RNA–Protein interactions for RNA: ENST00000520337.1

CTHRC1-203, Transcript of collagen triple helix repeat containing 1, humanhuman

TSL 1 (best) BASIC

Gene CTHRC1, Length 1,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-203ENST00000520337 HOXD8P13378 290 aaPredicted RBP9.12□□□□□ -0.95
CTHRC1-203ENST00000520337 ITGB7P26010 798 aa9.12□□□□□ -0.95
CTHRC1-203ENST00000520337 SOX18P35713 384 aa9.12□□□□□ -0.95
CTHRC1-203ENST00000520337 EPS15P42566 896 aa9.12□□□□□ -0.95
CTHRC1-203ENST00000520337 JAG1P78504 1218 aa9.12□□□□□ -0.95
CTHRC1-203ENST00000520337 HMGN5P82970 282 aaKnown RBP9.12□□□□□ -0.95
CTHRC1-203ENST00000520337 PPP2R5BQ15173 497 aa9.12□□□□□ -0.95
CTHRC1-203ENST00000520337 SHROOM1Q2M3G4 852 aaPredicted RBP9.12□□□□□ -0.95
CTHRC1-203ENST00000520337 KIF4BQ2VIQ3 1234 aa9.12□□□□□ -0.95
CTHRC1-203ENST00000520337 PERM1Q5SV97 790 aa9.12□□□□□ -0.95
CTHRC1-203ENST00000520337 LARP1BQ659C4 914 aaKnown RBP9.12□□□□□ -0.95
CTHRC1-203ENST00000520337 SYNE3Q6ZMZ3 975 aa9.12□□□□□ -0.95
CTHRC1-203ENST00000520337 CATIPQ7Z7H3 387 aa9.12□□□□□ -0.95
CTHRC1-203ENST00000520337 NBPF11Q86T75 865 aa9.12□□□□□ -0.95
CTHRC1-203ENST00000520337 ETFBKMTQ8IXQ9 262 aa9.12□□□□□ -0.95
CTHRC1-203ENST00000520337 FMR1NBQ8N0W7 255 aaPredicted RBP9.12□□□□□ -0.95
CTHRC1-203ENST00000520337 LENG1Q96BZ8 264 aaPredicted RBP9.12□□□□□ -0.95
CTHRC1-203ENST00000520337 CEP95Q96GE4 821 aa9.12□□□□□ -0.95
CTHRC1-203ENST00000520337 CCDC17Q96LX7 622 aa9.12□□□□□ -0.95
CTHRC1-203ENST00000520337 TEPSINQ96N21 525 aa9.12□□□□□ -0.95
CTHRC1-203ENST00000520337 TMEM47Q9BQJ4 181 aa9.12□□□□□ -0.95
CTHRC1-203ENST00000520337 TMEM39BQ9GZU3 492 aa9.12□□□□□ -0.95
CTHRC1-203ENST00000520337 VEZTQ9HBM0 779 aa9.12□□□□□ -0.95
CTHRC1-203ENST00000520337 KCNMB2Q9Y691 235 aa9.12□□□□□ -0.95
CTHRC1-203ENST00000520337 SCN4AP35499 1836 aa9.12□□□□□ -0.95
CTHRC1-203ENST00000520337 WDR33Q9C0J8 1336 aaKnown RBP9.11□□□□□ -0.95
CTHRC1-203ENST00000520337 PSAPP07602 524 aa9.11□□□□□ -0.95
CTHRC1-203ENST00000520337 CALM1P0DP23 149 aa9.11□□□□□ -0.95
CTHRC1-203ENST00000520337 CALM2P0DP24 149 aa9.11□□□□□ -0.95
CTHRC1-203ENST00000520337 CALM3P0DP25 149 aa9.11□□□□□ -0.95
CTHRC1-203ENST00000520337 ZSCAN22P10073 491 aaPredicted RBP9.11□□□□□ -0.95
CTHRC1-203ENST00000520337 IFNAR1P17181 557 aa9.11□□□□□ -0.95
CTHRC1-203ENST00000520337 PDCP20941 246 aa9.11□□□□□ -0.95
CTHRC1-203ENST00000520337 GUCY1A2P33402 732 aa9.11□□□□□ -0.95
CTHRC1-203ENST00000520337 PLAURQ03405 335 aa9.11□□□□□ -0.95
CTHRC1-203ENST00000520337 ADGRE1Q14246 886 aa9.11□□□□□ -0.95
CTHRC1-203ENST00000520337 RASA3Q14644 834 aa9.11□□□□□ -0.95
CTHRC1-203ENST00000520337 GPR162Q16538 588 aa9.11□□□□□ -0.95
CTHRC1-203ENST00000520337 CERKLQ49MI3 558 aaPredicted RBP9.11□□□□□ -0.95
CTHRC1-203ENST00000520337 SIAH1Q8IUQ4 282 aa9.11□□□□□ -0.95
CTHRC1-203ENST00000520337 CRACR2BQ8N4Y2 399 aaPredicted RBP9.11□□□□□ -0.95
CTHRC1-203ENST00000520337 NUP133Q8WUM0 1156 aa9.11□□□□□ -0.95
CTHRC1-203ENST00000520337 FOXD4L4Q8WXT5 416 aaPredicted RBP9.11□□□□□ -0.95
CTHRC1-203ENST00000520337 CSRNP1Q96S65 589 aa9.11□□□□□ -0.95
CTHRC1-203ENST00000520337 MAP3K14Q99558 947 aa9.11□□□□□ -0.95
CTHRC1-203ENST00000520337 SAP130Q9H0E3 1048 aa9.11□□□□□ -0.95
CTHRC1-203ENST00000520337 MTMR4Q9NYA4 1195 aa9.11□□□□□ -0.95
CTHRC1-203ENST00000520337 ORC3Q9UBD5 711 aaPredicted RBP9.11□□□□□ -0.95
CTHRC1-203ENST00000520337 SCAF8Q9UPN6 1271 aaKnown RBP9.11□□□□□ -0.95
CTHRC1-203ENST00000520337 CCDC196A0A1B0GTZ2 297 aa9.1□□□□□ -0.95
CTHRC1-203ENST00000520337 UBE2Q2LH0YL09 131 aa9.1□□□□□ -0.95
CTHRC1-203ENST00000520337 CPLX1O14810 134 aa9.1□□□□□ -0.95
CTHRC1-203ENST00000520337 GRIN3BO60391 1043 aa9.1□□□□□ -0.95
CTHRC1-203ENST00000520337 TOP1P11387 765 aaKnown RBP9.1□□□□□ -0.95
CTHRC1-203ENST00000520337 PDIA4P13667 645 aaKnown RBP9.1□□□□□ -0.95
CTHRC1-203ENST00000520337 SELPP16109 830 aa9.1□□□□□ -0.95
CTHRC1-203ENST00000520337 GRM4Q14833 912 aa9.1□□□□□ -0.95
CTHRC1-203ENST00000520337 CLEC10AQ8IUN9 316 aa9.1□□□□□ -0.95
CTHRC1-203ENST00000520337 PHKBQ93100 1093 aa9.1□□□□□ -0.95
CTHRC1-203ENST00000520337 CHAMP1Q96JM3 812 aa9.1□□□□□ -0.95
CTHRC1-203ENST00000520337 KAT14Q9H8E8 782 aa9.1□□□□□ -0.95
CTHRC1-203ENST00000520337 TPSG1Q9NRR2 321 aa9.1□□□□□ -0.95
CTHRC1-203ENST00000520337 HERC5Q9UII4 1024 aaKnown RBP9.1□□□□□ -0.95
CTHRC1-203ENST00000520337 HACL1Q9UJ83 578 aa9.1□□□□□ -0.95
CTHRC1-203ENST00000520337 STX8Q9UNK0 236 aa9.1□□□□□ -0.95
CTHRC1-203ENST00000520337 USP20Q9Y2K6 914 aa9.1□□□□□ -0.95
CTHRC1-203ENST00000520337 STK36Q9NRP7 1315 aa9.09□□□□□ -0.95
CTHRC1-203ENST00000520337 SMCHD1A6NHR9 2005 aa9.09□□□□□ -0.95
CTHRC1-203ENST00000520337 CDKL5O76039 1030 aa9.09□□□□□ -0.95
CTHRC1-203ENST00000520337 PLEKHA8P1O95397 391 aa9.09□□□□□ -0.95
CTHRC1-203ENST00000520337 BAG4O95429 457 aaKnown RBP9.09□□□□□ -0.95
CTHRC1-203ENST00000520337 F13A1P00488 732 aa9.09□□□□□ -0.95
CTHRC1-203ENST00000520337 MCM4P33991 863 aa9.09□□□□□ -0.95
CTHRC1-203ENST00000520337 TNNI2P48788 182 aa9.09□□□□□ -0.95
CTHRC1-203ENST00000520337 MBTPS1Q14703 1052 aa9.09□□□□□ -0.95
CTHRC1-203ENST00000520337 SEPT2Q15019 361 aa9.09□□□□□ -0.95
CTHRC1-203ENST00000520337 RSPO4Q2I0M5 234 aaPredicted RBP9.09□□□□□ -0.95
CTHRC1-203ENST00000520337 ABCB5Q2M3G0 1257 aa9.09□□□□□ -0.95
CTHRC1-203ENST00000520337 SLC35G1Q2M3R5 365 aa9.09□□□□□ -0.95
CTHRC1-203ENST00000520337 NKAPLQ5M9Q1 402 aa9.09□□□□□ -0.95
CTHRC1-203ENST00000520337 CPLX2Q6PUV4 134 aaKnown RBP9.09□□□□□ -0.95
CTHRC1-203ENST00000520337 TMTC3Q6ZXV5 915 aa9.09□□□□□ -0.95
CTHRC1-203ENST00000520337 CDC37L1Q7L3B6 337 aa9.09□□□□□ -0.95
CTHRC1-203ENST00000520337 WFDC8Q8IUA0 241 aa9.09□□□□□ -0.95
CTHRC1-203ENST00000520337 KRTAP1-3Q8IUG1 177 aa9.09□□□□□ -0.95
CTHRC1-203ENST00000520337 DMRTC2Q8IXT2 367 aaPredicted RBP9.09□□□□□ -0.95
CTHRC1-203ENST00000520337 SRBD1Q8N5C6 995 aaKnown RBP9.09□□□□□ -0.95
CTHRC1-203ENST00000520337 FAM184AQ8NB25 1140 aa9.09□□□□□ -0.95
CTHRC1-203ENST00000520337 RGS22Q8NE09 1264 aa9.09□□□□□ -0.95
CTHRC1-203ENST00000520337 PIK3R5Q8WYR1 880 aa9.09□□□□□ -0.95
CTHRC1-203ENST00000520337 MKL1Q969V6 931 aa9.09□□□□□ -0.95
CTHRC1-203ENST00000520337 AIFM3Q96NN9 605 aa9.09□□□□□ -0.95
CTHRC1-203ENST00000520337 DEFB129Q9H1M3 183 aa9.09□□□□□ -0.95
CTHRC1-203ENST00000520337 SEMA6BQ9H3T3 888 aa9.09□□□□□ -0.95
CTHRC1-203ENST00000520337 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.09□□□□□ -0.95
CTHRC1-203ENST00000520337 RBM28Q9NW13 759 aaKnown RBP9.09□□□□□ -0.95
CTHRC1-203ENST00000520337 MAD2L2Q9UI95 211 aa9.09□□□□□ -0.95
CTHRC1-203ENST00000520337 PHIPQ8WWQ0 1821 aa9.09□□□□□ -0.95
CTHRC1-203ENST00000520337 DOCK1Q14185 1865 aa9.08□□□□□ -0.96
CTHRC1-203ENST00000520337 MPHOSPH10O00566 681 aaKnown RBP9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms