RNA–Protein interactions for RNA: ENST00000520846.1

MSR1-211, Transcript of macrophage scavenger receptor 1, humanhuman

TSL 4

Gene MSR1, Length 373 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSR1-211ENST00000520846 AEBP2Q6ZN18 517 aaPredicted RBP28.03■■■□□ 2.08
MSR1-211ENST00000520846 CHIC1Q5VXU3 224 aa27.31■■□□□ 1.96
MSR1-211ENST00000520846 PHF23Q9BUL5 403 aaPredicted RBP24.01■■□□□ 1.43
MSR1-211ENST00000520846 SENP3Q9H4L4 574 aaPredicted RBP23.83■■□□□ 1.41
MSR1-211ENST00000520846 PLPPR3Q6T4P5 718 aa22.17■■□□□ 1.14
MSR1-211ENST00000520846 FOXD1Q16676 465 aa22.1■■□□□ 1.13
MSR1-211ENST00000520846 PPP6R1Q9UPN7 881 aa21.22■□□□□ 0.99
MSR1-211ENST00000520846 ADRA2BP18089 450 aa21.2■□□□□ 0.98
MSR1-211ENST00000520846 PIAS4Q8N2W9 510 aaPredicted RBP20.84■□□□□ 0.93
MSR1-211ENST00000520846 MSH5O43196 834 aa20.42■□□□□ 0.86
MSR1-211ENST00000520846 PPP4R3CPQ6ZMV5 832 aa19.51■□□□□ 0.71
MSR1-211ENST00000520846 SCAF1Q9H7N4 1312 aaKnown RBP19.43■□□□□ 0.7
MSR1-211ENST00000520846 MAPK8IP2Q13387 824 aaPredicted RBP19.25■□□□□ 0.67
MSR1-211ENST00000520846 NCBP3Q53F19 620 aaKnown RBP19■□□□□ 0.63
MSR1-211ENST00000520846 DMRT2Q9Y5R5 561 aa19■□□□□ 0.63
MSR1-211ENST00000520846 CNKSR2Q8WXI2 1034 aa18.99■□□□□ 0.63
MSR1-211ENST00000520846 KCNA4P22459 653 aa18.98■□□□□ 0.63
MSR1-211ENST00000520846 POTEDQ86YR6 584 aa18.71■□□□□ 0.59
MSR1-211ENST00000520846 NPM3O75607 178 aaKnown RBP18.7■□□□□ 0.58
MSR1-211ENST00000520846 RNF216Q9NWF9 866 aaPredicted RBP18.63■□□□□ 0.57
MSR1-211ENST00000520846 HOXD11P31277 338 aaPredicted RBP18.57■□□□□ 0.56
MSR1-211ENST00000520846 DCAF8L1A6NGE4 600 aa18.2■□□□□ 0.5
MSR1-211ENST00000520846 DNAJC5BQ9UF47 199 aa18.17■□□□□ 0.5
MSR1-211ENST00000520846 SLC4A1APQ9BWU0 796 aaKnown RBP18.07■□□□□ 0.48
MSR1-211ENST00000520846 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.72■□□□□ 0.43
MSR1-211ENST00000520846 SLC4A2P04920 1241 aa17.67■□□□□ 0.42
MSR1-211ENST00000520846 RNF39Q9H2S5 420 aa17.49■□□□□ 0.39
MSR1-211ENST00000520846 FOXD4L1Q9NU39 408 aa17.49■□□□□ 0.39
MSR1-211ENST00000520846 EHMT2Q96KQ7 1210 aa17.47■□□□□ 0.39
MSR1-211ENST00000520846 ZBTB22O15209 634 aa17.45■□□□□ 0.38
MSR1-211ENST00000520846 U3KPZ7 1027 aaPredicted RBP17.41■□□□□ 0.38
MSR1-211ENST00000520846 CSRNP3Q8WYN3 585 aa17.3■□□□□ 0.36
MSR1-211ENST00000520846 MYCNP04198 464 aaPredicted RBP17.29■□□□□ 0.36
MSR1-211ENST00000520846 C1QBPQ07021 282 aaKnown RBP17.29■□□□□ 0.36
MSR1-211ENST00000520846 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.19■□□□□ 0.34
MSR1-211ENST00000520846 HNRNPUL2Q1KMD3 747 aaKnown RBP17.19■□□□□ 0.34
MSR1-211ENST00000520846 SAMD1Q6SPF0 538 aaPredicted RBP17.12■□□□□ 0.33
MSR1-211ENST00000520846 CACNB1Q02641 598 aaPredicted RBP17.1■□□□□ 0.33
MSR1-211ENST00000520846 APLP2Q06481 763 aa17.03■□□□□ 0.32
MSR1-211ENST00000520846 SPINK5Q9NQ38 1064 aaPredicted RBP16.94■□□□□ 0.3
MSR1-211ENST00000520846 ATXN8OSP0DMR3 200 aa16.9■□□□□ 0.3
MSR1-211ENST00000520846 CAPN15O75808 1086 aa16.89■□□□□ 0.29
MSR1-211ENST00000520846 ATF5Q9Y2D1 282 aaPredicted RBP16.82■□□□□ 0.28
MSR1-211ENST00000520846 TRHP20396 242 aaPredicted RBP16.8■□□□□ 0.28
MSR1-211ENST00000520846 ZNF219Q9P2Y4 722 aaPredicted RBP16.8■□□□□ 0.28
MSR1-211ENST00000520846 DSG3P32926 999 aa16.61■□□□□ 0.25
MSR1-211ENST00000520846 ABCB7O75027 752 aa16.56■□□□□ 0.24
MSR1-211ENST00000520846 POLA2Q14181 598 aa16.51■□□□□ 0.23
MSR1-211ENST00000520846 ZBTB12Q9Y330 459 aaPredicted RBP16.25■□□□□ 0.19
MSR1-211ENST00000520846 FBLN2P98095 1184 aa16.15■□□□□ 0.18
MSR1-211ENST00000520846 MKRN4PQ13434 485 aaPredicted RBP16.09■□□□□ 0.17
MSR1-211ENST00000520846 OSCARQ8IYS5 282 aa15.94■□□□□ 0.14
MSR1-211ENST00000520846 RBM42Q9BTD8 480 aaKnown RBP15.86■□□□□ 0.13
MSR1-211ENST00000520846 SPDYE2BA6NHP3 402 aa15.79■□□□□ 0.12
MSR1-211ENST00000520846 SPDYE6P0CI01 402 aa15.79■□□□□ 0.12
MSR1-211ENST00000520846 SPDYE2Q495Y8 402 aa15.79■□□□□ 0.12
MSR1-211ENST00000520846 ZNF692Q9BU19 519 aaPredicted RBP15.73■□□□□ 0.11
MSR1-211ENST00000520846 SPDYE4A6NLX3 237 aa15.71■□□□□ 0.11
MSR1-211ENST00000520846 FKBP8Q14318 412 aa15.65■□□□□ 0.1
MSR1-211ENST00000520846 SSUH2Q9Y2M2 353 aa15.65■□□□□ 0.1
MSR1-211ENST00000520846 AKT1S1Q96B36 256 aa15.64■□□□□ 0.09
MSR1-211ENST00000520846 PABPN1Q86U42 306 aaKnown RBP eCLIP15.51■□□□□ 0.07
MSR1-211ENST00000520846 REM2Q8IYK8 340 aaPredicted RBP15.49■□□□□ 0.07
MSR1-211ENST00000520846 PROM2Q8N271 834 aa15.42■□□□□ 0.06
MSR1-211ENST00000520846 SPDYE1Q8NFV5 336 aaPredicted RBP15.35■□□□□ 0.05
MSR1-211ENST00000520846 PITPNM1O00562 1244 aa15.3■□□□□ 0.04
MSR1-211ENST00000520846 CLEC11AQ9Y240 323 aa15.28■□□□□ 0.04
MSR1-211ENST00000520846 STAG3Q9UJ98 1225 aa15.25■□□□□ 0.03
MSR1-211ENST00000520846 CHRDL2Q6WN34 429 aa15.22■□□□□ 0.03
MSR1-211ENST00000520846 PRR29P0C7W0 189 aa15.14■□□□□ 0.01
MSR1-211ENST00000520846 FBXO3Q9UK99 471 aa15.14■□□□□ 0.01
MSR1-211ENST00000520846 FXR2P51116 673 aaKnown RBP eCLIP15.03■□□□□ -0
MSR1-211ENST00000520846 PIP4P2Q8N4L2 257 aa15□□□□□ -0.01
MSR1-211ENST00000520846 PRKAR2AP13861 404 aaKnown RBP14.92□□□□□ -0.02
MSR1-211ENST00000520846 MIER1Q8N108 512 aa14.92□□□□□ -0.02
MSR1-211ENST00000520846 VASPP50552 380 aaPredicted RBP14.91□□□□□ -0.02
MSR1-211ENST00000520846 CREBZFQ9NS37 354 aa14.91□□□□□ -0.02
MSR1-211ENST00000520846 CHADLQ6NUI6 762 aa14.9□□□□□ -0.02
MSR1-211ENST00000520846 PLCD3Q8N3E9 789 aa14.89□□□□□ -0.03
MSR1-211ENST00000520846 PLEKHG5O94827 1062 aa14.86□□□□□ -0.03
MSR1-211ENST00000520846 POTEHQ6S545 545 aa14.82□□□□□ -0.04
MSR1-211ENST00000520846 FARP1Q9Y4F1 1045 aaPredicted RBP14.76□□□□□ -0.05
MSR1-211ENST00000520846 MNX1P50219 401 aaPredicted RBP14.74□□□□□ -0.05
MSR1-211ENST00000520846 ZBTB47Q9UFB7 747 aaPredicted RBP14.74□□□□□ -0.05
MSR1-211ENST00000520846 IFNLR1Q8IU57 520 aaPredicted RBP14.7□□□□□ -0.06
MSR1-211ENST00000520846 KLHL34Q8N239 644 aa14.7□□□□□ -0.06
MSR1-211ENST00000520846 NPM1P06748 294 aaKnown RBP eCLIP14.68□□□□□ -0.06
MSR1-211ENST00000520846 HAX1O00165 279 aa14.56□□□□□ -0.08
MSR1-211ENST00000520846 SPOCK2Q92563 424 aa14.55□□□□□ -0.08
MSR1-211ENST00000520846 C19orf67A6NJJ6 358 aa14.52□□□□□ -0.09
MSR1-211ENST00000520846 NUBP1P53384 320 aa14.52□□□□□ -0.09
MSR1-211ENST00000520846 CD44P16070 742 aaKnown RBP14.49□□□□□ -0.09
MSR1-211ENST00000520846 RASEFQ8IZ41 740 aa14.48□□□□□ -0.09
MSR1-211ENST00000520846 PAK3O75914 559 aaPredicted RBP14.45□□□□□ -0.1
MSR1-211ENST00000520846 FAM212AQ96EL1 285 aa14.43□□□□□ -0.1
MSR1-211ENST00000520846 TSPYL2Q9H2G4 693 aaPredicted RBP14.43□□□□□ -0.1
MSR1-211ENST00000520846 EVX2Q03828 476 aa14.4□□□□□ -0.1
MSR1-211ENST00000520846 ZRANB1Q9UGI0 708 aa14.4□□□□□ -0.1
MSR1-211ENST00000520846 DCAF8Q5TAQ9 597 aa14.39□□□□□ -0.11
MSR1-211ENST00000520846 GSE1Q14687 1217 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms