RNA–Protein interactions for RNA: ENST00000515587.1

PDCD6-211, Transcript of programmed cell death 6, humanhuman

TSL 1 (best)

Gene PDCD6, Length 855 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-211ENST00000515587 MARCH6O60337 910 aa17.09■□□□□ 0.33
PDCD6-211ENST00000515587 TDP2O95551 362 aa17.09■□□□□ 0.33
PDCD6-211ENST00000515587 GGPS1O95749 300 aa17.09■□□□□ 0.33
PDCD6-211ENST00000515587 PGK1P00558 417 aa17.09■□□□□ 0.33
PDCD6-211ENST00000515587 ATP2B1P20020 1258 aa17.09■□□□□ 0.33
PDCD6-211ENST00000515587 TRAPPC10P48553 1259 aa17.09■□□□□ 0.33
PDCD6-211ENST00000515587 CPT1AP50416 773 aa17.09■□□□□ 0.33
PDCD6-211ENST00000515587 SEMA3FQ13275 785 aa17.09■□□□□ 0.33
PDCD6-211ENST00000515587 Q4G0T1 1027 aa17.09■□□□□ 0.33
PDCD6-211ENST00000515587 GJC2Q5T442 439 aaPredicted RBP17.09■□□□□ 0.33
PDCD6-211ENST00000515587 PPP4R3AQ6IN85 833 aa17.09■□□□□ 0.33
PDCD6-211ENST00000515587 BRAPQ7Z569 592 aa17.09■□□□□ 0.33
PDCD6-211ENST00000515587 COPS5Q92905 334 aa17.09■□□□□ 0.33
PDCD6-211ENST00000515587 GDF15Q99988 308 aa17.09■□□□□ 0.33
PDCD6-211ENST00000515587 ZNF577Q9BSK1 485 aa17.09■□□□□ 0.33
PDCD6-211ENST00000515587 CRISPLD2Q9H0B8 497 aa17.09■□□□□ 0.33
PDCD6-211ENST00000515587 UPF3AQ9H1J1 476 aaKnown RBP17.09■□□□□ 0.33
PDCD6-211ENST00000515587 AGO4Q9HCK5 861 aaKnown RBP17.09■□□□□ 0.33
PDCD6-211ENST00000515587 PKD2L1Q9P0L9 805 aa17.09■□□□□ 0.33
PDCD6-211ENST00000515587 OGDHLQ9ULD0 1010 aa17.09■□□□□ 0.33
PDCD6-211ENST00000515587 ARP10275 920 aa17.08■□□□□ 0.32
PDCD6-211ENST00000515587 GNASQ5JWF2 1037 aa17.08■□□□□ 0.32
PDCD6-211ENST00000515587 CELF3Q5SZQ8 465 aaKnown RBP17.08■□□□□ 0.32
PDCD6-211ENST00000515587 TMEM63BQ5T3F8 832 aa17.08■□□□□ 0.32
PDCD6-211ENST00000515587 ANKLE1Q8NAG6 615 aa17.08■□□□□ 0.32
PDCD6-211ENST00000515587 EMID1Q96A84 441 aaPredicted RBP17.08■□□□□ 0.32
PDCD6-211ENST00000515587 MBOAT7Q96N66 472 aa17.08■□□□□ 0.32
PDCD6-211ENST00000515587 NFASCO94856 1347 aa17.07■□□□□ 0.32
PDCD6-211ENST00000515587 IPO5O00410 1097 aaKnown RBP17.07■□□□□ 0.32
PDCD6-211ENST00000515587 NOP56O00567 594 aaKnown RBP17.07■□□□□ 0.32
PDCD6-211ENST00000515587 BAG4O95429 457 aaKnown RBP17.07■□□□□ 0.32
PDCD6-211ENST00000515587 KCNA2P16389 499 aa17.07■□□□□ 0.32
PDCD6-211ENST00000515587 SP2Q02086 613 aa17.07■□□□□ 0.32
PDCD6-211ENST00000515587 ARHGAP1Q07960 439 aa17.07■□□□□ 0.32
PDCD6-211ENST00000515587 ORC2Q13416 577 aaPredicted RBP17.07■□□□□ 0.32
PDCD6-211ENST00000515587 LRRC41Q15345 812 aa17.07■□□□□ 0.32
PDCD6-211ENST00000515587 FSCN1Q16658 493 aaKnown RBP17.07■□□□□ 0.32
PDCD6-211ENST00000515587 RILPL1Q5EBL4 403 aa17.07■□□□□ 0.32
PDCD6-211ENST00000515587 TTC38Q5R3I4 469 aa17.07■□□□□ 0.32
PDCD6-211ENST00000515587 MYSM1Q5VVJ2 828 aa17.07■□□□□ 0.32
PDCD6-211ENST00000515587 METTL7BQ6UX53 244 aa17.07■□□□□ 0.32
PDCD6-211ENST00000515587 CYFIP1Q7L576 1253 aa17.07■□□□□ 0.32
PDCD6-211ENST00000515587 FERMT3Q86UX7 667 aa17.07■□□□□ 0.32
PDCD6-211ENST00000515587 PCSK9Q8NBP7 692 aaKnown RBP17.07■□□□□ 0.32
PDCD6-211ENST00000515587 SPATA33Q96N06 139 aa17.07■□□□□ 0.32
PDCD6-211ENST00000515587 ZSCAN16Q9H4T2 348 aaPredicted RBP17.07■□□□□ 0.32
PDCD6-211ENST00000515587 TBC1D22BQ9NU19 505 aa17.07■□□□□ 0.32
PDCD6-211ENST00000515587 MTMR6Q9Y217 621 aa17.07■□□□□ 0.32
PDCD6-211ENST00000515587 DNM1LO00429 736 aa17.06■□□□□ 0.32
PDCD6-211ENST00000515587 MSH4O15457 936 aa17.06■□□□□ 0.32
PDCD6-211ENST00000515587 EDIL3O43854 480 aa17.06■□□□□ 0.32
PDCD6-211ENST00000515587 SORBS3O60504 671 aa17.06■□□□□ 0.32
PDCD6-211ENST00000515587 NEMFO60524 1076 aa17.06■□□□□ 0.32
PDCD6-211ENST00000515587 ATP9AO75110 1047 aa17.06■□□□□ 0.32
PDCD6-211ENST00000515587 ADAMTS4O75173 837 aa17.06■□□□□ 0.32
PDCD6-211ENST00000515587 CST5P28325 142 aaPredicted RBP17.06■□□□□ 0.32
PDCD6-211ENST00000515587 BMP8BP34820 402 aa17.06■□□□□ 0.32
PDCD6-211ENST00000515587 PPTC7Q8NI37 304 aa17.06■□□□□ 0.32
PDCD6-211ENST00000515587 LENG9Q96B70 501 aa17.06■□□□□ 0.32
PDCD6-211ENST00000515587 TSEN34Q9BSV6 310 aaKnown RBP17.06■□□□□ 0.32
PDCD6-211ENST00000515587 JPH1Q9HDC5 661 aaPredicted RBP17.06■□□□□ 0.32
PDCD6-211ENST00000515587 TSHZ2Q9NRE2 1034 aa17.06■□□□□ 0.32
PDCD6-211ENST00000515587 POLR3EQ9NVU0 708 aa17.06■□□□□ 0.32
PDCD6-211ENST00000515587 ZMYND8Q9ULU4 1186 aaPredicted RBP17.06■□□□□ 0.32
PDCD6-211ENST00000515587 MYH15Q9Y2K3 1946 aa17.06■□□□□ 0.32
PDCD6-211ENST00000515587 VCANP13611 3396 aa17.05■□□□□ 0.32
PDCD6-211ENST00000515587 TBX3O15119 743 aa17.05■□□□□ 0.32
PDCD6-211ENST00000515587 SLC37A4O43826 429 aa17.05■□□□□ 0.32
PDCD6-211ENST00000515587 KPNA6O60684 536 aa17.05■□□□□ 0.32
PDCD6-211ENST00000515587 MCM7P33993 719 aa17.05■□□□□ 0.32
PDCD6-211ENST00000515587 NKX3-2P78367 333 aa17.05■□□□□ 0.32
PDCD6-211ENST00000515587 BEX3Q00994 111 aa17.05■□□□□ 0.32
PDCD6-211ENST00000515587 CALCRLQ16602 461 aa17.05■□□□□ 0.32
PDCD6-211ENST00000515587 LRCH2Q5VUJ6 765 aa17.05■□□□□ 0.32
PDCD6-211ENST00000515587 SLFN12Q8IYM2 578 aa17.05■□□□□ 0.32
PDCD6-211ENST00000515587 KLHDC9Q8NEP7 349 aa17.05■□□□□ 0.32
PDCD6-211ENST00000515587 AFG1LQ8WV93 481 aa17.05■□□□□ 0.32
PDCD6-211ENST00000515587 FAM20AQ96MK3 541 aa17.05■□□□□ 0.32
PDCD6-211ENST00000515587 RIT2Q99578 217 aa17.05■□□□□ 0.32
PDCD6-211ENST00000515587 TEKT3Q9BXF9 490 aa17.05■□□□□ 0.32
PDCD6-211ENST00000515587 PRDM6Q9NQX0 595 aa17.05■□□□□ 0.32
PDCD6-211ENST00000515587 SLC9A2Q9UBY0 812 aa17.05■□□□□ 0.32
PDCD6-211ENST00000515587 RBM19Q9Y4C8 960 aaKnown RBP17.05■□□□□ 0.32
PDCD6-211ENST00000515587 MOXD2PA6NHM9 499 aa17.04■□□□□ 0.32
PDCD6-211ENST00000515587 A6NJR5 290 aa17.04■□□□□ 0.32
PDCD6-211ENST00000515587 GAS7O60861 476 aa17.04■□□□□ 0.32
PDCD6-211ENST00000515587 ZSCAN22P10073 491 aaPredicted RBP17.04■□□□□ 0.32
PDCD6-211ENST00000515587 PTGS1P23219 599 aa17.04■□□□□ 0.32
PDCD6-211ENST00000515587 SP4Q02446 784 aa17.04■□□□□ 0.32
PDCD6-211ENST00000515587 RESTQ13127 1097 aa17.04■□□□□ 0.32
PDCD6-211ENST00000515587 ITGB3BPQ13352 177 aaPredicted RBP17.04■□□□□ 0.32
PDCD6-211ENST00000515587 ZNF174Q15697 407 aa17.04■□□□□ 0.32
PDCD6-211ENST00000515587 KCNA10Q16322 511 aa17.04■□□□□ 0.32
PDCD6-211ENST00000515587 DGKDQ16760 1214 aa17.04■□□□□ 0.32
PDCD6-211ENST00000515587 LRIT3Q3SXY7 679 aa17.04■□□□□ 0.32
PDCD6-211ENST00000515587 POTEDQ86YR6 584 aa17.04■□□□□ 0.32
PDCD6-211ENST00000515587 SLC5A5Q92911 643 aa17.04■□□□□ 0.32
PDCD6-211ENST00000515587 UIMC1Q96RL1 719 aa17.04■□□□□ 0.32
PDCD6-211ENST00000515587 MYADML2A6NDP7 307 aa17.03■□□□□ 0.32
PDCD6-211ENST00000515587 DDX39AO00148 427 aaKnown RBP17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms