RNA–Protein interactions for RNA: ENST00000518825.5

CTNNA1-210, Transcript of catenin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CTNNA1, Length 3,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-210ENST00000518825 CAGE1Q8TC20 777 aa9.36□□□□□ -0.91
CTNNA1-210ENST00000518825 CRYGNQ8WXF5 182 aa9.36□□□□□ -0.91
CTNNA1-210ENST00000518825 RBM17Q96I25 401 aaKnown RBP9.36□□□□□ -0.91
CTNNA1-210ENST00000518825 CRACR2AQ9BSW2 395 aa9.36□□□□□ -0.91
CTNNA1-210ENST00000518825 KCNMB3Q9NPA1 279 aa9.36□□□□□ -0.91
CTNNA1-210ENST00000518825 KCNQ5Q9NR82 932 aa9.36□□□□□ -0.91
CTNNA1-210ENST00000518825 PANK4Q9NVE7 773 aa9.36□□□□□ -0.91
CTNNA1-210ENST00000518825 SERPINB13Q9UIV8 391 aa9.36□□□□□ -0.91
CTNNA1-210ENST00000518825 COL4A3BPQ9Y5P4 624 aa9.36□□□□□ -0.91
CTNNA1-210ENST00000518825 ATAD5Q96QE3 1844 aa9.35□□□□□ -0.91
CTNNA1-210ENST00000518825 C6orf229H3BNL8 230 aa9.35□□□□□ -0.91
CTNNA1-210ENST00000518825 TRIM66O15016 1216 aa9.35□□□□□ -0.91
CTNNA1-210ENST00000518825 ZBTB5O15062 677 aa9.35□□□□□ -0.91
CTNNA1-210ENST00000518825 BBOX1O75936 387 aa9.35□□□□□ -0.91
CTNNA1-210ENST00000518825 IPO7O95373 1038 aaKnown RBP9.35□□□□□ -0.91
CTNNA1-210ENST00000518825 PSMC6P62333 389 aa9.35□□□□□ -0.91
CTNNA1-210ENST00000518825 ITIH3Q06033 890 aa9.35□□□□□ -0.91
CTNNA1-210ENST00000518825 FAM83BQ5T0W9 1011 aa9.35□□□□□ -0.91
CTNNA1-210ENST00000518825 APOBEC3HQ6NTF7 200 aaKnown RBP9.35□□□□□ -0.91
CTNNA1-210ENST00000518825 CDC42EP5Q6NZY7 148 aa9.35□□□□□ -0.91
CTNNA1-210ENST00000518825 TRIM59Q8IWR1 403 aa9.35□□□□□ -0.91
CTNNA1-210ENST00000518825 NELFCDQ8IXH7 590 aa9.35□□□□□ -0.91
CTNNA1-210ENST00000518825 TSEN2Q8NCE0 465 aaKnown RBP9.35□□□□□ -0.91
CTNNA1-210ENST00000518825 TBC1D22AQ8WUA7 517 aa9.35□□□□□ -0.91
CTNNA1-210ENST00000518825 ZFP91Q96JP5 570 aaPredicted RBP9.35□□□□□ -0.91
CTNNA1-210ENST00000518825 PACSIN1Q9BY11 444 aa9.35□□□□□ -0.91
CTNNA1-210ENST00000518825 PLEKHA4Q9H4M7 779 aa9.35□□□□□ -0.91
CTNNA1-210ENST00000518825 RBM12Q9NTZ6 932 aaKnown RBP9.35□□□□□ -0.91
CTNNA1-210ENST00000518825 FEZ2Q9UHY8 353 aaPredicted RBP9.35□□□□□ -0.91
CTNNA1-210ENST00000518825 PCDHA12Q9UN75 941 aa9.35□□□□□ -0.91
CTNNA1-210ENST00000518825 KIAA1024Q9UPX6 916 aa9.35□□□□□ -0.91
CTNNA1-210ENST00000518825 FAM196BA6NMK8 535 aa9.35□□□□□ -0.91
CTNNA1-210ENST00000518825 POLRMTO00411 1230 aaKnown RBP9.35□□□□□ -0.91
CTNNA1-210ENST00000518825 AKR1B10O60218 316 aa9.35□□□□□ -0.91
CTNNA1-210ENST00000518825 TAL1P17542 331 aaPredicted RBP9.35□□□□□ -0.91
CTNNA1-210ENST00000518825 CYP11B2P19099 503 aa9.35□□□□□ -0.91
CTNNA1-210ENST00000518825 MAGEA1P43355 309 aa9.35□□□□□ -0.91
CTNNA1-210ENST00000518825 FKBP3Q00688 224 aaKnown RBP9.35□□□□□ -0.91
CTNNA1-210ENST00000518825 PPP1R18Q6NYC8 613 aa9.35□□□□□ -0.91
CTNNA1-210ENST00000518825 ZC3H3Q8IXZ2 948 aaKnown RBP9.35□□□□□ -0.91
CTNNA1-210ENST00000518825 IQCDQ96DY2 449 aa9.35□□□□□ -0.91
CTNNA1-210ENST00000518825 PSTPIP2Q9H939 334 aa9.35□□□□□ -0.91
CTNNA1-210ENST00000518825 FRMD3A2A2Y4 597 aa9.35□□□□□ -0.91
CTNNA1-210ENST00000518825 TRAF5O00463 557 aa9.35□□□□□ -0.91
CTNNA1-210ENST00000518825 TACC1O75410 805 aa9.35□□□□□ -0.91
CTNNA1-210ENST00000518825 POLD1P28340 1107 aa9.35□□□□□ -0.91
CTNNA1-210ENST00000518825 MATR3P43243 847 aaKnown RBP eCLIP9.35□□□□□ -0.916e-7■■■□□ 18.4
CTNNA1-210ENST00000518825 SLC12A3P55017 1021 aa9.35□□□□□ -0.91
CTNNA1-210ENST00000518825 MARSP56192 900 aaKnown RBP9.35□□□□□ -0.91
CTNNA1-210ENST00000518825 FAM26FQ5R3K3 315 aa9.35□□□□□ -0.91
CTNNA1-210ENST00000518825 C10orf71Q711Q0 1435 aa9.35□□□□□ -0.91
CTNNA1-210ENST00000518825 DNAAF5Q86Y56 855 aa9.35□□□□□ -0.91
CTNNA1-210ENST00000518825 PROM2Q8N271 834 aa9.35□□□□□ -0.91
CTNNA1-210ENST00000518825 ANKRD31Q8N7Z5 1873 aa9.35□□□□□ -0.91
CTNNA1-210ENST00000518825 CUL5Q93034 780 aa9.35□□□□□ -0.91
CTNNA1-210ENST00000518825 USP21Q9UK80 565 aa9.35□□□□□ -0.91
CTNNA1-210ENST00000518825 A0A087X0T9 212 aa9.34□□□□□ -0.91
CTNNA1-210ENST00000518825 SSU72P8A0A1W2PR75 194 aa9.34□□□□□ -0.91
CTNNA1-210ENST00000518825 ZSCAN5CA6NGD5 496 aaPredicted RBP9.34□□□□□ -0.91
CTNNA1-210ENST00000518825 MEIS2O14770 477 aa9.34□□□□□ -0.91
CTNNA1-210ENST00000518825 USO1O60763 962 aaKnown RBP9.34□□□□□ -0.91
CTNNA1-210ENST00000518825 FAM228BP0C875 321 aa9.34□□□□□ -0.91
CTNNA1-210ENST00000518825 GANQ9H2C0 597 aa9.34□□□□□ -0.91
CTNNA1-210ENST00000518825 DEF6Q9H4E7 631 aa9.34□□□□□ -0.91
CTNNA1-210ENST00000518825 USP40Q9NVE5 1235 aa9.34□□□□□ -0.91
CTNNA1-210ENST00000518825 CEP72Q9P209 647 aa9.34□□□□□ -0.91
CTNNA1-210ENST00000518825 FAM184BQ9ULE4 1060 aa9.34□□□□□ -0.91
CTNNA1-210ENST00000518825 UTRNP46939 3433 aa9.34□□□□□ -0.91
CTNNA1-210ENST00000518825 PLA2G4BP0C869 781 aa9.34□□□□□ -0.91
CTNNA1-210ENST00000518825 KLRC1P26715 233 aa9.34□□□□□ -0.91
CTNNA1-210ENST00000518825 POLR2FP61218 127 aaKnown RBP9.34□□□□□ -0.91
CTNNA1-210ENST00000518825 TRADDQ15628 312 aa9.34□□□□□ -0.91
CTNNA1-210ENST00000518825 LENG9Q96B70 501 aa9.34□□□□□ -0.91
CTNNA1-210ENST00000518825 MBOAT7Q96N66 472 aa9.34□□□□□ -0.91
CTNNA1-210ENST00000518825 TANGO6Q9C0B7 1094 aa9.34□□□□□ -0.91
CTNNA1-210ENST00000518825 NRXN2Q9P2S2 1712 aa9.34□□□□□ -0.91
CTNNA1-210ENST00000518825 SRCAPQ6ZRS2 3230 aa9.34□□□□□ -0.91
CTNNA1-210ENST00000518825 POTEFA5A3E0 1075 aa9.34□□□□□ -0.91
CTNNA1-210ENST00000518825 GLI1P08151 1106 aa9.34□□□□□ -0.91
CTNNA1-210ENST00000518825 POTEIP0CG38 1075 aa9.34□□□□□ -0.91
CTNNA1-210ENST00000518825 ACTN1P12814 892 aa9.34□□□□□ -0.91
CTNNA1-210ENST00000518825 CACNB3P54284 484 aa9.34□□□□□ -0.91
CTNNA1-210ENST00000518825 SNAP25P60880 206 aa9.34□□□□□ -0.91
CTNNA1-210ENST00000518825 KCTD19Q17RG1 926 aaPredicted RBP9.34□□□□□ -0.91
CTNNA1-210ENST00000518825 DOK7Q18PE1 504 aa9.34□□□□□ -0.91
CTNNA1-210ENST00000518825 QRICH1Q2TAL8 776 aa9.34□□□□□ -0.91
CTNNA1-210ENST00000518825 HSP90B2PQ58FF3 399 aa9.34□□□□□ -0.91
CTNNA1-210ENST00000518825 POTEGQ6S5H5 508 aa9.34□□□□□ -0.91
CTNNA1-210ENST00000518825 POTEEQ6S8J3 1075 aa9.34□□□□□ -0.91
CTNNA1-210ENST00000518825 SRLQ86TD4 932 aa9.34□□□□□ -0.91
CTNNA1-210ENST00000518825 SLF2Q8IX21 1173 aa9.34□□□□□ -0.91
CTNNA1-210ENST00000518825 ETNPPLQ8TBG4 499 aa9.34□□□□□ -0.91
CTNNA1-210ENST00000518825 CRAMP1Q96RY5 1269 aa9.34□□□□□ -0.91
CTNNA1-210ENST00000518825 LSM14BQ9BX40 385 aaKnown RBP9.34□□□□□ -0.91
CTNNA1-210ENST00000518825 RAB34Q9BZG1 259 aa9.34□□□□□ -0.91
CTNNA1-210ENST00000518825 EDEM3Q9BZQ6 932 aa9.34□□□□□ -0.91
CTNNA1-210ENST00000518825 EHD4Q9H223 541 aa9.34□□□□□ -0.91
CTNNA1-210ENST00000518825 PACSIN2Q9UNF0 486 aaPredicted RBP9.34□□□□□ -0.91
CTNNA1-210ENST00000518825 HYOU1Q9Y4L1 999 aa9.34□□□□□ -0.91
CTNNA1-210ENST00000518825 CYP3A7-CYP3A51PA0A087WV96 503 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms