RNA–Protein interactions for RNA: ENST00000519553.1

PTPN12-213, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-213ENST00000519553 CD244Q9BZW8 370 aa8.87□□□□□ -0.99
PTPN12-213ENST00000519553 SAMD15Q9P1V8 674 aa8.87□□□□□ -0.99
PTPN12-213ENST00000519553 SRPK3Q9UPE1 567 aa8.87□□□□□ -0.99
PTPN12-213ENST00000519553 GSG1L2A8MUP6 293 aa8.86□□□□□ -0.99
PTPN12-213ENST00000519553 ETV2O00321 342 aaPredicted RBP8.86□□□□□ -0.99
PTPN12-213ENST00000519553 N4BP3O15049 544 aa8.86□□□□□ -0.99
PTPN12-213ENST00000519553 FARP2O94887 1054 aaPredicted RBP8.86□□□□□ -0.99
PTPN12-213ENST00000519553 MED14OSP0DP75 135 aa8.86□□□□□ -0.99
PTPN12-213ENST00000519553 GLDCP23378 1020 aa8.86□□□□□ -0.99
PTPN12-213ENST00000519553 IGFBP6P24592 240 aaPredicted RBP8.86□□□□□ -0.99
PTPN12-213ENST00000519553 MC3RP41968 323 aa8.86□□□□□ -0.99
PTPN12-213ENST00000519553 DLG4P78352 724 aa8.86□□□□□ -0.99
PTPN12-213ENST00000519553 PIK3R6Q5UE93 754 aa8.86□□□□□ -0.99
PTPN12-213ENST00000519553 TMEM132EQ6IEE7 984 aa8.86□□□□□ -0.99
PTPN12-213ENST00000519553 FSTL4Q6MZW2 842 aa8.86□□□□□ -0.99
PTPN12-213ENST00000519553 SYDE1Q6ZW31 735 aaPredicted RBP8.86□□□□□ -0.99
PTPN12-213ENST00000519553 KCTD1Q719H9 257 aa8.86□□□□□ -0.99
PTPN12-213ENST00000519553 DDX53Q86TM3 631 aaKnown RBP8.86□□□□□ -0.99
PTPN12-213ENST00000519553 PTRH1Q86Y79 214 aaKnown RBP8.86□□□□□ -0.99
PTPN12-213ENST00000519553 PANK1Q8TE04 598 aa8.86□□□□□ -0.99
PTPN12-213ENST00000519553 MZB1Q8WU39 189 aa8.86□□□□□ -0.99
PTPN12-213ENST00000519553 CLEC4DQ8WXI8 215 aa8.86□□□□□ -0.99
PTPN12-213ENST00000519553 DDX1Q92499 740 aaKnown RBP8.86□□□□□ -0.99
PTPN12-213ENST00000519553 PDGFDQ9GZP0 370 aaPredicted RBP8.86□□□□□ -0.99
PTPN12-213ENST00000519553 RNF38Q9H0F5 515 aa8.86□□□□□ -0.99
PTPN12-213ENST00000519553 SLKQ9H2G2 1235 aaPredicted RBP8.86□□□□□ -0.99
PTPN12-213ENST00000519553 M0R2C6 588 aa8.85□□□□□ -0.99
PTPN12-213ENST00000519553 KRT15P19012 456 aa8.85□□□□□ -0.99
PTPN12-213ENST00000519553 TUSC3Q13454 348 aa8.85□□□□□ -0.99
PTPN12-213ENST00000519553 FIGNQ5HY92 759 aa8.85□□□□□ -0.99
PTPN12-213ENST00000519553 ZNF648Q5T619 568 aaPredicted RBP8.85□□□□□ -0.99
PTPN12-213ENST00000519553 CDCA2Q69YH5 1023 aaPredicted RBP8.85□□□□□ -0.99
PTPN12-213ENST00000519553 CNNM4Q6P4Q7 775 aa8.85□□□□□ -0.99
PTPN12-213ENST00000519553 HHIPL2Q6UWX4 724 aa8.85□□□□□ -0.99
PTPN12-213ENST00000519553 ETV3LQ6ZN32 361 aa8.85□□□□□ -0.99
PTPN12-213ENST00000519553 THNSL2Q86YJ6 484 aa8.85□□□□□ -0.99
PTPN12-213ENST00000519553 FAM126BQ8IXS8 530 aa8.85□□□□□ -0.99
PTPN12-213ENST00000519553 TTLL11Q8NHH1 800 aa8.85□□□□□ -0.99
PTPN12-213ENST00000519553 CPA5Q8WXQ8 436 aa8.85□□□□□ -0.99
PTPN12-213ENST00000519553 MTFR1LQ9H019 292 aa8.85□□□□□ -0.99
PTPN12-213ENST00000519553 TRAF5O00463 557 aa8.84□□□□□ -0.99
PTPN12-213ENST00000519553 KCNK3O14649 394 aa8.84□□□□□ -0.99
PTPN12-213ENST00000519553 CLSTN1O94985 981 aa8.84□□□□□ -0.99
PTPN12-213ENST00000519553 ATF2P15336 505 aa8.84□□□□□ -0.99
PTPN12-213ENST00000519553 TAF7LQ5H9L4 462 aa8.84□□□□□ -0.99
PTPN12-213ENST00000519553 ZNF662Q6ZS27 426 aa8.84□□□□□ -0.99
PTPN12-213ENST00000519553 NOSTRINQ8IVI9 506 aa8.84□□□□□ -0.99
PTPN12-213ENST00000519553 ORAI3Q9BRQ5 295 aa8.84□□□□□ -0.99
PTPN12-213ENST00000519553 DTLQ9NZJ0 730 aa8.84□□□□□ -0.99
PTPN12-213ENST00000519553 SBNO2Q9Y2G9 1366 aa8.84□□□□□ -0.99
PTPN12-213ENST00000519553 CBX4O00257 560 aa8.83□□□□□ -1
PTPN12-213ENST00000519553 PDE8AO60658 829 aa8.83□□□□□ -1
PTPN12-213ENST00000519553 KPNA6O60684 536 aa8.83□□□□□ -1
PTPN12-213ENST00000519553 C8BP07358 591 aa8.83□□□□□ -1
PTPN12-213ENST00000519553 MYCLP1P12525 358 aaPredicted RBP8.83□□□□□ -1
PTPN12-213ENST00000519553 NCAM1P13591 858 aa8.83□□□□□ -1
PTPN12-213ENST00000519553 FLT3P36888 993 aa8.83□□□□□ -1
PTPN12-213ENST00000519553 MASP1P48740 699 aa8.83□□□□□ -1
PTPN12-213ENST00000519553 CFAP100Q494V2 611 aa8.83□□□□□ -1
PTPN12-213ENST00000519553 OTOP1Q7RTM1 612 aa8.83□□□□□ -1
PTPN12-213ENST00000519553 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.83□□□□□ -1
PTPN12-213ENST00000519553 ANKLE2Q86XL3 938 aa8.83□□□□□ -1
PTPN12-213ENST00000519553 CHST14Q8NCH0 376 aa8.83□□□□□ -1
PTPN12-213ENST00000519553 KCNN1Q92952 543 aa8.83□□□□□ -1
PTPN12-213ENST00000519553 YBX3P16989 372 aaKnown RBP eCLIP8.82□□□□□ -17e-7■■■■□ 21.8
PTPN12-213ENST00000519553 STAT5AP42229 794 aa8.82□□□□□ -1
PTPN12-213ENST00000519553 CACNB2Q08289 660 aaPredicted RBP8.82□□□□□ -1
PTPN12-213ENST00000519553 PCBP1Q15365 356 aaKnown RBP eCLIP8.82□□□□□ -1
PTPN12-213ENST00000519553 TARBP2Q15633 366 aaKnown RBP8.82□□□□□ -1
PTPN12-213ENST00000519553 SEPT7Q16181 437 aaKnown RBP8.82□□□□□ -1
PTPN12-213ENST00000519553 CR1LQ2VPA4 569 aa8.82□□□□□ -1
PTPN12-213ENST00000519553 PKN3Q6P5Z2 889 aa8.82□□□□□ -1
PTPN12-213ENST00000519553 UBE2R2Q712K3 238 aaPredicted RBP8.82□□□□□ -1
PTPN12-213ENST00000519553 RNF180Q86T96 592 aa8.82□□□□□ -1
PTPN12-213ENST00000519553 TRIM48Q8IWZ4 208 aa8.82□□□□□ -1
PTPN12-213ENST00000519553 PPM1KQ8N3J5 372 aa8.82□□□□□ -1
PTPN12-213ENST00000519553 FAM26EQ8N5C1 309 aa8.82□□□□□ -1
PTPN12-213ENST00000519553 WNK4Q96J92 1243 aa8.82□□□□□ -1
PTPN12-213ENST00000519553 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.82□□□□□ -1
PTPN12-213ENST00000519553 NUB1Q9Y5A7 615 aa8.82□□□□□ -1
PTPN12-213ENST00000519553 BUB1BO60566 1050 aaPredicted RBP8.81□□□□□ -1
PTPN12-213ENST00000519553 TSPAN15O95858 294 aa8.81□□□□□ -1
PTPN12-213ENST00000519553 LRG1P02750 347 aa8.81□□□□□ -1
PTPN12-213ENST00000519553 GRIN1Q05586 938 aa8.81□□□□□ -1
PTPN12-213ENST00000519553 NLGN4XQ8N0W4 816 aa8.81□□□□□ -1
PTPN12-213ENST00000519553 BHLHE22Q8NFJ8 381 aaPredicted RBP8.81□□□□□ -1
PTPN12-213ENST00000519553 CD320Q9NPF0 282 aa8.81□□□□□ -1
PTPN12-213ENST00000519553 PRKAB1Q9Y478 270 aa8.81□□□□□ -1
PTPN12-213ENST00000519553 FAM90A27PA6NNH2 459 aa8.8□□□□□ -1
PTPN12-213ENST00000519553 ACOT7O00154 380 aa8.8□□□□□ -1
PTPN12-213ENST00000519553 C1QTNF9P0C862 333 aa8.8□□□□□ -1
PTPN12-213ENST00000519553 PFKLP17858 780 aa8.8□□□□□ -1
PTPN12-213ENST00000519553 STAT3P40763 770 aa8.8□□□□□ -1
PTPN12-213ENST00000519553 NEK4P51957 841 aa8.8□□□□□ -1
PTPN12-213ENST00000519553 SEC23AQ15436 765 aa8.8□□□□□ -1
PTPN12-213ENST00000519553 CPZQ66K79 652 aa8.8□□□□□ -1
PTPN12-213ENST00000519553 TEPPQ6URK8 271 aa8.8□□□□□ -1
PTPN12-213ENST00000519553 ATG14Q6ZNE5 492 aa8.8□□□□□ -1
PTPN12-213ENST00000519553 B3GNT8Q7Z7M8 397 aa8.8□□□□□ -1
PTPN12-213ENST00000519553 TMEFF1Q8IYR6 380 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms