RNA–Protein interactions for RNA: ENST00000514831.1

SMAD1-214, Transcript of SMAD family member 1, humanhuman

TSL 2

Gene SMAD1, Length 569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-214ENST00000514831 KCNA5P22460 613 aa26.5■■□□□ 1.83
SMAD1-214ENST00000514831 GPKOWQ92917 476 aaPredicted RBP eCLIP26.5■■□□□ 1.83
SMAD1-214ENST00000514831 MRPL38Q96DV4 380 aaKnown RBP26.5■■□□□ 1.83
SMAD1-214ENST00000514831 TUT1Q9H6E5 874 aaKnown RBP26.5■■□□□ 1.83
SMAD1-214ENST00000514831 BAZ2BQ9UIF8 2168 aaKnown RBP26.5■■□□□ 1.83
SMAD1-214ENST00000514831 FRMPD4Q14CM0 1322 aa26.49■■□□□ 1.83
SMAD1-214ENST00000514831 GCOM1H8Y6P7 765 aaPredicted RBP26.49■■□□□ 1.83
SMAD1-214ENST00000514831 POLR2MP0CAP2 368 aa26.49■■□□□ 1.83
SMAD1-214ENST00000514831 SMIM10L2AP0DMW4 78 aa26.49■■□□□ 1.83
SMAD1-214ENST00000514831 SMIM10L2BP0DMW5 78 aa26.49■■□□□ 1.83
SMAD1-214ENST00000514831 SLC35G1Q2M3R5 365 aa26.49■■□□□ 1.83
SMAD1-214ENST00000514831 HOMER1Q86YM7 354 aa26.49■■□□□ 1.83
SMAD1-214ENST00000514831 FAM178BQ8IXR5 827 aa26.49■■□□□ 1.83
SMAD1-214ENST00000514831 GADD45GIP1Q8TAE8 222 aaPredicted RBP26.49■■□□□ 1.83
SMAD1-214ENST00000514831 RIOX1Q9H6W3 641 aa26.49■■□□□ 1.83
SMAD1-214ENST00000514831 FAM86C2PA6NEL3 165 aa26.48■■□□□ 1.83
SMAD1-214ENST00000514831 GRM4Q14833 912 aa26.48■■□□□ 1.83
SMAD1-214ENST00000514831 PTPROQ16827 1216 aa26.48■■□□□ 1.83
SMAD1-214ENST00000514831 TIGD5Q53EQ6 642 aa26.48■■□□□ 1.83
SMAD1-214ENST00000514831 CYB5R4Q7L1T6 521 aa26.48■■□□□ 1.83
SMAD1-214ENST00000514831 SEPT8Q92599 483 aa26.48■■□□□ 1.83
SMAD1-214ENST00000514831 TREHO43280 583 aa26.47■■□□□ 1.83
SMAD1-214ENST00000514831 GNPTABQ3T906 1256 aa26.47■■□□□ 1.83
SMAD1-214ENST00000514831 EPC2Q52LR7 807 aa26.47■■□□□ 1.83
SMAD1-214ENST00000514831 FCHSD1Q86WN1 690 aa26.47■■□□□ 1.83
SMAD1-214ENST00000514831 TOP1MTQ969P6 601 aa26.47■■□□□ 1.83
SMAD1-214ENST00000514831 ZFP91Q96JP5 570 aaPredicted RBP26.47■■□□□ 1.83
SMAD1-214ENST00000514831 PIGSQ96S52 555 aa26.47■■□□□ 1.83
SMAD1-214ENST00000514831 IL25Q9H293 177 aa26.47■■□□□ 1.83
SMAD1-214ENST00000514831 ATG2AQ2TAZ0 1938 aa26.47■■□□□ 1.83
SMAD1-214ENST00000514831 NOP56O00567 594 aaKnown RBP26.46■■□□□ 1.83
SMAD1-214ENST00000514831 STAM2O75886 525 aa26.46■■□□□ 1.83
SMAD1-214ENST00000514831 ICAM3P32942 547 aa26.46■■□□□ 1.83
SMAD1-214ENST00000514831 GJD3Q8N144 294 aa26.46■■□□□ 1.83
SMAD1-214ENST00000514831 INPP4AQ96PE3 977 aaPredicted RBP26.46■■□□□ 1.83
SMAD1-214ENST00000514831 YME1L1Q96TA2 773 aa26.46■■□□□ 1.83
SMAD1-214ENST00000514831 USP26Q9BXU7 913 aa26.46■■□□□ 1.83
SMAD1-214ENST00000514831 RNPEPQ9H4A4 650 aa26.46■■□□□ 1.83
SMAD1-214ENST00000514831 CTSHP09668 335 aa26.45■■□□□ 1.82
SMAD1-214ENST00000514831 IL9P15248 144 aa26.45■■□□□ 1.82
SMAD1-214ENST00000514831 PTCRAQ6ISU1 281 aaPredicted RBP26.45■■□□□ 1.82
SMAD1-214ENST00000514831 METTL7BQ6UX53 244 aa26.45■■□□□ 1.82
SMAD1-214ENST00000514831 NEK9Q8TD19 979 aa26.45■■□□□ 1.82
SMAD1-214ENST00000514831 BCAS3Q9H6U6 928 aa26.45■■□□□ 1.82
SMAD1-214ENST00000514831 H3BNC9 293 aa26.44■■□□□ 1.82
SMAD1-214ENST00000514831 CYTH3O43739 400 aa26.44■■□□□ 1.82
SMAD1-214ENST00000514831 IGHDP01880 384 aa26.44■■□□□ 1.82
SMAD1-214ENST00000514831 MRPS9P82933 396 aaKnown RBP26.44■■□□□ 1.82
SMAD1-214ENST00000514831 NEDD9Q14511 834 aa26.44■■□□□ 1.82
SMAD1-214ENST00000514831 PUS10Q3MIT2 529 aaKnown RBP26.44■■□□□ 1.82
SMAD1-214ENST00000514831 OSBPL7Q9BZF2 842 aa26.44■■□□□ 1.82
SMAD1-214ENST00000514831 PNMA6FA0A0J9YX94 578 aa26.43■■□□□ 1.82
SMAD1-214ENST00000514831 LOC101059915A0A1B0GWI6 518 aaPredicted RBP26.43■■□□□ 1.82
SMAD1-214ENST00000514831 GRXCR2A6NFK2 248 aa26.43■■□□□ 1.82
SMAD1-214ENST00000514831 GNAT1P11488 350 aa26.43■■□□□ 1.82
SMAD1-214ENST00000514831 TRDNQ13061 729 aa26.43■■□□□ 1.82
SMAD1-214ENST00000514831 BANK1Q8NDB2 785 aa26.43■■□□□ 1.82
SMAD1-214ENST00000514831 APBB2Q92870 758 aa26.43■■□□□ 1.82
SMAD1-214ENST00000514831 GPR20Q99678 358 aa26.43■■□□□ 1.82
SMAD1-214ENST00000514831 KAT6AQ92794 2004 aa26.43■■□□□ 1.82
SMAD1-214ENST00000514831 SPATA31C2B4DYI2 1134 aa26.42■■□□□ 1.82
SMAD1-214ENST00000514831 FIBPO43427 364 aa26.42■■□□□ 1.82
SMAD1-214ENST00000514831 SEMA3FQ13275 785 aa26.42■■□□□ 1.82
SMAD1-214ENST00000514831 GPM6BQ13491 265 aa26.42■■□□□ 1.82
SMAD1-214ENST00000514831 COL19A1Q14993 1142 aa26.42■■□□□ 1.82
SMAD1-214ENST00000514831 TMEM192Q8IY95 271 aa26.42■■□□□ 1.82
SMAD1-214ENST00000514831 ZNF215Q9UL58 517 aaPredicted RBP26.42■■□□□ 1.82
SMAD1-214ENST00000514831 PRR33A8MZF0 331 aa26.41■■□□□ 1.82
SMAD1-214ENST00000514831 UPP2O95045 317 aa26.41■■□□□ 1.82
SMAD1-214ENST00000514831 SSTR3P32745 418 aaPredicted RBP26.41■■□□□ 1.82
SMAD1-214ENST00000514831 ADAM17P78536 824 aa26.41■■□□□ 1.82
SMAD1-214ENST00000514831 TROAPQ12815 778 aa26.41■■□□□ 1.82
SMAD1-214ENST00000514831 FAM26DQ5JW98 314 aa26.41■■□□□ 1.82
SMAD1-214ENST00000514831 CYFIP1Q7L576 1253 aa26.41■■□□□ 1.82
SMAD1-214ENST00000514831 TRIM50Q86XT4 487 aa26.41■■□□□ 1.82
SMAD1-214ENST00000514831 PABPC5Q96DU9 382 aaKnown RBP26.41■■□□□ 1.82
SMAD1-214ENST00000514831 IFIH1Q9BYX4 1025 aaKnown RBP26.41■■□□□ 1.82
SMAD1-214ENST00000514831 SETD4Q9NVD3 440 aa26.41■■□□□ 1.82
SMAD1-214ENST00000514831 ERICH2A1L162 156 aa26.4■■□□□ 1.82
SMAD1-214ENST00000514831 IFIT3O14879 490 aaKnown RBP26.4■■□□□ 1.82
SMAD1-214ENST00000514831 LMBR1Q8WVP7 490 aa26.4■■□□□ 1.82
SMAD1-214ENST00000514831 NSUN3Q9H649 340 aaKnown RBP26.4■■□□□ 1.82
SMAD1-214ENST00000514831 SENP2Q9HC62 589 aa26.4■■□□□ 1.82
SMAD1-214ENST00000514831 MUC6Q6W4X9 2439 aa26.4■■□□□ 1.82
SMAD1-214ENST00000514831 H3BQ06 376 aaPredicted RBP26.39■■□□□ 1.82
SMAD1-214ENST00000514831 TCEAL5Q5H9L2 206 aa26.39■■□□□ 1.82
SMAD1-214ENST00000514831 CYP21A2P08686 494 aa26.38■■□□□ 1.81
SMAD1-214ENST00000514831 ALADP13716 330 aa26.38■■□□□ 1.81
SMAD1-214ENST00000514831 WTAPQ15007 396 aa26.38■■□□□ 1.81
SMAD1-214ENST00000514831 SENP7Q9BQF6 1050 aa26.38■■□□□ 1.81
SMAD1-214ENST00000514831 U3KPZ7 1027 aaPredicted RBP26.38■■□□□ 1.81
SMAD1-214ENST00000514831 ARHGAP4P98171 946 aa26.37■■□□□ 1.81
SMAD1-214ENST00000514831 SART3Q15020 963 aaKnown RBP26.37■■□□□ 1.81
SMAD1-214ENST00000514831 PCNX4Q63HM2 1172 aa26.37■■□□□ 1.81
SMAD1-214ENST00000514831 RTEL1Q9NZ71 1219 aa26.37■■□□□ 1.81
SMAD1-214ENST00000514831 FAM50BQ9Y247 325 aa26.37■■□□□ 1.81
SMAD1-214ENST00000514831 NRCAMQ92823 1304 aa26.37■■□□□ 1.81
SMAD1-214ENST00000514831 C5orf67F2Z3F1 127 aa26.36■■□□□ 1.81
SMAD1-214ENST00000514831 UTP14CQ5TAP6 766 aaKnown RBP26.36■■□□□ 1.81
SMAD1-214ENST00000514831 XRRA1Q6P2D8 792 aa26.36■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms