RNA–Protein interactions for RNA: ENST00000518723.1

TRAPPC9-204, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-204ENST00000518723 EP400NLQ6ZTU2 488 aa14.38□□□□□ -0.11
TRAPPC9-204ENST00000518723 VSIG10LQ86VR7 867 aa14.38□□□□□ -0.11
TRAPPC9-204ENST00000518723 IQCA1Q86XH1 822 aa14.38□□□□□ -0.11
TRAPPC9-204ENST00000518723 APBB2Q92870 758 aa14.38□□□□□ -0.11
TRAPPC9-204ENST00000518723 IFIH1Q9BYX4 1025 aaKnown RBP14.38□□□□□ -0.11
TRAPPC9-204ENST00000518723 MYO7AQ13402 2215 aa14.38□□□□□ -0.11
TRAPPC9-204ENST00000518723 H3BRB1 525 aa14.37□□□□□ -0.11
TRAPPC9-204ENST00000518723 TREHO43280 583 aa14.37□□□□□ -0.11
TRAPPC9-204ENST00000518723 PARP1P09874 1014 aaKnown RBP14.37□□□□□ -0.11
TRAPPC9-204ENST00000518723 LINC00271P0C7V0 271 aa14.37□□□□□ -0.11
TRAPPC9-204ENST00000518723 SMIM10L2AP0DMW4 78 aa14.37□□□□□ -0.11
TRAPPC9-204ENST00000518723 SMIM10L2BP0DMW5 78 aa14.37□□□□□ -0.11
TRAPPC9-204ENST00000518723 PDE1AP54750 535 aa14.37□□□□□ -0.11
TRAPPC9-204ENST00000518723 SP2Q02086 613 aa14.37□□□□□ -0.11
TRAPPC9-204ENST00000518723 IL17RAQ96F46 866 aa14.37□□□□□ -0.11
TRAPPC9-204ENST00000518723 C11orf84Q9BUA3 381 aaPredicted RBP14.37□□□□□ -0.11
TRAPPC9-204ENST00000518723 AMNQ9BXJ7 453 aa14.37□□□□□ -0.11
TRAPPC9-204ENST00000518723 OSBPL7Q9BZF2 842 aa14.37□□□□□ -0.11
TRAPPC9-204ENST00000518723 TUT1Q9H6E5 874 aaKnown RBP14.37□□□□□ -0.11
TRAPPC9-204ENST00000518723 RWDD3Q9Y3V2 267 aa14.37□□□□□ -0.11
TRAPPC9-204ENST00000518723 MBTPS2O43462 519 aa14.36□□□□□ -0.11
TRAPPC9-204ENST00000518723 DHX16O60231 1041 aaKnown RBP14.36□□□□□ -0.11
TRAPPC9-204ENST00000518723 LGALS2P05162 132 aa14.36□□□□□ -0.11
TRAPPC9-204ENST00000518723 MYCLP12524 364 aaPredicted RBP14.36□□□□□ -0.11
TRAPPC9-204ENST00000518723 CTNNB1P35222 781 aa14.36□□□□□ -0.11
TRAPPC9-204ENST00000518723 BMPR1AP36894 532 aa14.36□□□□□ -0.11
TRAPPC9-204ENST00000518723 HYAL1Q12794 435 aa14.36□□□□□ -0.11
TRAPPC9-204ENST00000518723 NMIQ13287 307 aaPredicted RBP14.36□□□□□ -0.11
TRAPPC9-204ENST00000518723 SMAD4Q13485 552 aaKnown RBP14.36□□□□□ -0.11
TRAPPC9-204ENST00000518723 PGM5Q15124 567 aa14.36□□□□□ -0.11
TRAPPC9-204ENST00000518723 FAM26DQ5JW98 314 aa14.36□□□□□ -0.11
TRAPPC9-204ENST00000518723 FIBCD1Q8N539 461 aa14.36□□□□□ -0.11
TRAPPC9-204ENST00000518723 ENAHQ8N8S7 591 aaPredicted RBP14.36□□□□□ -0.11
TRAPPC9-204ENST00000518723 CLP1Q92989 425 aaKnown RBP14.36□□□□□ -0.11
TRAPPC9-204ENST00000518723 MTMR8Q96EF0 704 aa14.36□□□□□ -0.11
TRAPPC9-204ENST00000518723 RNPEPQ9H4A4 650 aa14.36□□□□□ -0.11
TRAPPC9-204ENST00000518723 MLXIPQ9HAP2 919 aa14.36□□□□□ -0.11
TRAPPC9-204ENST00000518723 USP34Q70CQ2 3546 aa14.36□□□□□ -0.11
TRAPPC9-204ENST00000518723 ZNF213O14771 459 aa14.35□□□□□ -0.11
TRAPPC9-204ENST00000518723 SORBS3O60504 671 aa14.35□□□□□ -0.11
TRAPPC9-204ENST00000518723 KDM4AO75164 1064 aa14.35□□□□□ -0.11
TRAPPC9-204ENST00000518723 CTSHP09668 335 aa14.35□□□□□ -0.11
TRAPPC9-204ENST00000518723 GNAT1P11488 350 aa14.35□□□□□ -0.11
TRAPPC9-204ENST00000518723 CCND2P30279 289 aa14.35□□□□□ -0.11
TRAPPC9-204ENST00000518723 MFAP1P55081 439 aaKnown RBP14.35□□□□□ -0.11
TRAPPC9-204ENST00000518723 DLX2Q07687 328 aaPredicted RBP14.35□□□□□ -0.11
TRAPPC9-204ENST00000518723 BMP8AQ7Z5Y6 402 aa14.35□□□□□ -0.11
TRAPPC9-204ENST00000518723 RNF135Q8IUD6 432 aa14.35□□□□□ -0.11
TRAPPC9-204ENST00000518723 IL31RAQ8NI17 732 aa14.35□□□□□ -0.11
TRAPPC9-204ENST00000518723 SNX27Q96L92 541 aa14.35□□□□□ -0.11
TRAPPC9-204ENST00000518723 ZSCAN10Q96SZ4 725 aaPredicted RBP14.35□□□□□ -0.11
TRAPPC9-204ENST00000518723 USP26Q9BXU7 913 aa14.35□□□□□ -0.11
TRAPPC9-204ENST00000518723 RC3H2Q9HBD1 1191 aaKnown RBP14.35□□□□□ -0.11
TRAPPC9-204ENST00000518723 VAT1LQ9HCJ6 419 aa14.35□□□□□ -0.11
TRAPPC9-204ENST00000518723 ZBTB47Q9UFB7 747 aaPredicted RBP14.35□□□□□ -0.11
TRAPPC9-204ENST00000518723 MUTYHQ9UIF7 546 aa14.35□□□□□ -0.11
TRAPPC9-204ENST00000518723 RALGAPA2Q2PPJ7 1873 aa14.35□□□□□ -0.11
TRAPPC9-204ENST00000518723 TECTAO75443 2155 aa14.34□□□□□ -0.11
TRAPPC9-204ENST00000518723 GRM6O15303 877 aa14.34□□□□□ -0.11
TRAPPC9-204ENST00000518723 PPP1R11O60927 126 aaPredicted RBP14.34□□□□□ -0.11
TRAPPC9-204ENST00000518723 ADAM17P78536 824 aa14.34□□□□□ -0.11
TRAPPC9-204ENST00000518723 ANKRD45Q5TZF3 282 aa14.34□□□□□ -0.11
TRAPPC9-204ENST00000518723 EDAQ92838 391 aa14.34□□□□□ -0.11
TRAPPC9-204ENST00000518723 GPKOWQ92917 476 aaPredicted RBP eCLIP14.34□□□□□ -0.11
TRAPPC9-204ENST00000518723 ADGRA3Q8IWK6 1321 aa14.34□□□□□ -0.11
TRAPPC9-204ENST00000518723 TRIM6-TRIM34B2RNG4 842 aa14.33□□□□□ -0.12
TRAPPC9-204ENST00000518723 NOP56O00567 594 aaKnown RBP14.33□□□□□ -0.12
TRAPPC9-204ENST00000518723 ZBTB5O15062 677 aa14.33□□□□□ -0.12
TRAPPC9-204ENST00000518723 TBX10O75333 385 aa14.33□□□□□ -0.12
TRAPPC9-204ENST00000518723 MMP1P03956 469 aa14.33□□□□□ -0.12
TRAPPC9-204ENST00000518723 HOXA13P31271 388 aaPredicted RBP14.33□□□□□ -0.12
TRAPPC9-204ENST00000518723 ICAM3P32942 547 aa14.33□□□□□ -0.12
TRAPPC9-204ENST00000518723 CLUL1Q15846 466 aa14.33□□□□□ -0.12
TRAPPC9-204ENST00000518723 PKN1Q16512 942 aa14.33□□□□□ -0.12
TRAPPC9-204ENST00000518723 METTL7BQ6UX53 244 aa14.33□□□□□ -0.12
TRAPPC9-204ENST00000518723 STAG2Q8N3U4 1231 aa14.33□□□□□ -0.12
TRAPPC9-204ENST00000518723 SETD4Q9NVD3 440 aa14.33□□□□□ -0.12
TRAPPC9-204ENST00000518723 ZSWIM5Q9P217 1185 aa14.33□□□□□ -0.12
TRAPPC9-204ENST00000518723 CD207Q9UJ71 328 aa14.33□□□□□ -0.12
TRAPPC9-204ENST00000518723 PCDHA1Q9Y5I3 950 aa14.33□□□□□ -0.12
TRAPPC9-204ENST00000518723 CACNA1HO95180 2353 aa14.33□□□□□ -0.12
TRAPPC9-204ENST00000518723 MYH7BA7E2Y1 1941 aa14.33□□□□□ -0.12
TRAPPC9-204ENST00000518723 ZDBF2Q9HCK1 2354 aa14.32□□□□□ -0.12
TRAPPC9-204ENST00000518723 NLRC5Q86WI3 1866 aa14.32□□□□□ -0.12
TRAPPC9-204ENST00000518723 B4E1Z4 1266 aa14.32□□□□□ -0.12
TRAPPC9-204ENST00000518723 KLRF2D3W0D1 207 aa14.32□□□□□ -0.12
TRAPPC9-204ENST00000518723 GCOM1H8Y6P7 765 aaPredicted RBP14.32□□□□□ -0.12
TRAPPC9-204ENST00000518723 STXBP3O00186 592 aa14.32□□□□□ -0.12
TRAPPC9-204ENST00000518723 STAM2O75886 525 aa14.32□□□□□ -0.12
TRAPPC9-204ENST00000518723 EYA4O95677 639 aa14.32□□□□□ -0.12
TRAPPC9-204ENST00000518723 POLR2MP0CAP2 368 aa14.32□□□□□ -0.12
TRAPPC9-204ENST00000518723 PTPN5P54829 565 aa14.32□□□□□ -0.12
TRAPPC9-204ENST00000518723 TRAF1Q13077 416 aa14.32□□□□□ -0.12
TRAPPC9-204ENST00000518723 NEDD9Q14511 834 aa14.32□□□□□ -0.12
TRAPPC9-204ENST00000518723 GNPTABQ3T906 1256 aa14.32□□□□□ -0.12
TRAPPC9-204ENST00000518723 PRSS33Q8NF86 280 aa14.32□□□□□ -0.12
TRAPPC9-204ENST00000518723 ZNF689Q96CS4 500 aaPredicted RBP14.32□□□□□ -0.12
TRAPPC9-204ENST00000518723 MSLNLQ96KJ4 702 aa14.32□□□□□ -0.12
TRAPPC9-204ENST00000518723 INPP4AQ96PE3 977 aaPredicted RBP14.32□□□□□ -0.12
TRAPPC9-204ENST00000518723 GPR20Q99678 358 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms