RNA–Protein interactions for RNA: ENST00000518951.6

TOP1MT-206, Transcript of DNA topoisomerase I mitochondrial, humanhuman

TSL 5

Gene TOP1MT, Length 1,461 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1MT-206ENST00000518951 SLC5A5Q92911 643 aa23.77■■□□□ 1.4
TOP1MT-206ENST00000518951 XPNPEP3Q9NQH7 507 aa23.77■■□□□ 1.4
TOP1MT-206ENST00000518951 Q9Y3F1 56 aa23.77■■□□□ 1.4
TOP1MT-206ENST00000518951 ADAMTS4O75173 837 aa23.76■■□□□ 1.39
TOP1MT-206ENST00000518951 FARP2O94887 1054 aaPredicted RBP23.76■■□□□ 1.39
TOP1MT-206ENST00000518951 GJA9P57773 515 aa23.76■■□□□ 1.39
TOP1MT-206ENST00000518951 NEDD9Q14511 834 aa23.76■■□□□ 1.39
TOP1MT-206ENST00000518951 ABHD8Q96I13 439 aa23.76■■□□□ 1.39
TOP1MT-206ENST00000518951 FTOQ9C0B1 505 aaKnown RBP eCLIP23.76■■□□□ 1.39
TOP1MT-206ENST00000518951 UPF3AQ9H1J1 476 aaKnown RBP23.76■■□□□ 1.39
TOP1MT-206ENST00000518951 NFASCO94856 1347 aa23.76■■□□□ 1.39
TOP1MT-206ENST00000518951 NEMFO60524 1076 aa23.75■■□□□ 1.39
TOP1MT-206ENST00000518951 SGPL1O95470 568 aa23.75■■□□□ 1.39
TOP1MT-206ENST00000518951 FOXD4L6Q3SYB3 417 aaPredicted RBP23.75■■□□□ 1.39
TOP1MT-206ENST00000518951 FOXD4L3Q6VB84 417 aaPredicted RBP23.75■■□□□ 1.39
TOP1MT-206ENST00000518951 U2AF1L4Q8WU68 220 aaKnown RBP23.75■■□□□ 1.39
TOP1MT-206ENST00000518951 MTMR9Q96QG7 549 aa23.75■■□□□ 1.39
TOP1MT-206ENST00000518951 CRISPLD2Q9H0B8 497 aa23.75■■□□□ 1.39
TOP1MT-206ENST00000518951 MLXIPQ9HAP2 919 aa23.75■■□□□ 1.39
TOP1MT-206ENST00000518951 DDX39AO00148 427 aaKnown RBP23.75■■□□□ 1.39
TOP1MT-206ENST00000518951 PSMD10O75832 226 aa23.75■■□□□ 1.39
TOP1MT-206ENST00000518951 BEX3Q00994 111 aa23.75■■□□□ 1.39
TOP1MT-206ENST00000518951 LAMC2Q13753 1193 aa23.75■■□□□ 1.39
TOP1MT-206ENST00000518951 HSDL1Q3SXM5 330 aa23.75■■□□□ 1.39
TOP1MT-206ENST00000518951 METTL7BQ6UX53 244 aa23.75■■□□□ 1.39
TOP1MT-206ENST00000518951 AFG1LQ8WV93 481 aa23.75■■□□□ 1.39
TOP1MT-206ENST00000518951 EMID1Q96A84 441 aaPredicted RBP23.75■■□□□ 1.39
TOP1MT-206ENST00000518951 AP5M1Q9H0R1 490 aa23.75■■□□□ 1.39
TOP1MT-206ENST00000518951 OGDHLQ9ULD0 1010 aa23.75■■□□□ 1.39
TOP1MT-206ENST00000518951 CLIC4Q9Y696 253 aa23.75■■□□□ 1.39
TOP1MT-206ENST00000518951 TCHHQ07283 1943 aa23.74■■□□□ 1.39
TOP1MT-206ENST00000518951 WDR81Q562E7 1941 aa23.74■■□□□ 1.39
TOP1MT-206ENST00000518951 C6orf222P0C671 652 aaPredicted RBP23.74■■□□□ 1.39
TOP1MT-206ENST00000518951 GJA8P48165 433 aa23.74■■□□□ 1.39
TOP1MT-206ENST00000518951 NKX3-2P78367 333 aa23.74■■□□□ 1.39
TOP1MT-206ENST00000518951 PTGDRQ13258 359 aa23.74■■□□□ 1.39
TOP1MT-206ENST00000518951 ORC2Q13416 577 aaPredicted RBP23.74■■□□□ 1.39
TOP1MT-206ENST00000518951 CALCRLQ16602 461 aa23.74■■□□□ 1.39
TOP1MT-206ENST00000518951 TNS4Q8IZW8 715 aa23.74■■□□□ 1.39
TOP1MT-206ENST00000518951 GIMAP8Q8ND71 665 aaPredicted RBP23.74■■□□□ 1.39
TOP1MT-206ENST00000518951 KLHDC9Q8NEP7 349 aa23.74■■□□□ 1.39
TOP1MT-206ENST00000518951 CHAMP1Q96JM3 812 aa23.74■■□□□ 1.39
TOP1MT-206ENST00000518951 USP28Q96RU2 1077 aa23.74■■□□□ 1.39
TOP1MT-206ENST00000518951 TMEM106CQ9BVX2 250 aa23.74■■□□□ 1.39
TOP1MT-206ENST00000518951 TBX3O15119 743 aa23.73■■□□□ 1.39
TOP1MT-206ENST00000518951 CCNE2O96020 404 aa23.73■■□□□ 1.39
TOP1MT-206ENST00000518951 NUCB2P80303 420 aa23.73■■□□□ 1.39
TOP1MT-206ENST00000518951 SP4Q02446 784 aa23.73■■□□□ 1.39
TOP1MT-206ENST00000518951 LRRC41Q15345 812 aa23.73■■□□□ 1.39
TOP1MT-206ENST00000518951 SF3A1Q15459 793 aaKnown RBP23.73■■□□□ 1.39
TOP1MT-206ENST00000518951 LRCH2Q5VUJ6 765 aa23.73■■□□□ 1.39
TOP1MT-206ENST00000518951 FAM20AQ96MK3 541 aa23.73■■□□□ 1.39
TOP1MT-206ENST00000518951 SPATA33Q96N06 139 aa23.73■■□□□ 1.39
TOP1MT-206ENST00000518951 RIT2Q99578 217 aa23.73■■□□□ 1.39
TOP1MT-206ENST00000518951 SDF4Q9BRK5 362 aa23.73■■□□□ 1.39
TOP1MT-206ENST00000518951 TBC1D22BQ9NU19 505 aa23.73■■□□□ 1.39
TOP1MT-206ENST00000518951 SLC9A2Q9UBY0 812 aa23.73■■□□□ 1.39
TOP1MT-206ENST00000518951 A6NJR5 290 aa23.72■■□□□ 1.39
TOP1MT-206ENST00000518951 FSCN1Q16658 493 aaKnown RBP23.72■■□□□ 1.39
TOP1MT-206ENST00000518951 CCSAPQ6IQ19 270 aaPredicted RBP23.72■■□□□ 1.39
TOP1MT-206ENST00000518951 JPH1Q9HDC5 661 aaPredicted RBP23.72■■□□□ 1.39
TOP1MT-206ENST00000518951 TFIP11Q9UBB9 837 aaKnown RBP23.72■■□□□ 1.39
TOP1MT-206ENST00000518951 GSTTP1A0A1W2PQM5 241 aa23.71■■□□□ 1.39
TOP1MT-206ENST00000518951 GAS7O60861 476 aa23.71■■□□□ 1.39
TOP1MT-206ENST00000518951 TFRCP02786 760 aaKnown RBP23.71■■□□□ 1.39
TOP1MT-206ENST00000518951 MYCNP04198 464 aaPredicted RBP23.71■■□□□ 1.39
TOP1MT-206ENST00000518951 TXKP42681 527 aa23.71■■□□□ 1.39
TOP1MT-206ENST00000518951 CEBPZQ03701 1054 aaKnown RBP23.71■■□□□ 1.39
TOP1MT-206ENST00000518951 B3GNT9Q6UX72 402 aa23.71■■□□□ 1.39
TOP1MT-206ENST00000518951 GPR20Q99678 358 aa23.71■■□□□ 1.39
TOP1MT-206ENST00000518951 VAV3Q9UKW4 847 aa23.71■■□□□ 1.39
TOP1MT-206ENST00000518951 CIZ1Q9ULV3 898 aaPredicted RBP23.71■■□□□ 1.39
TOP1MT-206ENST00000518951 MARCH6O60337 910 aa23.7■■□□□ 1.38
TOP1MT-206ENST00000518951 BAG4O95429 457 aaKnown RBP23.7■■□□□ 1.38
TOP1MT-206ENST00000518951 MMP3P08254 477 aa23.7■■□□□ 1.38
TOP1MT-206ENST00000518951 OR52Z1P0C646 297 aa23.7■■□□□ 1.38
TOP1MT-206ENST00000518951 MNX1P50219 401 aaPredicted RBP23.7■■□□□ 1.38
TOP1MT-206ENST00000518951 PTPAQ15257 358 aa23.7■■□□□ 1.38
TOP1MT-206ENST00000518951 GNASQ5JWF2 1037 aa23.7■■□□□ 1.38
TOP1MT-206ENST00000518951 PPTC7Q8NI37 304 aa23.7■■□□□ 1.38
TOP1MT-206ENST00000518951 TEKT3Q9BXF9 490 aa23.7■■□□□ 1.38
TOP1MT-206ENST00000518951 UNC45AQ9H3U1 944 aa23.7■■□□□ 1.38
TOP1MT-206ENST00000518951 SPC25Q9HBM1 224 aa23.7■■□□□ 1.38
TOP1MT-206ENST00000518951 CST5P28325 142 aaPredicted RBP23.69■■□□□ 1.38
TOP1MT-206ENST00000518951 ACTR2P61160 394 aa23.69■■□□□ 1.38
TOP1MT-206ENST00000518951 ATP2C1P98194 919 aaPredicted RBP23.69■■□□□ 1.38
TOP1MT-206ENST00000518951 DNM1Q05193 864 aaKnown RBP23.69■■□□□ 1.38
TOP1MT-206ENST00000518951 SPIRE1Q08AE8 756 aa23.69■■□□□ 1.38
TOP1MT-206ENST00000518951 IL17AQ16552 155 aa23.69■■□□□ 1.38
TOP1MT-206ENST00000518951 SLFN12Q8IYM2 578 aa23.69■■□□□ 1.38
TOP1MT-206ENST00000518951 EN2P19622 333 aaPredicted RBP23.68■■□□□ 1.38
TOP1MT-206ENST00000518951 CPT1AP50416 773 aa23.68■■□□□ 1.38
TOP1MT-206ENST00000518951 KCNA10Q16322 511 aa23.68■■□□□ 1.38
TOP1MT-206ENST00000518951 RNF180Q86T96 592 aa23.68■■□□□ 1.38
TOP1MT-206ENST00000518951 ARRDC4Q8NCT1 418 aa23.68■■□□□ 1.38
TOP1MT-206ENST00000518951 TTC12Q9H892 705 aaPredicted RBP23.68■■□□□ 1.38
TOP1MT-206ENST00000518951 PCDHA12Q9UN75 941 aa23.68■■□□□ 1.38
TOP1MT-206ENST00000518951 EML1O00423 815 aa23.68■■□□□ 1.38
TOP1MT-206ENST00000518951 NOP56O00567 594 aaKnown RBP23.68■■□□□ 1.38
TOP1MT-206ENST00000518951 CHMP2AO43633 222 aa23.68■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms