023 aaPredicted RBP8.48□□□□□ -1.05
CPNE3-206ENST00000523469 ANKLE2Q86XL3 938 aa8.48□□□□□ -1.05
CPNE3-206ENST00000523469 C2orf69Q8N8R5 385 aa8.48□□□□□ -1.05
CPNE3-206ENST00000523469 WNK4Q96J92 1243 aa8.48□□□□□ -1.05
CPNE3-206ENST00000523469 PCDH18Q9HCL0 1135 aa8.48□□□□□ -1.05
CPNE3-206ENST00000523469 TELO2Q9Y4R8 837 aa8.48□□□□□ -1.05
CPNE3-206ENST00000523469 ATP23Q9Y6H3 246 aa8.48□□□□□ -1.05
CPNE3-206ENST00000523469 KIF21AQ7Z4S6 1674 aa8.48□□□□□ -1.05
CPNE3-206ENST00000523469 C8BP07358 591 aa8.47□□□□□ -1.05
CPNE3-206ENST00000523469 CYP2C8P10632 490 aa8.47□□□□□ -1.05
CPNE3-206ENST00000523469 STAT5AP42229 794 aa8.47□□□□□ -1.05
CPNE3-206ENST00000523469 NEK4P51957 841 aa8.47□□□□□ -1.05
CPNE3-206ENST00000523469 FOXO4P98177 505 aa8.47□□□□□ -1.05
CPNE3-206ENST00000523469 ARHGAP44Q17R89 818 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms