RNA–Protein interactions for RNA: ENST00000518716.1

PABPC1-207, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 694 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-207ENST00000518716 HDAC5Q9UQL6 1122 aa7.34□□□□□ -1.23
PABPC1-207ENST00000518716 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.34□□□□□ -1.23
PABPC1-207ENST00000518716 IVNS1ABPQ9Y6Y0 642 aa7.34□□□□□ -1.23
PABPC1-207ENST00000518716 ZNFX1Q9P2E3 1918 aaKnown RBP7.34□□□□□ -1.23
PABPC1-207ENST00000518716 F8W735 103 aaPredicted RBP7.33□□□□□ -1.24
PABPC1-207ENST00000518716 SRGAP3O43295 1099 aa7.33□□□□□ -1.24
PABPC1-207ENST00000518716 TIMP1P01033 207 aa7.33□□□□□ -1.24
PABPC1-207ENST00000518716 UQCRFS1P1P0C7P4 283 aa7.33□□□□□ -1.24
PABPC1-207ENST00000518716 ZNF865P0CJ78 1059 aaPredicted RBP7.33□□□□□ -1.24
PABPC1-207ENST00000518716 CDK7P50613 346 aa7.33□□□□□ -1.24
PABPC1-207ENST00000518716 MRPS5P82675 430 aaKnown RBP7.33□□□□□ -1.24
PABPC1-207ENST00000518716 SLFN5Q08AF3 891 aa7.33□□□□□ -1.24
PABPC1-207ENST00000518716 ZYXQ15942 572 aaKnown RBP7.33□□□□□ -1.24
PABPC1-207ENST00000518716 TMEM240Q5SV17 173 aa7.33□□□□□ -1.24
PABPC1-207ENST00000518716 BTLAQ7Z6A9 289 aa7.33□□□□□ -1.24
PABPC1-207ENST00000518716 ZDHHC13Q8IUH4 622 aa7.33□□□□□ -1.24
PABPC1-207ENST00000518716 SIAH1Q8IUQ4 282 aa7.33□□□□□ -1.24
PABPC1-207ENST00000518716 CRACR2BQ8N4Y2 399 aaPredicted RBP7.33□□□□□ -1.24
PABPC1-207ENST00000518716 KLHDC9Q8NEP7 349 aa7.33□□□□□ -1.24
PABPC1-207ENST00000518716 PKNOX2Q96KN3 472 aa7.33□□□□□ -1.24
PABPC1-207ENST00000518716 NEUROD6Q96NK8 337 aa7.33□□□□□ -1.24
PABPC1-207ENST00000518716 UHRF1Q96T88 793 aaPredicted RBP7.33□□□□□ -1.24
PABPC1-207ENST00000518716 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.33□□□□□ -1.24
PABPC1-207ENST00000518716 KRTAP4-11Q9BYQ6 195 aa7.33□□□□□ -1.24
PABPC1-207ENST00000518716 PBX4Q9BYU1 374 aa7.33□□□□□ -1.24
PABPC1-207ENST00000518716 MROH8Q9H579 483 aa7.33□□□□□ -1.24
PABPC1-207ENST00000518716 GPR108Q9NPR9 543 aa7.33□□□□□ -1.24
PABPC1-207ENST00000518716 HOXC10Q9NYD6 342 aa7.33□□□□□ -1.24
PABPC1-207ENST00000518716 FRRS1LQ9P0K9 344 aa7.33□□□□□ -1.24
PABPC1-207ENST00000518716 THEGQ9P2T0 379 aa7.33□□□□□ -1.24
PABPC1-207ENST00000518716 SAP30BPQ9UHR5 308 aaKnown RBP7.33□□□□□ -1.24
PABPC1-207ENST00000518716 SERPINB13Q9UIV8 391 aa7.33□□□□□ -1.24
PABPC1-207ENST00000518716 ADAMTS5Q9UNA0 930 aa7.33□□□□□ -1.24
PABPC1-207ENST00000518716 A0A0G2JMZ2 1700 aa7.32□□□□□ -1.24
PABPC1-207ENST00000518716 MYO5AQ9Y4I1 1855 aaKnown RBP7.32□□□□□ -1.24
PABPC1-207ENST00000518716 TCF20Q9UGU0 1960 aaKnown RBP7.32□□□□□ -1.24
PABPC1-207ENST00000518716 A0A1W2PQ45 241 aaPredicted RBP7.32□□□□□ -1.24
PABPC1-207ENST00000518716 A0A1W2PQY0 241 aa7.32□□□□□ -1.24
PABPC1-207ENST00000518716 GRXCR1A8MXD5 290 aa7.32□□□□□ -1.24
PABPC1-207ENST00000518716 E9PSI1 815 aa7.32□□□□□ -1.24
PABPC1-207ENST00000518716 PGK1P00558 417 aa7.32□□□□□ -1.24
PABPC1-207ENST00000518716 HLA-DOAP06340 250 aa7.32□□□□□ -1.24
PABPC1-207ENST00000518716 RAG1P15918 1043 aa7.32□□□□□ -1.24
PABPC1-207ENST00000518716 PLCD1P51178 756 aa7.32□□□□□ -1.24
PABPC1-207ENST00000518716 PSMA6P60900 246 aaKnown RBP7.32□□□□□ -1.24
PABPC1-207ENST00000518716 DYNLL1P63167 89 aaKnown RBP7.32□□□□□ -1.24
PABPC1-207ENST00000518716 ABCB5Q2M3G0 1257 aa7.32□□□□□ -1.24
PABPC1-207ENST00000518716 CERKLQ49MI3 558 aaPredicted RBP7.32□□□□□ -1.24
PABPC1-207ENST00000518716 WDR78Q5VTH9 848 aa7.32□□□□□ -1.24
PABPC1-207ENST00000518716 MFSD5Q6N075 450 aa7.32□□□□□ -1.24
PABPC1-207ENST00000518716 ATF7IPQ6VMQ6 1270 aa7.32□□□□□ -1.24
PABPC1-207ENST00000518716 Q6ZS46 218 aa7.32□□□□□ -1.24
PABPC1-207ENST00000518716 TMEM130Q8N3G9 435 aa7.32□□□□□ -1.24
PABPC1-207ENST00000518716 MB21D1Q8N884 522 aa7.32□□□□□ -1.24
PABPC1-207ENST00000518716 PRDM12Q9H4Q4 367 aa7.32□□□□□ -1.24
PABPC1-207ENST00000518716 XPNPEP3Q9NQH7 507 aa7.32□□□□□ -1.24
PABPC1-207ENST00000518716 PIH1D3Q9NQM4 214 aaKnown RBP7.32□□□□□ -1.24
PABPC1-207ENST00000518716 TMEM39AQ9NV64 488 aa7.32□□□□□ -1.24
PABPC1-207ENST00000518716 CXXC1Q9P0U4 656 aaPredicted RBP7.32□□□□□ -1.24
PABPC1-207ENST00000518716 ADGRE2Q9UHX3 823 aa7.32□□□□□ -1.24
PABPC1-207ENST00000518716 NOB1Q9ULX3 412 aaKnown RBP7.32□□□□□ -1.24
PABPC1-207ENST00000518716 DIS3Q9Y2L1 958 aaKnown RBP7.32□□□□□ -1.24
PABPC1-207ENST00000518716 RAXQ9Y2V3 346 aa7.32□□□□□ -1.24
PABPC1-207ENST00000518716 PLXNA1Q9UIW2 1896 aa7.32□□□□□ -1.24
PABPC1-207ENST00000518716 MYH1P12882 1939 aa7.31□□□□□ -1.24
PABPC1-207ENST00000518716 PNMA6EA0A0J9YXQ4 647 aa7.31□□□□□ -1.24
PABPC1-207ENST00000518716 ZBTB42B2RXF5 422 aa7.31□□□□□ -1.24
PABPC1-207ENST00000518716 GSC2O15499 205 aa7.31□□□□□ -1.24
PABPC1-207ENST00000518716 PQBP1O60828 265 aaKnown RBP7.31□□□□□ -1.24
PABPC1-207ENST00000518716 RARBP10826 455 aa7.31□□□□□ -1.24
PABPC1-207ENST00000518716 ACLYP53396 1101 aa7.31□□□□□ -1.24
PABPC1-207ENST00000518716 SEPT2Q15019 361 aa7.31□□□□□ -1.24
PABPC1-207ENST00000518716 RAB3GAP1Q15042 981 aa7.31□□□□□ -1.24
PABPC1-207ENST00000518716 EML3Q32P44 896 aa7.31□□□□□ -1.24
PABPC1-207ENST00000518716 ZNF792Q3KQV3 632 aa7.31□□□□□ -1.24
PABPC1-207ENST00000518716 RNF180Q86T96 592 aa7.31□□□□□ -1.24
PABPC1-207ENST00000518716 SLC44A5Q8NCS7 719 aa7.31□□□□□ -1.24
PABPC1-207ENST00000518716 VWCEQ96DN2 955 aa7.31□□□□□ -1.24
PABPC1-207ENST00000518716 NECAB3Q96P71 396 aaPredicted RBP7.31□□□□□ -1.24
PABPC1-207ENST00000518716 PNMA5Q96PV4 448 aa7.31□□□□□ -1.24
PABPC1-207ENST00000518716 FEZ1Q99689 392 aa7.31□□□□□ -1.24
PABPC1-207ENST00000518716 DBNDD2Q9BQY9 259 aa7.31□□□□□ -1.24
PABPC1-207ENST00000518716 NOL10Q9BSC4 688 aaKnown RBP7.31□□□□□ -1.24
PABPC1-207ENST00000518716 TINF2Q9BSI4 451 aa7.31□□□□□ -1.24
PABPC1-207ENST00000518716 C1QTNF1Q9BXJ1 281 aa7.31□□□□□ -1.24
PABPC1-207ENST00000518716 TSPAN10Q9H1Z9 355 aaPredicted RBP7.31□□□□□ -1.24
PABPC1-207ENST00000518716 CWC22Q9HCG8 908 aaKnown RBP7.31□□□□□ -1.24
PABPC1-207ENST00000518716 SLC5A4Q9NY91 659 aa7.31□□□□□ -1.24
PABPC1-207ENST00000518716 NOD1Q9Y239 953 aa7.31□□□□□ -1.24
PABPC1-207ENST00000518716 ELP1O95163 1332 aa7.3□□□□□ -1.24
PABPC1-207ENST00000518716 GNAI3P08754 354 aa7.3□□□□□ -1.24
PABPC1-207ENST00000518716 POU3F3P20264 500 aaPredicted RBP7.3□□□□□ -1.24
PABPC1-207ENST00000518716 CST5P28325 142 aaPredicted RBP7.3□□□□□ -1.24
PABPC1-207ENST00000518716 ZAP70P43403 619 aa7.3□□□□□ -1.24
PABPC1-207ENST00000518716 NKX3-2P78367 333 aa7.3□□□□□ -1.24
PABPC1-207ENST00000518716 TMEM132BQ14DG7 1078 aa7.3□□□□□ -1.24
PABPC1-207ENST00000518716 GORABQ5T7V8 394 aa7.3□□□□□ -1.24
PABPC1-207ENST00000518716 ZNF365Q70YC5 407 aa7.3□□□□□ -1.24
PABPC1-207ENST00000518716 DTX1Q86Y01 620 aa7.3□□□□□ -1.24
PABPC1-207ENST00000518716 REPS2Q8NFH8 660 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms