RNA–Protein interactions for RNA: ENST00000522556.1

CLK4-211, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,249 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-211ENST00000522556 SOX1O00570 391 aaPredicted RBP20.4■□□□□ 0.86
CLK4-211ENST00000522556 KPNA6O60684 536 aa20.4■□□□□ 0.86
CLK4-211ENST00000522556 F2P00734 622 aa20.4■□□□□ 0.86
CLK4-211ENST00000522556 FOSP01100 380 aaPredicted RBP20.4■□□□□ 0.86
CLK4-211ENST00000522556 FAM86B2P0C5J1 330 aa20.4■□□□□ 0.86
CLK4-211ENST00000522556 RAG1P15918 1043 aa20.4■□□□□ 0.86
CLK4-211ENST00000522556 CYP2C18P33260 490 aa20.4■□□□□ 0.86
CLK4-211ENST00000522556 BMP8BP34820 402 aa20.4■□□□□ 0.86
CLK4-211ENST00000522556 PSEN2P49810 448 aa20.4■□□□□ 0.86
CLK4-211ENST00000522556 NLRP5P59047 1200 aa20.4■□□□□ 0.86
CLK4-211ENST00000522556 SCN5AQ14524 2016 aa20.4■□□□□ 0.86
CLK4-211ENST00000522556 CCDC148Q8NFR7 591 aa20.4■□□□□ 0.86
CLK4-211ENST00000522556 CCDC12Q8WUD4 166 aaPredicted RBP20.4■□□□□ 0.86
CLK4-211ENST00000522556 GPR20Q99678 358 aa20.4■□□□□ 0.86
CLK4-211ENST00000522556 ALG1Q9BT22 464 aa20.4■□□□□ 0.86
CLK4-211ENST00000522556 EHMT1Q9H9B1 1298 aa20.4■□□□□ 0.86
CLK4-211ENST00000522556 STK36Q9NRP7 1315 aa20.4■□□□□ 0.86
CLK4-211ENST00000522556 TANC1Q9C0D5 1861 aa20.39■□□□□ 0.86
CLK4-211ENST00000522556 HAS3O00219 553 aa20.39■□□□□ 0.85
CLK4-211ENST00000522556 LGALS2P05162 132 aa20.39■□□□□ 0.85
CLK4-211ENST00000522556 FXR1P51114 621 aaKnown RBP eCLIP20.39■□□□□ 0.85
CLK4-211ENST00000522556 FOSBP53539 338 aa20.39■□□□□ 0.85
CLK4-211ENST00000522556 ITGB3BPQ13352 177 aaPredicted RBP20.39■□□□□ 0.85
CLK4-211ENST00000522556 NEDD9Q14511 834 aa20.39■□□□□ 0.85
CLK4-211ENST00000522556 MFSD10Q14728 455 aa20.39■□□□□ 0.85
CLK4-211ENST00000522556 C9orf50Q5SZB4 431 aa20.39■□□□□ 0.85
CLK4-211ENST00000522556 GDF6Q6KF10 455 aaPredicted RBP20.39■□□□□ 0.85
CLK4-211ENST00000522556 CPLX2Q6PUV4 134 aaKnown RBP20.39■□□□□ 0.85
CLK4-211ENST00000522556 NSUN7Q8NE18 718 aaKnown RBP20.39■□□□□ 0.85
CLK4-211ENST00000522556 GLT8D2Q9H1C3 349 aa20.39■□□□□ 0.85
CLK4-211ENST00000522556 SH3GLB2Q9NR46 395 aa20.39■□□□□ 0.85
CLK4-211ENST00000522556 KCNH7Q9NS40 1196 aa20.39■□□□□ 0.85
CLK4-211ENST00000522556 IGLV3-22A0A075B6J6 115 aa20.38■□□□□ 0.85
CLK4-211ENST00000522556 M0R2N6 131 aa20.38■□□□□ 0.85
CLK4-211ENST00000522556 TLR3O15455 904 aaKnown RBP20.38■□□□□ 0.85
CLK4-211ENST00000522556 TIMP1P01033 207 aa20.38■□□□□ 0.85
CLK4-211ENST00000522556 GNA11P29992 359 aa20.38■□□□□ 0.85
CLK4-211ENST00000522556 ZNF200P98182 395 aaPredicted RBP20.38■□□□□ 0.85
CLK4-211ENST00000522556 KIAA0753Q2KHM9 967 aa20.38■□□□□ 0.85
CLK4-211ENST00000522556 CEP55Q53EZ4 464 aa20.38■□□□□ 0.85
CLK4-211ENST00000522556 NFRKBQ6P4R8 1299 aa20.38■□□□□ 0.85
CLK4-211ENST00000522556 SENP7Q9BQF6 1050 aa20.38■□□□□ 0.85
CLK4-211ENST00000522556 NOC4LQ9BVI4 516 aaKnown RBP20.38■□□□□ 0.85
CLK4-211ENST00000522556 WNT8AQ9H1J5 351 aa20.38■□□□□ 0.85
CLK4-211ENST00000522556 ORC3Q9UBD5 711 aaPredicted RBP20.38■□□□□ 0.85
CLK4-211ENST00000522556 HDAC6Q9UBN7 1215 aa20.38■□□□□ 0.85
CLK4-211ENST00000522556 NOP56O00567 594 aaKnown RBP20.37■□□□□ 0.85
CLK4-211ENST00000522556 UTP14CQ5TAP6 766 aaKnown RBP20.37■□□□□ 0.85
CLK4-211ENST00000522556 TDHQ8IZJ6 230 aa20.37■□□□□ 0.85
CLK4-211ENST00000522556 HIPK3Q9H422 1215 aa20.37■□□□□ 0.85
CLK4-211ENST00000522556 AGO4Q9HCK5 861 aaKnown RBP20.37■□□□□ 0.85
CLK4-211ENST00000522556 PCDHA4Q9UN74 947 aa20.37■□□□□ 0.85
CLK4-211ENST00000522556 GSTTP1A0A1W2PQM5 241 aa20.36■□□□□ 0.85
CLK4-211ENST00000522556 MEIS1O00470 390 aa20.36■□□□□ 0.85
CLK4-211ENST00000522556 PPFIA4O75335 1185 aa20.36■□□□□ 0.85
CLK4-211ENST00000522556 CDKL5O76039 1030 aa20.36■□□□□ 0.85
CLK4-211ENST00000522556 CD2BP2O95400 341 aaKnown RBP20.36■□□□□ 0.85
CLK4-211ENST00000522556 CSF2RAP15509 400 aa20.36■□□□□ 0.85
CLK4-211ENST00000522556 CCL23P55773 120 aa20.36■□□□□ 0.85
CLK4-211ENST00000522556 SHHQ15465 462 aa20.36■□□□□ 0.85
CLK4-211ENST00000522556 TEX2Q8IWB9 1127 aa20.36■□□□□ 0.85
CLK4-211ENST00000522556 CCDC83Q8IWF9 413 aa20.36■□□□□ 0.85
CLK4-211ENST00000522556 OXER1Q8TDS5 423 aa20.36■□□□□ 0.85
CLK4-211ENST00000522556 DHX38Q92620 1227 aaKnown RBP20.36■□□□□ 0.85
CLK4-211ENST00000522556 WNT8BQ93098 351 aa20.36■□□□□ 0.85
CLK4-211ENST00000522556 PHF20Q9BVI0 1012 aa20.36■□□□□ 0.85
CLK4-211ENST00000522556 DDX39AO00148 427 aaKnown RBP20.35■□□□□ 0.85
CLK4-211ENST00000522556 CYP3A4P08684 503 aa20.35■□□□□ 0.85
CLK4-211ENST00000522556 ZNF76P36508 570 aa20.35■□□□□ 0.85
CLK4-211ENST00000522556 MFSD5Q6N075 450 aa20.35■□□□□ 0.85
CLK4-211ENST00000522556 PLA2G4DQ86XP0 818 aa20.35■□□□□ 0.85
CLK4-211ENST00000522556 BLIDQ8IZY5 108 aa20.35■□□□□ 0.85
CLK4-211ENST00000522556 DAGLBQ8NCG7 672 aa20.35■□□□□ 0.85
CLK4-211ENST00000522556 LENG9Q96B70 501 aa20.35■□□□□ 0.85
CLK4-211ENST00000522556 VWCEQ96DN2 955 aa20.35■□□□□ 0.85
CLK4-211ENST00000522556 SCLYQ96I15 445 aa20.35■□□□□ 0.85
CLK4-211ENST00000522556 LRCH3Q96II8 777 aa20.35■□□□□ 0.85
CLK4-211ENST00000522556 CDHR1Q96JP9 859 aa20.35■□□□□ 0.85
CLK4-211ENST00000522556 PCYT2Q99447 389 aa20.35■□□□□ 0.85
CLK4-211ENST00000522556 GTF2IRD1Q9UHL9 959 aa20.35■□□□□ 0.85
CLK4-211ENST00000522556 LAMA3Q16787 3333 aa20.35■□□□□ 0.85
CLK4-211ENST00000522556 FAM205CA6NFA0 338 aa20.34■□□□□ 0.85
CLK4-211ENST00000522556 CCNE2O96020 404 aa20.34■□□□□ 0.85
CLK4-211ENST00000522556 ACRP10323 421 aa20.34■□□□□ 0.85
CLK4-211ENST00000522556 TCF7P36402 384 aaPredicted RBP20.34■□□□□ 0.85
CLK4-211ENST00000522556 FPGSQ05932 587 aa20.34■□□□□ 0.85
CLK4-211ENST00000522556 PTGISQ16647 500 aa20.34■□□□□ 0.85
CLK4-211ENST00000522556 EARS2Q5JPH6 523 aaKnown RBP20.34■□□□□ 0.85
CLK4-211ENST00000522556 C16orf59Q7L2K0 433 aa20.34■□□□□ 0.85
CLK4-211ENST00000522556 SESTD1Q86VW0 696 aa20.34■□□□□ 0.85
CLK4-211ENST00000522556 BICD2Q8TD16 824 aa20.34■□□□□ 0.85
CLK4-211ENST00000522556 TBCKQ8TEA7 893 aa20.34■□□□□ 0.85
CLK4-211ENST00000522556 GJA10Q969M2 543 aa20.34■□□□□ 0.85
CLK4-211ENST00000522556 LIMCH1Q9UPQ0 1083 aa20.34■□□□□ 0.85
CLK4-211ENST00000522556 H3BRB1 525 aa20.33■□□□□ 0.85
CLK4-211ENST00000522556 PTPN11Q06124 597 aaPredicted RBP20.33■□□□□ 0.85
CLK4-211ENST00000522556 C7orf31Q8N865 590 aa20.33■□□□□ 0.85
CLK4-211ENST00000522556 TBC1D32Q96NH3 1257 aa20.33■□□□□ 0.85
CLK4-211ENST00000522556 KATNAL1Q9BW62 490 aa20.33■□□□□ 0.85
CLK4-211ENST00000522556 TUT1Q9H6E5 874 aaKnown RBP20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms