RNA–Protein interactions for RNA: ENST00000520790.1

PCDHGB6-201, Transcript of protocadherin gamma subfamily B, 6, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGB6, Length 4,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB6-201ENST00000520790 SKIDA1Q1XH10 827 aa13.06□□□□□ -0.32
PCDHGB6-201ENST00000520790 C1orf228Q6PIY5 440 aa13.06□□□□□ -0.32
PCDHGB6-201ENST00000520790 C7orf61Q8IZ16 206 aa13.06□□□□□ -0.32
PCDHGB6-201ENST00000520790 PPP1R13LQ8WUF5 828 aa13.06□□□□□ -0.32
PCDHGB6-201ENST00000520790 NXF1Q9UBU9 619 aaKnown RBP13.06□□□□□ -0.32
PCDHGB6-201ENST00000520790 UBE2HP62256 183 aa13.05□□□□□ -0.32
PCDHGB6-201ENST00000520790 CREBZFQ9NS37 354 aa13.05□□□□□ -0.32
PCDHGB6-201ENST00000520790 ZC3H4Q9UPT8 1303 aaKnown RBP13.05□□□□□ -0.32
PCDHGB6-201ENST00000520790 MSCO60682 206 aa13.05□□□□□ -0.32
PCDHGB6-201ENST00000520790 CNTN2Q02246 1040 aa13.05□□□□□ -0.32
PCDHGB6-201ENST00000520790 CAPN9O14815 690 aa13.05□□□□□ -0.32
PCDHGB6-201ENST00000520790 EIF3JO75822 258 aaKnown RBP13.05□□□□□ -0.32
PCDHGB6-201ENST00000520790 TOPORSQ9NS56 1045 aaPredicted RBP13.05□□□□□ -0.32
PCDHGB6-201ENST00000520790 CHD2O14647 1828 aaKnown RBP13.05□□□□□ -0.32
PCDHGB6-201ENST00000520790 AHDC1Q5TGY3 1603 aaPredicted RBP13.05□□□□□ -0.32
PCDHGB6-201ENST00000520790 SFPQP23246 707 aaKnown RBP eCLIP13.05□□□□□ -0.32
PCDHGB6-201ENST00000520790 SHMT1P34896 483 aa13.05□□□□□ -0.32
PCDHGB6-201ENST00000520790 ARHGAP29Q52LW3 1261 aa13.05□□□□□ -0.32
PCDHGB6-201ENST00000520790 CCDC183Q5T5S1 534 aa13.05□□□□□ -0.32
PCDHGB6-201ENST00000520790 RNF149Q8NC42 400 aa13.05□□□□□ -0.32
PCDHGB6-201ENST00000520790 PCIF1Q9H4Z3 704 aa13.05□□□□□ -0.32
PCDHGB6-201ENST00000520790 NFIBO00712 420 aa13.04□□□□□ -0.32
PCDHGB6-201ENST00000520790 MAP2K2P36507 400 aa13.04□□□□□ -0.32
PCDHGB6-201ENST00000520790 QARSP47897 775 aaKnown RBP13.04□□□□□ -0.32
PCDHGB6-201ENST00000520790 ARMCX2Q7L311 632 aa13.04□□□□□ -0.32
PCDHGB6-201ENST00000520790 PANK4Q9NVE7 773 aa13.04□□□□□ -0.32
PCDHGB6-201ENST00000520790 CUTAO60888 179 aa13.04□□□□□ -0.32
PCDHGB6-201ENST00000520790 YEATS4O95619 227 aa13.04□□□□□ -0.32
PCDHGB6-201ENST00000520790 ICAM1P05362 532 aa13.04□□□□□ -0.32
PCDHGB6-201ENST00000520790 TAL1P17542 331 aaPredicted RBP13.04□□□□□ -0.32
PCDHGB6-201ENST00000520790 TNNC1P63316 161 aa13.04□□□□□ -0.32
PCDHGB6-201ENST00000520790 CSGALNACT2Q8N6G5 542 aa13.04□□□□□ -0.32
PCDHGB6-201ENST00000520790 HESX1Q9UBX0 185 aa13.04□□□□□ -0.32
PCDHGB6-201ENST00000520790 ADCYAP1R1P41586 468 aa13.04□□□□□ -0.32
PCDHGB6-201ENST00000520790 C8orf34Q49A92 452 aa13.04□□□□□ -0.32
PCDHGB6-201ENST00000520790 GPR142Q7Z601 462 aa13.04□□□□□ -0.32
PCDHGB6-201ENST00000520790 TLK2Q86UE8 772 aa13.04□□□□□ -0.32
PCDHGB6-201ENST00000520790 TRMT44Q8IYL2 757 aaKnown RBP13.04□□□□□ -0.32
PCDHGB6-201ENST00000520790 ERAP1Q9NZ08 941 aa13.04□□□□□ -0.32
PCDHGB6-201ENST00000520790 NALCNQ8IZF0 1738 aa13.03□□□□□ -0.32
PCDHGB6-201ENST00000520790 VWA5AO00534 786 aa13.03□□□□□ -0.32
PCDHGB6-201ENST00000520790 C2CD2LO14523 706 aa13.03□□□□□ -0.32
PCDHGB6-201ENST00000520790 MAP2K5Q13163 448 aa13.03□□□□□ -0.32
PCDHGB6-201ENST00000520790 FERMT1Q9BQL6 677 aa13.03□□□□□ -0.32
PCDHGB6-201ENST00000520790 EHD4Q9H223 541 aa13.03□□□□□ -0.32
PCDHGB6-201ENST00000520790 PRG3Q9Y2Y8 225 aaPredicted RBP13.03□□□□□ -0.32
PCDHGB6-201ENST00000520790 C17orf102A2RUQ5 167 aa13.03□□□□□ -0.32
PCDHGB6-201ENST00000520790 GLB1LQ6UWU2 654 aa13.03□□□□□ -0.32
PCDHGB6-201ENST00000520790 LRRC71Q8N4P6 559 aa13.03□□□□□ -0.32
PCDHGB6-201ENST00000520790 CLIC6Q96NY7 704 aa13.03□□□□□ -0.32
PCDHGB6-201ENST00000520790 SNX25Q9H3E2 840 aa13.03□□□□□ -0.32
PCDHGB6-201ENST00000520790 ATP6V0A4Q9HBG4 840 aa13.03□□□□□ -0.32
PCDHGB6-201ENST00000520790 LY9Q9HBG7 655 aa13.03□□□□□ -0.32
PCDHGB6-201ENST00000520790 POTEMA6NI47 508 aa13.03□□□□□ -0.32
PCDHGB6-201ENST00000520790 PTGS1P23219 599 aa13.03□□□□□ -0.32
PCDHGB6-201ENST00000520790 CDR1P51861 262 aa13.03□□□□□ -0.32
PCDHGB6-201ENST00000520790 ACVR2BQ13705 512 aa13.03□□□□□ -0.32
PCDHGB6-201ENST00000520790 FAM26FQ5R3K3 315 aa13.03□□□□□ -0.32
PCDHGB6-201ENST00000520790 SCN4BQ8IWT1 228 aa13.03□□□□□ -0.32
PCDHGB6-201ENST00000520790 TMEM169Q96HH4 297 aa13.03□□□□□ -0.32
PCDHGB6-201ENST00000520790 INTS4Q96HW7 963 aaKnown RBP13.03□□□□□ -0.32
PCDHGB6-201ENST00000520790 SLC39A2Q9NP94 309 aa13.03□□□□□ -0.32
PCDHGB6-201ENST00000520790 MSRAQ9UJ68 235 aa13.03□□□□□ -0.32
PCDHGB6-201ENST00000520790 POSTNQ15063 836 aa13.03□□□□□ -0.32
PCDHGB6-201ENST00000520790 NECTIN1Q15223 517 aa13.03□□□□□ -0.32
PCDHGB6-201ENST00000520790 STX1AQ16623 288 aa13.03□□□□□ -0.32
PCDHGB6-201ENST00000520790 PFKFB3Q16875 520 aaPredicted RBP13.03□□□□□ -0.32
PCDHGB6-201ENST00000520790 TREML2Q5T2D2 321 aa13.03□□□□□ -0.32
PCDHGB6-201ENST00000520790 DYDC2Q96IM9 177 aa13.03□□□□□ -0.32
PCDHGB6-201ENST00000520790 TINF2Q9BSI4 451 aa13.03□□□□□ -0.32
PCDHGB6-201ENST00000520790 JMJD4Q9H9V9 463 aa13.03□□□□□ -0.32
PCDHGB6-201ENST00000520790 RPF1Q9H9Y2 349 aaKnown RBP13.03□□□□□ -0.32
PCDHGB6-201ENST00000520790 SYNJ2BP-COX16A0A087WUM0 186 aa13.02□□□□□ -0.32
PCDHGB6-201ENST00000520790 PEX10O60683 326 aa13.02□□□□□ -0.32
PCDHGB6-201ENST00000520790 HMGCRP04035 888 aa13.02□□□□□ -0.32
PCDHGB6-201ENST00000520790 SFNP31947 248 aa13.02□□□□□ -0.32
PCDHGB6-201ENST00000520790 ACTN2P35609 894 aa13.02□□□□□ -0.32
PCDHGB6-201ENST00000520790 PAK2Q13177 524 aa13.02□□□□□ -0.32
PCDHGB6-201ENST00000520790 ZNF568Q3ZCX4 644 aa13.02□□□□□ -0.32
PCDHGB6-201ENST00000520790 ELMOD1Q8N336 334 aa13.02□□□□□ -0.32
PCDHGB6-201ENST00000520790 MCPH1Q8NEM0 835 aa13.02□□□□□ -0.32
PCDHGB6-201ENST00000520790 FAM163AQ96GL9 167 aaPredicted RBP13.02□□□□□ -0.32
PCDHGB6-201ENST00000520790 COX16Q9P0S2 106 aa13.02□□□□□ -0.32
PCDHGB6-201ENST00000520790 DAPK3O43293 454 aa13.02□□□□□ -0.33
PCDHGB6-201ENST00000520790 TDP2O95551 362 aa13.02□□□□□ -0.33
PCDHGB6-201ENST00000520790 PRELPP51888 382 aa13.02□□□□□ -0.33
PCDHGB6-201ENST00000520790 ARHGAP44Q17R89 818 aa13.02□□□□□ -0.33
PCDHGB6-201ENST00000520790 SRBD1Q8N5C6 995 aaKnown RBP13.02□□□□□ -0.33
PCDHGB6-201ENST00000520790 TMEM110-MUSTN1A8MSY1 372 aa13.02□□□□□ -0.33
PCDHGB6-201ENST00000520790 CPB1P15086 417 aa13.02□□□□□ -0.33
PCDHGB6-201ENST00000520790 KRT17Q04695 432 aa13.02□□□□□ -0.33
PCDHGB6-201ENST00000520790 SPAG1Q07617 926 aa13.02□□□□□ -0.33
PCDHGB6-201ENST00000520790 TEX35Q5T0J7 233 aa13.02□□□□□ -0.33
PCDHGB6-201ENST00000520790 SEPT8Q92599 483 aa13.02□□□□□ -0.33
PCDHGB6-201ENST00000520790 ARHGEF37A1IGU5 675 aa13.01□□□□□ -0.33
PCDHGB6-201ENST00000520790 CLDN3O15551 220 aa13.01□□□□□ -0.33
PCDHGB6-201ENST00000520790 PRKCZQ05513 592 aa13.01□□□□□ -0.33
PCDHGB6-201ENST00000520790 FSCN1Q16658 493 aaKnown RBP13.01□□□□□ -0.33
PCDHGB6-201ENST00000520790 IFNL1Q8IU54 200 aa13.01□□□□□ -0.33
PCDHGB6-201ENST00000520790 NEK11Q8NG66 645 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms