RNA–Protein interactions for RNA: ENST00000520846.1

MSR1-211, Transcript of macrophage scavenger receptor 1, human

TSL 4

Gene MSR1, Length 373 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSR1-211	ENST00000520846	PIF1	Q9H611	641 aa		7.37	□□□□□ -1.23
MSR1-211	ENST00000520846	SFMBT1	Q9UHJ3	866 aa		7.37	□□□□□ -1.23
MSR1-211	ENST00000520846	LOC101059915	A0A1B0GWI6	518 aa	Predicted RBP	7.36	□□□□□ -1.23
MSR1-211	ENST00000520846	TRIM13	O60858	407 aa		7.36	□□□□□ -1.23
MSR1-211	ENST00000520846	SRGAP2C	P0DJJ0	459 aa		7.36	□□□□□ -1.23
MSR1-211	ENST00000520846	BMP7	P18075	431 aa		7.36	□□□□□ -1.23
MSR1-211	ENST00000520846	TUSC3	Q13454	348 aa		7.36	□□□□□ -1.23
MSR1-211	ENST00000520846	SQSTM1	Q13501	440 aa		7.36	□□□□□ -1.23
MSR1-211	ENST00000520846	FBLN7	Q53RD9	439 aa		7.36	□□□□□ -1.23
MSR1-211	ENST00000520846	TEPP	Q6URK8	271 aa		7.36	□□□□□ -1.23
MSR1-211	ENST00000520846	ZC3H7A	Q8IWR0	971 aa	Known RBP	7.36	□□□□□ -1.23
MSR1-211	ENST00000520846	RBM12B	Q8IXT5	1001 aa	Known RBP	7.36	□□□□□ -1.23
MSR1-211	ENST00000520846	TP53I13	Q8NBR0	393 aa	Predicted RBP	7.36	□□□□□ -1.23
MSR1-211	ENST00000520846	SLC7A14	Q8TBB6	771 aa		7.36	□□□□□ -1.23
MSR1-211	ENST00000520846	SH3TC2	Q8TF17	1288 aa		7.36	□□□□□ -1.23
MSR1-211	ENST00000520846	ZNF526	Q8TF50	670 aa	Predicted RBP	7.36	□□□□□ -1.23
MSR1-211	ENST00000520846	CLEC4D	Q8WXI8	215 aa		7.36	□□□□□ -1.23
MSR1-211	ENST00000520846	MAGEB10	Q96LZ2	347 aa	Predicted RBP	7.36	□□□□□ -1.23
MSR1-211	ENST00000520846	NCOA5	Q9HCD5	579 aa	Known RBP	7.36	□□□□□ -1.23
MSR1-211	ENST00000520846	CATSPERZ	Q9NTU4	200 aa		7.36	□□□□□ -1.23
MSR1-211	ENST00000520846	GSTA4	O15217	222 aa		7.35	□□□□□ -1.23
MSR1-211	ENST00000520846	LRG1	P02750	347 aa		7.35	□□□□□ -1.23
MSR1-211	ENST00000520846	ITGA1	P56199	1179 aa		7.35	□□□□□ -1.23
MSR1-211	ENST00000520846	ST5	P78524	1137 aa		7.35	□□□□□ -1.23
MSR1-211	ENST00000520846	GRIN1	Q05586	938 aa		7.35	□□□□□ -1.23
MSR1-211	ENST00000520846	DLX2	Q07687	328 aa	Predicted RBP	7.35	□□□□□ -1.23
MSR1-211	ENST00000520846	SMAD4	Q13485	552 aa	Known RBP	7.35	□□□□□ -1.23
MSR1-211	ENST00000520846	STK32C	Q86UX6	486 aa		7.35	□□□□□ -1.23
MSR1-211	ENST00000520846	ADGRG2	Q8IZP9	1017 aa		7.35	□□□□□ -1.23
MSR1-211	ENST00000520846	TTLL6	Q8N841	843 aa		7.35	□□□□□ -1.23
MSR1-211	ENST00000520846	MARCH10	Q8NA82	808 aa	Predicted RBP	7.35	□□□□□ -1.23
MSR1-211	ENST00000520846	KY	Q8NBH2	561 aa		7.35	□□□□□ -1.23
MSR1-211	ENST00000520846	TTLL11	Q8NHH1	800 aa		7.35	□□□□□ -1.23
MSR1-211	ENST00000520846	SH3D21	A4FU49	640 aa		7.34	□□□□□ -1.23
MSR1-211	ENST00000520846	KCNQ2	O43526	872 aa		7.34	□□□□□ -1.23
MSR1-211	ENST00000520846	SMARCA5	O60264	1052 aa	Predicted RBP	7.34	□□□□□ -1.23
MSR1-211	ENST00000520846	LTF	P02788	710 aa		7.34	□□□□□ -1.23
MSR1-211	ENST00000520846	PYGM	P11217	842 aa		7.34	□□□□□ -1.23
MSR1-211	ENST00000520846	GPR19	Q15760	415 aa		7.34	□□□□□ -1.23
MSR1-211	ENST00000520846	FAM47C	Q5HY64	1035 aa		7.34	□□□□□ -1.23
MSR1-211	ENST00000520846	C16orf59	Q7L2K0	433 aa		7.34	□□□□□ -1.23
MSR1-211	ENST00000520846	PNPLA5	Q7Z6Z6	429 aa	Predicted RBP	7.34	□□□□□ -1.23
MSR1-211	ENST00000520846	KRTAP9-9	Q9BYP9	154 aa		7.34	□□□□□ -1.23
MSR1-211	ENST00000520846	KRTAP9-4	Q9BYQ2	154 aa		7.34	□□□□□ -1.23
MSR1-211	ENST00000520846	ZCCHC4	Q9H5U6	513 aa		7.34	□□□□□ -1.23
MSR1-211	ENST00000520846	KANSL2	Q9H9L4	492 aa		7.34	□□□□□ -1.23
MSR1-211	ENST00000520846	SPATA6	Q9NWH7	488 aa	Predicted RBP	7.34	□□□□□ -1.23
MSR1-211	ENST00000520846		A0A1B0GTL3	188 aa		7.33	□□□□□ -1.24
MSR1-211	ENST00000520846	TCRBV5S4A2T	A0A5A2	114 aa		7.33	□□□□□ -1.24
MSR1-211	ENST00000520846	PLD2	O14939	933 aa		7.33	□□□□□ -1.24
MSR1-211	ENST00000520846	SASH1	O94885	1247 aa		7.33	□□□□□ -1.24
MSR1-211	ENST00000520846	RASGRP1	O95267	797 aa		7.33	□□□□□ -1.24
MSR1-211	ENST00000520846	PDE6A	P16499	860 aa		7.33	□□□□□ -1.24
MSR1-211	ENST00000520846	THBS2	P35442	1172 aa		7.33	□□□□□ -1.24
MSR1-211	ENST00000520846	EPHA5	P54756	1037 aa		7.33	□□□□□ -1.24
MSR1-211	ENST00000520846	LIPI	Q6XZB0	460 aa		7.33	□□□□□ -1.24
MSR1-211	ENST00000520846	ARHGAP36	Q6ZRI8	547 aa		7.33	□□□□□ -1.24
MSR1-211	ENST00000520846	TTLL7	Q6ZT98	887 aa		7.33	□□□□□ -1.24
MSR1-211	ENST00000520846	KCTD1	Q719H9	257 aa		7.33	□□□□□ -1.24
MSR1-211	ENST00000520846	BRAP	Q7Z569	592 aa		7.33	□□□□□ -1.24
MSR1-211	ENST00000520846	SP8	Q8IXZ3	490 aa		7.33	□□□□□ -1.24
MSR1-211	ENST00000520846	SCLY	Q96I15	445 aa		7.33	□□□□□ -1.24
MSR1-211	ENST00000520846	KCNC2	Q96PR1	638 aa		7.33	□□□□□ -1.24
MSR1-211	ENST00000520846	CD244	Q9BZW8	370 aa		7.33	□□□□□ -1.24
MSR1-211	ENST00000520846	PDGFD	Q9GZP0	370 aa	Predicted RBP	7.33	□□□□□ -1.24
MSR1-211	ENST00000520846	PARD6A	Q9NPB6	346 aa		7.33	□□□□□ -1.24
MSR1-211	ENST00000520846	LUC7L	Q9NQ29	371 aa	Known RBP	7.33	□□□□□ -1.24
MSR1-211	ENST00000520846	HSPBP1	Q9NZL4	362 aa		7.33	□□□□□ -1.24
MSR1-211	ENST00000520846	NTM	Q9P121	344 aa		7.33	□□□□□ -1.24
MSR1-211	ENST00000520846	CBLC	Q9ULV8	474 aa		7.33	□□□□□ -1.24
MSR1-211	ENST00000520846	TELO2	Q9Y4R8	837 aa		7.33	□□□□□ -1.24
MSR1-211	ENST00000520846	ADAMTS20	P59510	1910 aa		7.33	□□□□□ -1.24
MSR1-211	ENST00000520846	CCDC66	A2RUB6	948 aa		7.32	□□□□□ -1.24
MSR1-211	ENST00000520846	RAPGEF3	O95398	923 aa		7.32	□□□□□ -1.24
MSR1-211	ENST00000520846	DNM2	P50570	870 aa		7.32	□□□□□ -1.24
MSR1-211	ENST00000520846	SLURP1	P55000	103 aa		7.32	□□□□□ -1.24
MSR1-211	ENST00000520846	CRY1	Q16526	586 aa		7.32	□□□□□ -1.24
MSR1-211	ENST00000520846	OSTM1	Q86WC4	334 aa		7.32	□□□□□ -1.24
MSR1-211	ENST00000520846	NLGN4X	Q8N0W4	816 aa		7.32	□□□□□ -1.24
MSR1-211	ENST00000520846	SH3RF2	Q8TEC5	729 aa		7.32	□□□□□ -1.24
MSR1-211	ENST00000520846	TMEM260	Q9NX78	707 aa		7.32	□□□□□ -1.24
MSR1-211	ENST00000520846	USP35	Q9P2H5	1018 aa		7.32	□□□□□ -1.24
MSR1-211	ENST00000520846	SRPK3	Q9UPE1	567 aa		7.32	□□□□□ -1.24
MSR1-211	ENST00000520846	TCRBV16S1A1N1	A0A5B0	115 aa		7.31	□□□□□ -1.24
MSR1-211	ENST00000520846	INHBB	P09529	407 aa		7.31	□□□□□ -1.24
MSR1-211	ENST00000520846	FAH	P16930	419 aa		7.31	□□□□□ -1.24
MSR1-211	ENST00000520846	KRT15	P19012	456 aa		7.31	□□□□□ -1.24
MSR1-211	ENST00000520846	SARS	P49591	514 aa	Known RBP	7.31	□□□□□ -1.24
MSR1-211	ENST00000520846	ADAM9	Q13443	819 aa		7.31	□□□□□ -1.24
MSR1-211	ENST00000520846	PAN2	Q504Q3	1202 aa	Known RBP	7.31	□□□□□ -1.24
MSR1-211	ENST00000520846	EP400NL	Q6ZTU2	488 aa		7.31	□□□□□ -1.24
MSR1-211	ENST00000520846	FGD2	Q7Z6J4	655 aa		7.31	□□□□□ -1.24
MSR1-211	ENST00000520846	CARF	Q8N187	725 aa		7.31	□□□□□ -1.24
MSR1-211	ENST00000520846	RNPC3	Q96LT9	517 aa	Known RBP	7.31	□□□□□ -1.24
MSR1-211	ENST00000520846	TMEM209	Q96SK2	561 aa		7.31	□□□□□ -1.24
MSR1-211	ENST00000520846	TRIM39	Q9HCM9	518 aa		7.31	□□□□□ -1.24
MSR1-211	ENST00000520846	AMY2A	P04746	511 aa		7.3	□□□□□ -1.24
MSR1-211	ENST00000520846	CKM	P06732	381 aa		7.3	□□□□□ -1.24
MSR1-211	ENST00000520846	AMY2B	P19961	511 aa		7.3	□□□□□ -1.24
MSR1-211	ENST00000520846	RPL13	P26373	211 aa	Known RBP	7.3	□□□□□ -1.24

Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms