RNA–Protein interactions for RNA: ENST00000521621.5

CLK4-209, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 2,780 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-209ENST00000521621 LARGE1O95461 756 aa10.78□□□□□ -0.68
CLK4-209ENST00000521621 TLE2Q04725 743 aa10.78□□□□□ -0.68
CLK4-209ENST00000521621 PLPPR4Q7Z2D5 763 aa10.78□□□□□ -0.68
CLK4-209ENST00000521621 RPAINQ86UA6 219 aa10.78□□□□□ -0.68
CLK4-209ENST00000521621 C7orf61Q8IZ16 206 aa10.78□□□□□ -0.68
CLK4-209ENST00000521621 COPS5Q92905 334 aa10.78□□□□□ -0.68
CLK4-209ENST00000521621 SPATA33Q96N06 139 aa10.78□□□□□ -0.68
CLK4-209ENST00000521621 RIT2Q99578 217 aa10.78□□□□□ -0.68
CLK4-209ENST00000521621 KCNH7Q9NS40 1196 aa10.78□□□□□ -0.68
CLK4-209ENST00000521621 VPS54Q9P1Q0 977 aa10.78□□□□□ -0.68
CLK4-209ENST00000521621 ORC3Q9UBD5 711 aaPredicted RBP10.78□□□□□ -0.68
CLK4-209ENST00000521621 GTF3C3Q9Y5Q9 886 aa10.78□□□□□ -0.68
CLK4-209ENST00000521621 KIAA0100Q14667 2235 aaKnown RBP10.78□□□□□ -0.68
CLK4-209ENST00000521621 TNRC18O15417 2968 aaPredicted RBP10.78□□□□□ -0.68
CLK4-209ENST00000521621 PITPNM1O00562 1244 aa10.77□□□□□ -0.68
CLK4-209ENST00000521621 TIMP1P01033 207 aa10.77□□□□□ -0.68
CLK4-209ENST00000521621 CXCL17Q6UXB2 119 aa10.77□□□□□ -0.68
CLK4-209ENST00000521621 LENG9Q96B70 501 aa10.77□□□□□ -0.68
CLK4-209ENST00000521621 MLXIPQ9HAP2 919 aa10.77□□□□□ -0.68
CLK4-209ENST00000521621 TMEM260Q9NX78 707 aa10.77□□□□□ -0.68
CLK4-209ENST00000521621 DHX15O43143 795 aaKnown RBP10.77□□□□□ -0.69
CLK4-209ENST00000521621 MMP1P03956 469 aa10.77□□□□□ -0.69
CLK4-209ENST00000521621 MYL3P08590 195 aa10.77□□□□□ -0.69
CLK4-209ENST00000521621 PSEN2P49810 448 aa10.77□□□□□ -0.69
CLK4-209ENST00000521621 ZNF746Q6NUN9 644 aaPredicted RBP10.77□□□□□ -0.69
CLK4-209ENST00000521621 GPR153Q6NV75 609 aa10.77□□□□□ -0.69
CLK4-209ENST00000521621 B3GNT9Q6UX72 402 aa10.77□□□□□ -0.69
CLK4-209ENST00000521621 SMAP1Q8IYB5 467 aaPredicted RBP10.77□□□□□ -0.69
CLK4-209ENST00000521621 SEPT1Q8WYJ6 367 aa10.77□□□□□ -0.69
CLK4-209ENST00000521621 SLC5A5Q92911 643 aa10.77□□□□□ -0.69
CLK4-209ENST00000521621 TNPO1Q92973 898 aaKnown RBP10.77□□□□□ -0.69
CLK4-209ENST00000521621 PFKMP08237 780 aa10.77□□□□□ -0.69
CLK4-209ENST00000521621 STK3Q13188 491 aa10.77□□□□□ -0.69
CLK4-209ENST00000521621 NONOQ15233 471 aaKnown RBP eCLIP10.77□□□□□ -0.69
CLK4-209ENST00000521621 CCDC155Q8N6L0 562 aa10.77□□□□□ -0.69
CLK4-209ENST00000521621 CAGE1Q8TC20 777 aa10.77□□□□□ -0.69
CLK4-209ENST00000521621 SDF4Q9BRK5 362 aa10.77□□□□□ -0.69
CLK4-209ENST00000521621 ALG1Q9BT22 464 aa10.77□□□□□ -0.69
CLK4-209ENST00000521621 BRMS1Q9HCU9 246 aa10.77□□□□□ -0.69
CLK4-209ENST00000521621 GTF2IRD1Q9UHL9 959 aa10.77□□□□□ -0.69
CLK4-209ENST00000521621 COL1A2P08123 1366 aa10.76□□□□□ -0.69
CLK4-209ENST00000521621 TRIM43BA6NCK2 446 aa10.76□□□□□ -0.69
CLK4-209ENST00000521621 FAM86B1E9PN63 330 aa10.76□□□□□ -0.69
CLK4-209ENST00000521621 FAM86B2P0C5J1 330 aa10.76□□□□□ -0.69
CLK4-209ENST00000521621 PTK7Q13308 1070 aa10.76□□□□□ -0.69
CLK4-209ENST00000521621 MFSD10Q14728 455 aa10.76□□□□□ -0.69
CLK4-209ENST00000521621 NBPF20Q3BBV1 942 aa10.76□□□□□ -0.69
CLK4-209ENST00000521621 HSDL1Q3SXM5 330 aa10.76□□□□□ -0.69
CLK4-209ENST00000521621 MFSD5Q6N075 450 aa10.76□□□□□ -0.69
CLK4-209ENST00000521621 FERMT2Q96AC1 680 aa10.76□□□□□ -0.69
CLK4-209ENST00000521621 TRIM43Q96BQ3 446 aaPredicted RBP10.76□□□□□ -0.69
CLK4-209ENST00000521621 JPH1Q9HDC5 661 aaPredicted RBP10.76□□□□□ -0.69
CLK4-209ENST00000521621 PRKAG2Q9UGJ0 569 aa10.76□□□□□ -0.69
CLK4-209ENST00000521621 ZNF215Q9UL58 517 aaPredicted RBP10.76□□□□□ -0.69
CLK4-209ENST00000521621 ATP11BQ9Y2G3 1177 aa10.76□□□□□ -0.69
CLK4-209ENST00000521621 KIF3AQ9Y496 699 aa10.76□□□□□ -0.69
CLK4-209ENST00000521621 GSTTP1A0A1W2PQM5 241 aa10.76□□□□□ -0.69
CLK4-209ENST00000521621 LGALS2P05162 132 aa10.76□□□□□ -0.69
CLK4-209ENST00000521621 KRT2P35908 639 aa10.76□□□□□ -0.69
CLK4-209ENST00000521621 ADAM17P78536 824 aa10.76□□□□□ -0.69
CLK4-209ENST00000521621 KRT76Q01546 638 aa10.76□□□□□ -0.69
CLK4-209ENST00000521621 CUL4AQ13619 759 aa10.76□□□□□ -0.69
CLK4-209ENST00000521621 JAKMIP3Q5VZ66 844 aa10.76□□□□□ -0.69
CLK4-209ENST00000521621 FOXP1Q9H334 677 aaPredicted RBP10.76□□□□□ -0.69
CLK4-209ENST00000521621 SLC9A2Q9UBY0 812 aa10.76□□□□□ -0.69
CLK4-209ENST00000521621 DOCK5Q9H7D0 1870 aa10.75□□□□□ -0.69
CLK4-209ENST00000521621 ATP9AO75110 1047 aa10.75□□□□□ -0.69
CLK4-209ENST00000521621 IRX5P78411 483 aaPredicted RBP10.75□□□□□ -0.69
CLK4-209ENST00000521621 ITGB3BPQ13352 177 aaPredicted RBP10.75□□□□□ -0.69
CLK4-209ENST00000521621 PLA2G4DQ86XP0 818 aa10.75□□□□□ -0.69
CLK4-209ENST00000521621 SMARCAD1Q9H4L7 1026 aa10.75□□□□□ -0.69
CLK4-209ENST00000521621 RTEL1Q9NZ71 1219 aa10.75□□□□□ -0.69
CLK4-209ENST00000521621 ADAMTS3O15072 1205 aa10.75□□□□□ -0.69
CLK4-209ENST00000521621 GNAT1P11488 350 aa10.75□□□□□ -0.69
CLK4-209ENST00000521621 SFNP31947 248 aa10.75□□□□□ -0.69
CLK4-209ENST00000521621 ABHD15Q6UXT9 468 aa10.75□□□□□ -0.69
CLK4-209ENST00000521621 CYFIP1Q7L576 1253 aa10.75□□□□□ -0.69
CLK4-209ENST00000521621 ZNF710Q8N1W2 664 aa10.75□□□□□ -0.69
CLK4-209ENST00000521621 NECAB1Q8N987 351 aa10.75□□□□□ -0.69
CLK4-209ENST00000521621 SNX21Q969T3 373 aa10.75□□□□□ -0.69
CLK4-209ENST00000521621 FAM20AQ96MK3 541 aa10.75□□□□□ -0.69
CLK4-209ENST00000521621 NOC4LQ9BVI4 516 aaKnown RBP10.75□□□□□ -0.69
CLK4-209ENST00000521621 KCNMB3Q9NPA1 279 aa10.75□□□□□ -0.69
CLK4-209ENST00000521621 PPME1Q9Y570 386 aa10.75□□□□□ -0.69
CLK4-209ENST00000521621 B4GALT4O60513 344 aa10.74□□□□□ -0.69
CLK4-209ENST00000521621 ARP10275 920 aa10.74□□□□□ -0.69
CLK4-209ENST00000521621 TRAPPC10P48553 1259 aa10.74□□□□□ -0.69
CLK4-209ENST00000521621 ATN1P54259 1190 aaPredicted RBP10.74□□□□□ -0.69
CLK4-209ENST00000521621 PPIGQ13427 754 aaKnown RBP eCLIP10.74□□□□□ -0.693e-11■■□□□ 12.2
CLK4-209ENST00000521621 LRIT3Q3SXY7 679 aa10.74□□□□□ -0.69
CLK4-209ENST00000521621 FAM26DQ5JW98 314 aa10.74□□□□□ -0.69
CLK4-209ENST00000521621 RASIP1Q5U651 963 aa10.74□□□□□ -0.69
CLK4-209ENST00000521621 TBCKQ8TEA7 893 aa10.74□□□□□ -0.69
CLK4-209ENST00000521621 CTAGE1Q96RT6 745 aa10.74□□□□□ -0.69
CLK4-209ENST00000521621 TMEM39AQ9NV64 488 aa10.74□□□□□ -0.69
CLK4-209ENST00000521621 COL4A6Q14031 1691 aa10.74□□□□□ -0.69
CLK4-209ENST00000521621 NRCAMQ92823 1304 aa10.74□□□□□ -0.69
CLK4-209ENST00000521621 RRN3P2A6NIE6 340 aa10.74□□□□□ -0.69
CLK4-209ENST00000521621 H3BRB1 525 aa10.74□□□□□ -0.69
CLK4-209ENST00000521621 IPO5O00410 1097 aaKnown RBP10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms