RNA–Protein interactions for RNA: ENST00000520755.5

LSM1-203, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

TSL 1 (best) BASIC

Gene LSM1, Length 975 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-203ENST00000520755 Q4G0T1 1027 aa17.35■□□□□ 0.37
LSM1-203ENST00000520755 PRR16Q569H4 304 aa17.35■□□□□ 0.37
LSM1-203ENST00000520755 CLEC17AQ6ZS10 378 aa17.35■□□□□ 0.37
LSM1-203ENST00000520755 PLA2G4DQ86XP0 818 aa17.35■□□□□ 0.37
LSM1-203ENST00000520755 CDHR1Q96JP9 859 aa17.35■□□□□ 0.37
LSM1-203ENST00000520755 ZNF396Q96N95 335 aaPredicted RBP17.35■□□□□ 0.37
LSM1-203ENST00000520755 UIMC1Q96RL1 719 aa17.35■□□□□ 0.37
LSM1-203ENST00000520755 SPC25Q9HBM1 224 aa17.35■□□□□ 0.37
LSM1-203ENST00000520755 KCNH7Q9NS40 1196 aa17.35■□□□□ 0.37
LSM1-203ENST00000520755 DDX25Q9UHL0 483 aaKnown RBP17.35■□□□□ 0.37
LSM1-203ENST00000520755 MYADML2A6NDP7 307 aa17.34■□□□□ 0.37
LSM1-203ENST00000520755 MEIS1O00470 390 aa17.34■□□□□ 0.37
LSM1-203ENST00000520755 NEMFO60524 1076 aa17.34■□□□□ 0.37
LSM1-203ENST00000520755 ADAMTS4O75173 837 aa17.34■□□□□ 0.37
LSM1-203ENST00000520755 BAG4O95429 457 aaKnown RBP17.34■□□□□ 0.37
LSM1-203ENST00000520755 GGPS1O95749 300 aa17.34■□□□□ 0.37
LSM1-203ENST00000520755 GH1P01241 217 aa17.34■□□□□ 0.37
LSM1-203ENST00000520755 TGFB3P10600 412 aa17.34■□□□□ 0.37
LSM1-203ENST00000520755 GJA9P57773 515 aa17.34■□□□□ 0.37
LSM1-203ENST00000520755 KRT85P78386 507 aa17.34■□□□□ 0.37
LSM1-203ENST00000520755 ATP2C1P98194 919 aaPredicted RBP17.34■□□□□ 0.37
LSM1-203ENST00000520755 ARHGAP1Q07960 439 aa17.34■□□□□ 0.37
LSM1-203ENST00000520755 ORC2Q13416 577 aaPredicted RBP17.34■□□□□ 0.37
LSM1-203ENST00000520755 LRRC41Q15345 812 aa17.34■□□□□ 0.37
LSM1-203ENST00000520755 NIPA1Q7RTP0 329 aa17.34■□□□□ 0.37
LSM1-203ENST00000520755 RNF180Q86T96 592 aa17.34■□□□□ 0.37
LSM1-203ENST00000520755 DHX37Q8IY37 1157 aaKnown RBP17.34■□□□□ 0.37
LSM1-203ENST00000520755 ARRDC4Q8NCT1 418 aa17.34■□□□□ 0.37
LSM1-203ENST00000520755 ETNPPLQ8TBG4 499 aa17.34■□□□□ 0.37
LSM1-203ENST00000520755 UPF3AQ9H1J1 476 aaKnown RBP17.34■□□□□ 0.37
LSM1-203ENST00000520755 KCNMB3Q9NPA1 279 aa17.34■□□□□ 0.37
LSM1-203ENST00000520755 Q9Y3F1 56 aa17.34■□□□□ 0.37
LSM1-203ENST00000520755 ATP9AO75110 1047 aa17.33■□□□□ 0.36
LSM1-203ENST00000520755 CAPN15O75808 1086 aa17.33■□□□□ 0.36
LSM1-203ENST00000520755 YEATS4O95619 227 aa17.33■□□□□ 0.36
LSM1-203ENST00000520755 BEX3Q00994 111 aa17.33■□□□□ 0.36
LSM1-203ENST00000520755 SETQ01105 290 aaPredicted RBP17.33■□□□□ 0.36
LSM1-203ENST00000520755 NEDD9Q14511 834 aa17.33■□□□□ 0.36
LSM1-203ENST00000520755 FSCN1Q16658 493 aaKnown RBP17.33■□□□□ 0.36
LSM1-203ENST00000520755 GNASQ5JWF2 1037 aa17.33■□□□□ 0.36
LSM1-203ENST00000520755 CELF3Q5SZQ8 465 aaKnown RBP17.33■□□□□ 0.36
LSM1-203ENST00000520755 ATL3Q6DD88 541 aa17.33■□□□□ 0.36
LSM1-203ENST00000520755 LINC00301Q8NCQ3 95 aa17.33■□□□□ 0.36
LSM1-203ENST00000520755 HAS1Q92839 578 aa17.33■□□□□ 0.36
LSM1-203ENST00000520755 GJA10Q969M2 543 aa17.33■□□□□ 0.36
LSM1-203ENST00000520755 MTMR9Q96QG7 549 aa17.33■□□□□ 0.36
LSM1-203ENST00000520755 NAP1L4Q99733 375 aaKnown RBP17.33■□□□□ 0.36
LSM1-203ENST00000520755 BCAS3Q9H6U6 928 aa17.33■□□□□ 0.36
LSM1-203ENST00000520755 MLXIPQ9HAP2 919 aa17.33■□□□□ 0.36
LSM1-203ENST00000520755 GDPD2Q9HCC8 539 aa17.33■□□□□ 0.36
LSM1-203ENST00000520755 AGO4Q9HCK5 861 aaKnown RBP17.33■□□□□ 0.36
LSM1-203ENST00000520755 KBTBD13C9JR72 458 aa17.32■□□□□ 0.36
LSM1-203ENST00000520755 CTAGE5O15320 804 aa17.32■□□□□ 0.36
LSM1-203ENST00000520755 MSH4O15457 936 aa17.32■□□□□ 0.36
LSM1-203ENST00000520755 MAFGO15525 162 aa17.32■□□□□ 0.36
LSM1-203ENST00000520755 KCNA2P16389 499 aa17.32■□□□□ 0.36
LSM1-203ENST00000520755 NCLP19338 710 aaKnown RBP17.32■□□□□ 0.36
LSM1-203ENST00000520755 SP4Q02446 784 aa17.32■□□□□ 0.36
LSM1-203ENST00000520755 PTGDRQ13258 359 aa17.32■□□□□ 0.36
LSM1-203ENST00000520755 LAMC2Q13753 1193 aa17.32■□□□□ 0.36
LSM1-203ENST00000520755 SLC39A14Q15043 492 aa17.32■□□□□ 0.36
LSM1-203ENST00000520755 CYFIP1Q7L576 1253 aa17.32■□□□□ 0.36
LSM1-203ENST00000520755 AFG1LQ8WV93 481 aa17.32■□□□□ 0.36
LSM1-203ENST00000520755 LEO1Q8WVC0 666 aaPredicted RBP17.32■□□□□ 0.36
LSM1-203ENST00000520755 SENP7Q9BQF6 1050 aa17.32■□□□□ 0.36
LSM1-203ENST00000520755 MORC2Q9Y6X9 1032 aaPredicted RBP17.32■□□□□ 0.36
LSM1-203ENST00000520755 ARID2Q68CP9 1835 aa17.32■□□□□ 0.36
LSM1-203ENST00000520755 MYH9P35579 1960 aaKnown RBP17.31■□□□□ 0.36
LSM1-203ENST00000520755 DNM1LO00429 736 aa17.31■□□□□ 0.36
LSM1-203ENST00000520755 FARP2O94887 1054 aaPredicted RBP17.31■□□□□ 0.36
LSM1-203ENST00000520755 OR52Z1P0C646 297 aa17.31■□□□□ 0.36
LSM1-203ENST00000520755 CPT1AP50416 773 aa17.31■□□□□ 0.36
LSM1-203ENST00000520755 ITGB3BPQ13352 177 aaPredicted RBP17.31■□□□□ 0.36
LSM1-203ENST00000520755 IL17AQ16552 155 aa17.31■□□□□ 0.36
LSM1-203ENST00000520755 ANKLE1Q8NAG6 615 aa17.31■□□□□ 0.36
LSM1-203ENST00000520755 GIMAP8Q8ND71 665 aaPredicted RBP17.31■□□□□ 0.36
LSM1-203ENST00000520755 KLHDC9Q8NEP7 349 aa17.31■□□□□ 0.36
LSM1-203ENST00000520755 DIS3LQ8TF46 1054 aaKnown RBP17.31■□□□□ 0.36
LSM1-203ENST00000520755 SPATA33Q96N06 139 aa17.31■□□□□ 0.36
LSM1-203ENST00000520755 SDF4Q9BRK5 362 aa17.31■□□□□ 0.36
LSM1-203ENST00000520755 ZNF577Q9BSK1 485 aa17.31■□□□□ 0.36
LSM1-203ENST00000520755 DDX39AO00148 427 aaKnown RBP17.3■□□□□ 0.36
LSM1-203ENST00000520755 IPO5O00410 1097 aaKnown RBP17.3■□□□□ 0.36
LSM1-203ENST00000520755 CAPN2P17655 700 aa17.3■□□□□ 0.36
LSM1-203ENST00000520755 MNX1P50219 401 aaPredicted RBP17.3■□□□□ 0.36
LSM1-203ENST00000520755 GRIN1Q05586 938 aa17.3■□□□□ 0.36
LSM1-203ENST00000520755 STK38Q15208 465 aa17.3■□□□□ 0.36
LSM1-203ENST00000520755 KCNA10Q16322 511 aa17.3■□□□□ 0.36
LSM1-203ENST00000520755 CALCRLQ16602 461 aa17.3■□□□□ 0.36
LSM1-203ENST00000520755 BRDTQ58F21 947 aaPredicted RBP17.3■□□□□ 0.36
LSM1-203ENST00000520755 METTL7BQ6UX53 244 aa17.3■□□□□ 0.36
LSM1-203ENST00000520755 PCSK9Q8NBP7 692 aaKnown RBP17.3■□□□□ 0.36
LSM1-203ENST00000520755 SLC5A5Q92911 643 aa17.3■□□□□ 0.36
LSM1-203ENST00000520755 EMID1Q96A84 441 aaPredicted RBP17.3■□□□□ 0.36
LSM1-203ENST00000520755 FBXO2Q9UK22 296 aaPredicted RBP17.3■□□□□ 0.36
LSM1-203ENST00000520755 RCOR1Q9UKL0 485 aa17.3■□□□□ 0.36
LSM1-203ENST00000520755 CFAP45Q9UL16 551 aa17.3■□□□□ 0.36
LSM1-203ENST00000520755 LOXHD1Q8IVV2 1947 aa17.29■□□□□ 0.36
LSM1-203ENST00000520755 A6NJR5 290 aa17.29■□□□□ 0.36
LSM1-203ENST00000520755 NOP56O00567 594 aaKnown RBP17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms