RNA–Protein interactions for RNA: ENST00000522788.5

HOXA3-206, Transcript of homeobox A3, humanhuman

TSL 3

Gene HOXA3, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-206ENST00000522788 SMCO2A6NFE2 343 aa24.7■■□□□ 1.54
HOXA3-206ENST00000522788 PFKMP08237 780 aa24.7■■□□□ 1.54
HOXA3-206ENST00000522788 PBX2P40425 430 aa24.7■■□□□ 1.54
HOXA3-206ENST00000522788 CLK2P49760 499 aaKnown RBP24.7■■□□□ 1.54
HOXA3-206ENST00000522788 RBL2Q08999 1139 aa24.7■■□□□ 1.54
HOXA3-206ENST00000522788 GPNMBQ14956 572 aa24.7■■□□□ 1.54
HOXA3-206ENST00000522788 NTRK3Q16288 839 aa24.7■■□□□ 1.54
HOXA3-206ENST00000522788 PKN1Q16512 942 aa24.7■■□□□ 1.54
HOXA3-206ENST00000522788 CAGE1Q8TC20 777 aa24.7■■□□□ 1.54
HOXA3-206ENST00000522788 PGBD1Q96JS3 809 aa24.7■■□□□ 1.54
HOXA3-206ENST00000522788 JADE2Q9NQC1 790 aa24.7■■□□□ 1.54
HOXA3-206ENST00000522788 COL6A3P12111 3177 aa24.7■■□□□ 1.54
HOXA3-206ENST00000522788 H3BRB1 525 aa24.69■■□□□ 1.54
HOXA3-206ENST00000522788 NOP56O00567 594 aaKnown RBP24.69■■□□□ 1.54
HOXA3-206ENST00000522788 DNAJB2P25686 324 aa24.69■■□□□ 1.54
HOXA3-206ENST00000522788 PDIA3P30101 505 aaKnown RBP24.69■■□□□ 1.54
HOXA3-206ENST00000522788 RFC2P35250 354 aa24.69■■□□□ 1.54
HOXA3-206ENST00000522788 ADCY7P51828 1080 aa24.69■■□□□ 1.54
HOXA3-206ENST00000522788 TOB2Q14106 344 aaPredicted RBP24.69■■□□□ 1.54
HOXA3-206ENST00000522788 TRIM71Q2Q1W2 868 aaKnown RBP24.69■■□□□ 1.54
HOXA3-206ENST00000522788 DEFB128Q7Z7B8 93 aa24.69■■□□□ 1.54
HOXA3-206ENST00000522788 AFAP1L1Q8TED9 768 aa24.69■■□□□ 1.54
HOXA3-206ENST00000522788 WNT8BQ93098 351 aa24.69■■□□□ 1.54
HOXA3-206ENST00000522788 PBX4Q9BYU1 374 aa24.69■■□□□ 1.54
HOXA3-206ENST00000522788 TUT1Q9H6E5 874 aaKnown RBP24.69■■□□□ 1.54
HOXA3-206ENST00000522788 TMEM265A0A087WTH1 108 aa24.68■■□□□ 1.54
HOXA3-206ENST00000522788 PRPF3O43395 683 aaKnown RBP24.68■■□□□ 1.54
HOXA3-206ENST00000522788 SCG2P13521 617 aa24.68■■□□□ 1.54
HOXA3-206ENST00000522788 HOXC8P31273 242 aa24.68■■□□□ 1.54
HOXA3-206ENST00000522788 CDHR1Q96JP9 859 aa24.68■■□□□ 1.54
HOXA3-206ENST00000522788 CDX2Q99626 313 aaPredicted RBP24.68■■□□□ 1.54
HOXA3-206ENST00000522788 ANO3Q9BYT9 981 aa24.68■■□□□ 1.54
HOXA3-206ENST00000522788 TM6SF1Q9BZW5 370 aa24.68■■□□□ 1.54
HOXA3-206ENST00000522788 MTIF3Q9H2K0 278 aaKnown RBP24.68■■□□□ 1.54
HOXA3-206ENST00000522788 TMEM260Q9NX78 707 aa24.68■■□□□ 1.54
HOXA3-206ENST00000522788 CDH23Q9H251 3354 aa24.67■■□□□ 1.54
HOXA3-206ENST00000522788 ADAMTS3O15072 1205 aa24.67■■□□□ 1.54
HOXA3-206ENST00000522788 FOSP01100 380 aaPredicted RBP24.67■■□□□ 1.54
HOXA3-206ENST00000522788 PTK7Q13308 1070 aa24.67■■□□□ 1.54
HOXA3-206ENST00000522788 MTMR1Q13613 665 aa24.67■■□□□ 1.54
HOXA3-206ENST00000522788 TRAF7Q6Q0C0 670 aa24.67■■□□□ 1.54
HOXA3-206ENST00000522788 TRIM50Q86XT4 487 aa24.67■■□□□ 1.54
HOXA3-206ENST00000522788 GIMAP8Q8ND71 665 aaPredicted RBP24.67■■□□□ 1.54
HOXA3-206ENST00000522788 CYP2W1Q8TAV3 490 aa24.67■■□□□ 1.54
HOXA3-206ENST00000522788 PHKBQ93100 1093 aa24.67■■□□□ 1.54
HOXA3-206ENST00000522788 MXRA8Q9BRK3 442 aa24.67■■□□□ 1.54
HOXA3-206ENST00000522788 EHMT1Q9H9B1 1298 aa24.67■■□□□ 1.54
HOXA3-206ENST00000522788 MAFGO15525 162 aa24.66■■□□□ 1.54
HOXA3-206ENST00000522788 CKBP12277 381 aa24.66■■□□□ 1.54
HOXA3-206ENST00000522788 SELPP16109 830 aa24.66■■□□□ 1.54
HOXA3-206ENST00000522788 SP4Q02446 784 aa24.66■■□□□ 1.54
HOXA3-206ENST00000522788 CCDC155Q8N6L0 562 aa24.66■■□□□ 1.54
HOXA3-206ENST00000522788 TIFAQ96CG3 184 aa24.66■■□□□ 1.54
HOXA3-206ENST00000522788 CYP46A1Q9Y6A2 500 aa24.66■■□□□ 1.54
HOXA3-206ENST00000522788 MYH7BA7E2Y1 1941 aa24.66■■□□□ 1.54
HOXA3-206ENST00000522788 ESYT2A0FGR8 921 aa24.65■■□□□ 1.54
HOXA3-206ENST00000522788 SMIM10L2AP0DMW4 78 aa24.65■■□□□ 1.54
HOXA3-206ENST00000522788 SMIM10L2BP0DMW5 78 aa24.65■■□□□ 1.54
HOXA3-206ENST00000522788 CCT2P78371 535 aaKnown RBP24.65■■□□□ 1.54
HOXA3-206ENST00000522788 AP3B2Q13367 1082 aa24.65■■□□□ 1.54
HOXA3-206ENST00000522788 UTP14CQ5TAP6 766 aaKnown RBP24.65■■□□□ 1.54
HOXA3-206ENST00000522788 LRRC8DQ7L1W4 858 aa24.65■■□□□ 1.54
HOXA3-206ENST00000522788 UPF3BQ9BZI7 483 aaKnown RBP24.65■■□□□ 1.54
HOXA3-206ENST00000522788 GLT8D2Q9H1C3 349 aa24.65■■□□□ 1.54
HOXA3-206ENST00000522788 RNPEPQ9H4A4 650 aa24.65■■□□□ 1.54
HOXA3-206ENST00000522788 NCOA5Q9HCD5 579 aaKnown RBP24.65■■□□□ 1.54
HOXA3-206ENST00000522788 PKD2L1Q9P0L9 805 aa24.65■■□□□ 1.54
HOXA3-206ENST00000522788 GSTTP1A0A1W2PQM5 241 aa24.64■■□□□ 1.54
HOXA3-206ENST00000522788 RBAK-RBAKDNI3L0D1 243 aa24.64■■□□□ 1.54
HOXA3-206ENST00000522788 PPFIA3O75145 1194 aa24.64■■□□□ 1.54
HOXA3-206ENST00000522788 CENPBP07199 599 aaPredicted RBP24.64■■□□□ 1.54
HOXA3-206ENST00000522788 IFNAR1P17181 557 aa24.64■■□□□ 1.54
HOXA3-206ENST00000522788 SREBF1P36956 1147 aa24.64■■□□□ 1.54
HOXA3-206ENST00000522788 SERINC5Q86VE9 423 aa24.64■■□□□ 1.54
HOXA3-206ENST00000522788 RNF26Q9BY78 433 aaPredicted RBP24.64■■□□□ 1.54
HOXA3-206ENST00000522788 ZMYND12Q9H0C1 365 aa24.64■■□□□ 1.54
HOXA3-206ENST00000522788 KCNH7Q9NS40 1196 aa24.64■■□□□ 1.54
HOXA3-206ENST00000522788 SLC4A7Q9Y6M7 1214 aa24.64■■□□□ 1.54
HOXA3-206ENST00000522788 C17orf102A2RUQ5 167 aa24.63■■□□□ 1.53
HOXA3-206ENST00000522788 NBNO60934 754 aa24.63■■□□□ 1.53
HOXA3-206ENST00000522788 ARP10275 920 aa24.63■■□□□ 1.53
HOXA3-206ENST00000522788 TCF7P36402 384 aaPredicted RBP24.63■■□□□ 1.53
HOXA3-206ENST00000522788 GRIN2CQ14957 1233 aa24.63■■□□□ 1.53
HOXA3-206ENST00000522788 JAKMIP3Q5VZ66 844 aa24.63■■□□□ 1.53
HOXA3-206ENST00000522788 CRYGNQ8WXF5 182 aa24.63■■□□□ 1.53
HOXA3-206ENST00000522788 LARP6Q9BRS8 491 aaKnown RBP24.63■■□□□ 1.53
HOXA3-206ENST00000522788 ZNF576Q9H609 170 aa24.63■■□□□ 1.53
HOXA3-206ENST00000522788 YBX2Q9Y2T7 364 aaKnown RBP24.63■■□□□ 1.53
HOXA3-206ENST00000522788 ZBBXA8MT70 800 aa24.62■■□□□ 1.53
HOXA3-206ENST00000522788 TREHO43280 583 aa24.62■■□□□ 1.53
HOXA3-206ENST00000522788 CXCL10P02778 98 aa24.62■■□□□ 1.53
HOXA3-206ENST00000522788 CEP55Q53EZ4 464 aa24.62■■□□□ 1.53
HOXA3-206ENST00000522788 ZNF618Q5T7W0 954 aa24.62■■□□□ 1.53
HOXA3-206ENST00000522788 MYLIPQ8WY64 445 aa24.62■■□□□ 1.53
HOXA3-206ENST00000522788 SEPT1Q8WYJ6 367 aa24.62■■□□□ 1.53
HOXA3-206ENST00000522788 SLC26A6Q9BXS9 759 aa24.62■■□□□ 1.53
HOXA3-206ENST00000522788 FTOQ9C0B1 505 aaKnown RBP eCLIP24.62■■□□□ 1.53
HOXA3-206ENST00000522788 MEIS1O00470 390 aa24.61■■□□□ 1.53
HOXA3-206ENST00000522788 ACTN1P12814 892 aa24.61■■□□□ 1.53
HOXA3-206ENST00000522788 RABGGTBP53611 331 aa24.61■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms