RNA–Protein interactions for RNA: ENST00000519599.1

IGKV3D-25-201, Transcript of immunoglobulin kappa variable 3D-25 (pseudogene), humanhuman

BASIC

Gene IGKV3D-25, Length 235 nt, Biotype IG V pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV3D-25-201ENST00000519599 RFXAPO00287 272 aa7.09□□□□□ -1.27
IGKV3D-25-201ENST00000519599 TREHO43280 583 aa7.09□□□□□ -1.27
IGKV3D-25-201ENST00000519599 PFKMP08237 780 aa7.09□□□□□ -1.27
IGKV3D-25-201ENST00000519599 HSPA4P34932 840 aa7.09□□□□□ -1.27
IGKV3D-25-201ENST00000519599 RFC2P35250 354 aa7.09□□□□□ -1.27
IGKV3D-25-201ENST00000519599 CLK2P49760 499 aaKnown RBP7.09□□□□□ -1.27
IGKV3D-25-201ENST00000519599 WDR5P61964 334 aaKnown RBP7.09□□□□□ -1.27
IGKV3D-25-201ENST00000519599 TAP1Q03518 808 aa7.09□□□□□ -1.27
IGKV3D-25-201ENST00000519599 SART3Q15020 963 aaKnown RBP7.09□□□□□ -1.27
IGKV3D-25-201ENST00000519599 NTRK3Q16288 839 aa7.09□□□□□ -1.27
IGKV3D-25-201ENST00000519599 ZNF618Q5T7W0 954 aa7.09□□□□□ -1.27
IGKV3D-25-201ENST00000519599 METTL7BQ6UX53 244 aa7.09□□□□□ -1.27
IGKV3D-25-201ENST00000519599 LRRC8DQ7L1W4 858 aa7.09□□□□□ -1.27
IGKV3D-25-201ENST00000519599 CYFIP1Q7L576 1253 aa7.09□□□□□ -1.27
IGKV3D-25-201ENST00000519599 SERINC5Q86VE9 423 aa7.09□□□□□ -1.27
IGKV3D-25-201ENST00000519599 MICU3Q86XE3 530 aa7.09□□□□□ -1.27
IGKV3D-25-201ENST00000519599 DHX37Q8IY37 1157 aaKnown RBP7.09□□□□□ -1.27
IGKV3D-25-201ENST00000519599 RPUSD2Q8IZ73 545 aaKnown RBP7.09□□□□□ -1.27
IGKV3D-25-201ENST00000519599 CTCFLQ8NI51 663 aaPredicted RBP7.09□□□□□ -1.27
IGKV3D-25-201ENST00000519599 CYP2W1Q8TAV3 490 aa7.09□□□□□ -1.27
IGKV3D-25-201ENST00000519599 CAGE1Q8TC20 777 aa7.09□□□□□ -1.27
IGKV3D-25-201ENST00000519599 AFAP1L1Q8TED9 768 aa7.09□□□□□ -1.27
IGKV3D-25-201ENST00000519599 SPATA33Q96N06 139 aa7.09□□□□□ -1.27
IGKV3D-25-201ENST00000519599 NEK1Q96PY6 1258 aa7.09□□□□□ -1.27
IGKV3D-25-201ENST00000519599 RNPEPQ9H4A4 650 aa7.09□□□□□ -1.27
IGKV3D-25-201ENST00000519599 PCDHA11Q9Y5I1 949 aa7.09□□□□□ -1.27
IGKV3D-25-201ENST00000519599 XIRP2A4UGR9 3374 aa7.09□□□□□ -1.27
IGKV3D-25-201ENST00000519599 H3BRB1 525 aa7.08□□□□□ -1.28
IGKV3D-25-201ENST00000519599 STXBP3O00186 592 aa7.08□□□□□ -1.28
IGKV3D-25-201ENST00000519599 FIBPO43427 364 aa7.08□□□□□ -1.28
IGKV3D-25-201ENST00000519599 CDC45O75419 566 aa7.08□□□□□ -1.28
IGKV3D-25-201ENST00000519599 LGR5O75473 907 aa7.08□□□□□ -1.28
IGKV3D-25-201ENST00000519599 STAM2O75886 525 aa7.08□□□□□ -1.28
IGKV3D-25-201ENST00000519599 CA3P07451 260 aa7.08□□□□□ -1.28
IGKV3D-25-201ENST00000519599 LINC00271P0C7V0 271 aa7.08□□□□□ -1.28
IGKV3D-25-201ENST00000519599 SMIM10L2AP0DMW4 78 aa7.08□□□□□ -1.28
IGKV3D-25-201ENST00000519599 SMIM10L2BP0DMW5 78 aa7.08□□□□□ -1.28
IGKV3D-25-201ENST00000519599 SELPP16109 830 aa7.08□□□□□ -1.28
IGKV3D-25-201ENST00000519599 ATP2A2P16615 1042 aaKnown RBP7.08□□□□□ -1.28
IGKV3D-25-201ENST00000519599 POU3F3P20264 500 aaPredicted RBP7.08□□□□□ -1.28
IGKV3D-25-201ENST00000519599 KIF5BP33176 963 aa7.08□□□□□ -1.28
IGKV3D-25-201ENST00000519599 MGAT3Q09327 533 aa7.08□□□□□ -1.28
IGKV3D-25-201ENST00000519599 PTK7Q13308 1070 aa7.08□□□□□ -1.28
IGKV3D-25-201ENST00000519599 RAB30Q15771 203 aa7.08□□□□□ -1.28
IGKV3D-25-201ENST00000519599 PKN1Q16512 942 aa7.08□□□□□ -1.28
IGKV3D-25-201ENST00000519599 BRDTQ58F21 947 aaPredicted RBP7.08□□□□□ -1.28
IGKV3D-25-201ENST00000519599 MARCH8Q5T0T0 291 aa7.08□□□□□ -1.28
IGKV3D-25-201ENST00000519599 KRT40Q6A162 431 aa7.08□□□□□ -1.28
IGKV3D-25-201ENST00000519599 KCNV1Q6PIU1 500 aa7.08□□□□□ -1.28
IGKV3D-25-201ENST00000519599 CASC1Q6TDU7 716 aa7.08□□□□□ -1.28
IGKV3D-25-201ENST00000519599 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.08□□□□□ -1.28
IGKV3D-25-201ENST00000519599 DHX32Q7L7V1 743 aaKnown RBP7.08□□□□□ -1.28
IGKV3D-25-201ENST00000519599 HERC6Q8IVU3 1022 aa7.08□□□□□ -1.28
IGKV3D-25-201ENST00000519599 TMTC2Q8N394 836 aa7.08□□□□□ -1.28
IGKV3D-25-201ENST00000519599 FBXL16Q8N461 479 aa7.08□□□□□ -1.28
IGKV3D-25-201ENST00000519599 CCDC82Q8N4S0 544 aa7.08□□□□□ -1.28
IGKV3D-25-201ENST00000519599 LMBR1Q8WVP7 490 aa7.08□□□□□ -1.28
IGKV3D-25-201ENST00000519599 ZBTB10Q96DT7 871 aa7.08□□□□□ -1.28
IGKV3D-25-201ENST00000519599 RRP36Q96EU6 259 aaKnown RBP7.08□□□□□ -1.28
IGKV3D-25-201ENST00000519599 PGBD1Q96JS3 809 aa7.08□□□□□ -1.28
IGKV3D-25-201ENST00000519599 SLC9A7Q96T83 725 aa7.08□□□□□ -1.28
IGKV3D-25-201ENST00000519599 SENP7Q9BQF6 1050 aa7.08□□□□□ -1.28
IGKV3D-25-201ENST00000519599 LZTS2Q9BRK4 669 aa7.08□□□□□ -1.28
IGKV3D-25-201ENST00000519599 TUT1Q9H6E5 874 aaKnown RBP7.08□□□□□ -1.28
IGKV3D-25-201ENST00000519599 PCDHA6Q9UN73 950 aa7.08□□□□□ -1.28
IGKV3D-25-201ENST00000519599 PCDHA8Q9Y5H6 950 aa7.08□□□□□ -1.28
IGKV3D-25-201ENST00000519599 SNX14Q9Y5W7 946 aa7.08□□□□□ -1.28
IGKV3D-25-201ENST00000519599 SLC4A7Q9Y6M7 1214 aa7.08□□□□□ -1.28
IGKV3D-25-201ENST00000519599 NCOR1O75376 2440 aa7.07□□□□□ -1.28
IGKV3D-25-201ENST00000519599 IGLV3-22A0A075B6J6 115 aa7.07□□□□□ -1.28
IGKV3D-25-201ENST00000519599 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.07□□□□□ -1.28
IGKV3D-25-201ENST00000519599 CCDC69A6NI79 296 aa7.07□□□□□ -1.28
IGKV3D-25-201ENST00000519599 BAIAP3O94812 1187 aa7.07□□□□□ -1.28
IGKV3D-25-201ENST00000519599 CALM1P0DP23 149 aa7.07□□□□□ -1.28
IGKV3D-25-201ENST00000519599 CALM2P0DP24 149 aa7.07□□□□□ -1.28
IGKV3D-25-201ENST00000519599 CALM3P0DP25 149 aa7.07□□□□□ -1.28
IGKV3D-25-201ENST00000519599 ARP10275 920 aa7.07□□□□□ -1.28
IGKV3D-25-201ENST00000519599 ADD1P35611 737 aaKnown RBP7.07□□□□□ -1.28
IGKV3D-25-201ENST00000519599 GNAQP50148 359 aa7.07□□□□□ -1.28
IGKV3D-25-201ENST00000519599 EVCP57679 992 aa7.07□□□□□ -1.28
IGKV3D-25-201ENST00000519599 CHMP4BP1P59074 171 aa7.07□□□□□ -1.28
IGKV3D-25-201ENST00000519599 ITGB3BPQ13352 177 aaPredicted RBP7.07□□□□□ -1.28
IGKV3D-25-201ENST00000519599 BFSP2Q13515 415 aa7.07□□□□□ -1.28
IGKV3D-25-201ENST00000519599 PLEKHG4Q58EX7 1191 aa7.07□□□□□ -1.28
IGKV3D-25-201ENST00000519599 FAM26DQ5JW98 314 aa7.07□□□□□ -1.28
IGKV3D-25-201ENST00000519599 CNKSR3Q6P9H4 555 aa7.07□□□□□ -1.28
IGKV3D-25-201ENST00000519599 C7orf31Q8N865 590 aa7.07□□□□□ -1.28
IGKV3D-25-201ENST00000519599 PHOSPHO2Q8TCD6 241 aa7.07□□□□□ -1.28
IGKV3D-25-201ENST00000519599 GPRASP2Q96D09 838 aa7.07□□□□□ -1.28
IGKV3D-25-201ENST00000519599 KATNAL1Q9BW62 490 aa7.07□□□□□ -1.28
IGKV3D-25-201ENST00000519599 PSTPIP2Q9H939 334 aa7.07□□□□□ -1.28
IGKV3D-25-201ENST00000519599 RIC8AQ9NPQ8 531 aa7.07□□□□□ -1.28
IGKV3D-25-201ENST00000519599 JADE2Q9NQC1 790 aa7.07□□□□□ -1.28
IGKV3D-25-201ENST00000519599 SETD4Q9NVD3 440 aa7.07□□□□□ -1.28
IGKV3D-25-201ENST00000519599 TMEM260Q9NX78 707 aa7.07□□□□□ -1.28
IGKV3D-25-201ENST00000519599 SLC12A7Q9Y666 1083 aa7.07□□□□□ -1.28
IGKV3D-25-201ENST00000519599 MTCH2Q9Y6C9 303 aa7.07□□□□□ -1.28
IGKV3D-25-201ENST00000519599 TTC28Q96AY4 2481 aa7.07□□□□□ -1.28
IGKV3D-25-201ENST00000519599 IGKV6D-21A0A0A0MT36 114 aa7.06□□□□□ -1.28
IGKV3D-25-201ENST00000519599 KLF18A0A0U1RQI7 1052 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms