RNA–Protein interactions for RNA: ENST00000519577.5

RUNX1T1-220, Transcript of RUNX1 translocation partner 1, humanhuman

TSL 4

Gene RUNX1T1, Length 586 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1T1-220ENST00000519577 ICAM3P32942 547 aa17.31■□□□□ 0.36
RUNX1T1-220ENST00000519577 GNAQP50148 359 aa17.31■□□□□ 0.36
RUNX1T1-220ENST00000519577 SP4Q02446 784 aa17.31■□□□□ 0.36
RUNX1T1-220ENST00000519577 KRT40Q6A162 431 aa17.31■□□□□ 0.36
RUNX1T1-220ENST00000519577 METTL7BQ6UX53 244 aa17.31■□□□□ 0.36
RUNX1T1-220ENST00000519577 CYFIP1Q7L576 1253 aa17.31■□□□□ 0.36
RUNX1T1-220ENST00000519577 ATXN2LQ8WWM7 1075 aaKnown RBP17.31■□□□□ 0.36
RUNX1T1-220ENST00000519577 LZTS2Q9BRK4 669 aa17.31■□□□□ 0.36
RUNX1T1-220ENST00000519577 MTA3Q9BTC8 594 aa17.31■□□□□ 0.36
RUNX1T1-220ENST00000519577 TUT1Q9H6E5 874 aaKnown RBP17.31■□□□□ 0.36
RUNX1T1-220ENST00000519577 ANO2Q9NQ90 1003 aa17.31■□□□□ 0.36
RUNX1T1-220ENST00000519577 TELO2Q9Y4R8 837 aa17.31■□□□□ 0.36
RUNX1T1-220ENST00000519577 COL4A4P53420 1690 aaPredicted RBP17.31■□□□□ 0.36
RUNX1T1-220ENST00000519577 MICAL3Q7RTP6 2002 aa17.3■□□□□ 0.36
RUNX1T1-220ENST00000519577 KAT6AQ92794 2004 aa17.3■□□□□ 0.36
RUNX1T1-220ENST00000519577 hCG_1642624A0A1W2PR95 340 aa17.3■□□□□ 0.36
RUNX1T1-220ENST00000519577 SPATA31C2B4DYI2 1134 aa17.3■□□□□ 0.36
RUNX1T1-220ENST00000519577 MEIS2O14770 477 aa17.3■□□□□ 0.36
RUNX1T1-220ENST00000519577 SMIM10L2AP0DMW4 78 aa17.3■□□□□ 0.36
RUNX1T1-220ENST00000519577 SMIM10L2BP0DMW5 78 aa17.3■□□□□ 0.36
RUNX1T1-220ENST00000519577 SMARCA1P28370 1054 aa17.3■□□□□ 0.36
RUNX1T1-220ENST00000519577 THPOP40225 353 aa17.3■□□□□ 0.36
RUNX1T1-220ENST00000519577 NEDD9Q14511 834 aa17.3■□□□□ 0.36
RUNX1T1-220ENST00000519577 UTP14CQ5TAP6 766 aaKnown RBP17.3■□□□□ 0.36
RUNX1T1-220ENST00000519577 SERINC5Q86VE9 423 aa17.3■□□□□ 0.36
RUNX1T1-220ENST00000519577 TRIM50Q86XT4 487 aa17.3■□□□□ 0.36
RUNX1T1-220ENST00000519577 ATP6V0A1Q93050 837 aa17.3■□□□□ 0.36
RUNX1T1-220ENST00000519577 ZBED2Q9BTP6 218 aa17.3■□□□□ 0.36
RUNX1T1-220ENST00000519577 TCF20Q9UGU0 1960 aaKnown RBP17.29■□□□□ 0.36
RUNX1T1-220ENST00000519577 ABHD14A-ACY1A0A1B0GW23 586 aa17.29■□□□□ 0.36
RUNX1T1-220ENST00000519577 PIK3CDO00329 1044 aa17.29■□□□□ 0.36
RUNX1T1-220ENST00000519577 TREHO43280 583 aa17.29■□□□□ 0.36
RUNX1T1-220ENST00000519577 GTPBP6O43824 516 aaPredicted RBP17.29■□□□□ 0.36
RUNX1T1-220ENST00000519577 MRPS5P82675 430 aaKnown RBP17.29■□□□□ 0.36
RUNX1T1-220ENST00000519577 NECTIN1Q15223 517 aa17.29■□□□□ 0.36
RUNX1T1-220ENST00000519577 SKIV2LQ15477 1246 aaKnown RBP17.29■□□□□ 0.36
RUNX1T1-220ENST00000519577 PCNX4Q63HM2 1172 aa17.29■□□□□ 0.36
RUNX1T1-220ENST00000519577 FAM117BQ6P1L5 589 aa17.29■□□□□ 0.36
RUNX1T1-220ENST00000519577 TMTC2Q8N394 836 aa17.29■□□□□ 0.36
RUNX1T1-220ENST00000519577 CCDC82Q8N4S0 544 aa17.29■□□□□ 0.36
RUNX1T1-220ENST00000519577 ASB2Q96Q27 587 aa17.29■□□□□ 0.36
RUNX1T1-220ENST00000519577 GPR20Q99678 358 aa17.29■□□□□ 0.36
RUNX1T1-220ENST00000519577 SLC12A7Q9Y666 1083 aa17.29■□□□□ 0.36
RUNX1T1-220ENST00000519577 MTCH2Q9Y6C9 303 aa17.29■□□□□ 0.36
RUNX1T1-220ENST00000519577 TRANK1O15050 2925 aa17.28■□□□□ 0.36
RUNX1T1-220ENST00000519577 RSPH10B2B2RC85 870 aa17.28■□□□□ 0.36
RUNX1T1-220ENST00000519577 LGR5O75473 907 aa17.28■□□□□ 0.36
RUNX1T1-220ENST00000519577 RSPH10BP0C881 870 aa17.28■□□□□ 0.36
RUNX1T1-220ENST00000519577 CALM1P0DP23 149 aa17.28■□□□□ 0.36
RUNX1T1-220ENST00000519577 CALM2P0DP24 149 aa17.28■□□□□ 0.36
RUNX1T1-220ENST00000519577 CALM3P0DP25 149 aa17.28■□□□□ 0.36
RUNX1T1-220ENST00000519577 LIFRP42702 1097 aa17.28■□□□□ 0.36
RUNX1T1-220ENST00000519577 IKBKEQ14164 716 aa17.28■□□□□ 0.36
RUNX1T1-220ENST00000519577 UBE2SQ16763 222 aa17.28■□□□□ 0.36
RUNX1T1-220ENST00000519577 MICU3Q86XE3 530 aa17.28■□□□□ 0.36
RUNX1T1-220ENST00000519577 USP26Q9BXU7 913 aa17.28■□□□□ 0.36
RUNX1T1-220ENST00000519577 TSPYL2Q9H2G4 693 aaPredicted RBP17.28■□□□□ 0.36
RUNX1T1-220ENST00000519577 RNPEPQ9H4A4 650 aa17.28■□□□□ 0.36
RUNX1T1-220ENST00000519577 PSTPIP2Q9H939 334 aa17.28■□□□□ 0.36
RUNX1T1-220ENST00000519577 BRWD1Q9NSI6 2320 aa17.27■□□□□ 0.36
RUNX1T1-220ENST00000519577 GJB5O95377 273 aa17.27■□□□□ 0.36
RUNX1T1-220ENST00000519577 CTSHP09668 335 aa17.27■□□□□ 0.36
RUNX1T1-220ENST00000519577 HOXC8P31273 242 aa17.27■□□□□ 0.36
RUNX1T1-220ENST00000519577 GRB10Q13322 594 aa17.27■□□□□ 0.36
RUNX1T1-220ENST00000519577 XRRA1Q6P2D8 792 aa17.27■□□□□ 0.36
RUNX1T1-220ENST00000519577 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.27■□□□□ 0.36
RUNX1T1-220ENST00000519577 TMTC3Q6ZXV5 915 aa17.27■□□□□ 0.36
RUNX1T1-220ENST00000519577 NLRX1Q86UT6 975 aa17.27■□□□□ 0.36
RUNX1T1-220ENST00000519577 IL27Q8NEV9 243 aa17.27■□□□□ 0.36
RUNX1T1-220ENST00000519577 DBF4BQ8NFT6 615 aa17.27■□□□□ 0.36
RUNX1T1-220ENST00000519577 ADAMTS19Q8TE59 1207 aa17.27■□□□□ 0.36
RUNX1T1-220ENST00000519577 SETD4Q9NVD3 440 aa17.27■□□□□ 0.36
RUNX1T1-220ENST00000519577 EMSYQ7Z589 1322 aa17.26■□□□□ 0.35
RUNX1T1-220ENST00000519577 REV3LO60673 3130 aa17.26■□□□□ 0.35
RUNX1T1-220ENST00000519577 TNFRSF10AO00220 468 aa17.26■□□□□ 0.35
RUNX1T1-220ENST00000519577 EFCAB14O75071 495 aa17.26■□□□□ 0.35
RUNX1T1-220ENST00000519577 POU3F3P20264 500 aaPredicted RBP17.26■□□□□ 0.35
RUNX1T1-220ENST00000519577 TFF2Q03403 129 aa17.26■□□□□ 0.35
RUNX1T1-220ENST00000519577 BMP2KLQ5H9B9 411 aa17.26■□□□□ 0.35
RUNX1T1-220ENST00000519577 HEATR3Q7Z4Q2 680 aa17.26■□□□□ 0.35
RUNX1T1-220ENST00000519577 FANCBQ8NB91 859 aa17.26■□□□□ 0.35
RUNX1T1-220ENST00000519577 GDPD5Q8WTR4 605 aa17.26■□□□□ 0.35
RUNX1T1-220ENST00000519577 TCEANC2Q96MN5 208 aa17.26■□□□□ 0.35
RUNX1T1-220ENST00000519577 PKD2L1Q9P0L9 805 aa17.26■□□□□ 0.35
RUNX1T1-220ENST00000519577 ZNF215Q9UL58 517 aaPredicted RBP17.26■□□□□ 0.35
RUNX1T1-220ENST00000519577 MTUS1Q9ULD2 1270 aa17.26■□□□□ 0.35
RUNX1T1-220ENST00000519577 LPXNO60711 386 aa17.25■□□□□ 0.35
RUNX1T1-220ENST00000519577 ATP9AO75110 1047 aa17.25■□□□□ 0.35
RUNX1T1-220ENST00000519577 ARHGAP4P98171 946 aa17.25■□□□□ 0.35
RUNX1T1-220ENST00000519577 SGMS1Q86VZ5 419 aa17.25■□□□□ 0.35
RUNX1T1-220ENST00000519577 RAD9AQ99638 391 aa17.25■□□□□ 0.35
RUNX1T1-220ENST00000519577 SENP7Q9BQF6 1050 aa17.25■□□□□ 0.35
RUNX1T1-220ENST00000519577 OSBPL7Q9BZF2 842 aa17.25■□□□□ 0.35
RUNX1T1-220ENST00000519577 SIP14410 1827 aa17.25■□□□□ 0.35
RUNX1T1-220ENST00000519577 CNTNAP5Q8WYK1 1306 aa17.24■□□□□ 0.35
RUNX1T1-220ENST00000519577 SPDYE3A6NKU9 549 aa17.24■□□□□ 0.35
RUNX1T1-220ENST00000519577 AMHP03971 560 aa17.24■□□□□ 0.35
RUNX1T1-220ENST00000519577 GNAT1P11488 350 aa17.24■□□□□ 0.35
RUNX1T1-220ENST00000519577 KCNA2P16389 499 aa17.24■□□□□ 0.35
RUNX1T1-220ENST00000519577 ITGB5P18084 799 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms