RNA–Protein interactions for RNA: ENST00000514344.5

CHD1-211, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 2,955 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-211ENST00000514344 PTPDC1A2A3K4 754 aa3.9□□□□□ -1.79
CHD1-211ENST00000514344 KPNA6O60684 536 aa3.9□□□□□ -1.79
CHD1-211ENST00000514344 ARIH2O95376 493 aa3.9□□□□□ -1.79
CHD1-211ENST00000514344 MMP3P08254 477 aa3.9□□□□□ -1.79
CHD1-211ENST00000514344 CFHP08603 1231 aa3.9□□□□□ -1.79
CHD1-211ENST00000514344 SP9P0CG40 484 aa3.9□□□□□ -1.79
CHD1-211ENST00000514344 RING1Q06587 406 aa3.9□□□□□ -1.79
CHD1-211ENST00000514344 RBL2Q08999 1139 aa3.9□□□□□ -1.79
CHD1-211ENST00000514344 PTK7Q13308 1070 aa3.9□□□□□ -1.79
CHD1-211ENST00000514344 KIAA0753Q2KHM9 967 aa3.9□□□□□ -1.79
CHD1-211ENST00000514344 SYCE2Q6PIF2 218 aa3.9□□□□□ -1.79
CHD1-211ENST00000514344 CERS3Q8IU89 383 aa3.9□□□□□ -1.79
CHD1-211ENST00000514344 CLP1Q92989 425 aaKnown RBP3.9□□□□□ -1.79
CHD1-211ENST00000514344 KIF12Q96FN5 646 aa3.9□□□□□ -1.79
CHD1-211ENST00000514344 CCDC17Q96LX7 622 aa3.9□□□□□ -1.79
CHD1-211ENST00000514344 S1PR5Q9H228 398 aa3.9□□□□□ -1.79
CHD1-211ENST00000514344 GPR108Q9NPR9 543 aa3.9□□□□□ -1.79
CHD1-211ENST00000514344 FANCMQ8IYD8 2048 aa3.89□□□□□ -1.79
CHD1-211ENST00000514344 SDK1Q7Z5N4 2213 aa3.89□□□□□ -1.79
CHD1-211ENST00000514344 LCTP09848 1927 aa3.89□□□□□ -1.79
CHD1-211ENST00000514344 PRR5-ARHGAP8B1AHC4 643 aa3.89□□□□□ -1.79
CHD1-211ENST00000514344 TMEM232C9JQI7 657 aa3.89□□□□□ -1.79
CHD1-211ENST00000514344 PRKAB2O43741 272 aa3.89□□□□□ -1.79
CHD1-211ENST00000514344 SORBS3O60504 671 aa3.89□□□□□ -1.79
CHD1-211ENST00000514344 CALML3P27482 149 aa3.89□□□□□ -1.79
CHD1-211ENST00000514344 ALDH5A1P51649 535 aaPredicted RBP3.89□□□□□ -1.79
CHD1-211ENST00000514344 ARHGAP8P85298 464 aa3.89□□□□□ -1.79
CHD1-211ENST00000514344 BAATQ14032 418 aaPredicted RBP3.89□□□□□ -1.79
CHD1-211ENST00000514344 HIC1Q14526 733 aa3.89□□□□□ -1.79
CHD1-211ENST00000514344 LPAL2Q16609 132 aa3.89□□□□□ -1.79
CHD1-211ENST00000514344 LY6KQ17RY6 165 aa3.89□□□□□ -1.79
CHD1-211ENST00000514344 TRIM71Q2Q1W2 868 aaKnown RBP3.89□□□□□ -1.79
CHD1-211ENST00000514344 DHX30Q7L2E3 1194 aaKnown RBP eCLIP3.89□□□□□ -1.79
CHD1-211ENST00000514344 LCORLQ8N3X6 602 aa3.89□□□□□ -1.79
CHD1-211ENST00000514344 SCFD2Q8WU76 684 aa3.89□□□□□ -1.79
CHD1-211ENST00000514344 MEIS3Q99687 375 aa3.89□□□□□ -1.79
CHD1-211ENST00000514344 CLIP2Q9UDT6 1046 aa3.89□□□□□ -1.79
CHD1-211ENST00000514344 LHX6Q9UPM6 363 aa3.89□□□□□ -1.79
CHD1-211ENST00000514344 MRPL42Q9Y6G3 142 aaKnown RBP3.89□□□□□ -1.79
CHD1-211ENST00000514344 PLXNA4Q9HCM2 1894 aa3.89□□□□□ -1.79
CHD1-211ENST00000514344 USP9XQ93008 2570 aaPredicted RBP3.89□□□□□ -1.79
CHD1-211ENST00000514344 CASTP20810 708 aaKnown RBP3.89□□□□□ -1.79
CHD1-211ENST00000514344 OAZ1P54368 228 aa3.89□□□□□ -1.79
CHD1-211ENST00000514344 PDE4DQ08499 809 aa3.89□□□□□ -1.79
CHD1-211ENST00000514344 SPEM2Q0P670 501 aa3.89□□□□□ -1.79
CHD1-211ENST00000514344 CES5AQ6NT32 575 aa3.89□□□□□ -1.79
CHD1-211ENST00000514344 KANK3Q6NY19 840 aa3.89□□□□□ -1.79
CHD1-211ENST00000514344 LRSAM1Q6UWE0 723 aa3.89□□□□□ -1.79
CHD1-211ENST00000514344 SESTD1Q86VW0 696 aa3.89□□□□□ -1.79
CHD1-211ENST00000514344 C1orf210Q8IVY1 113 aa3.89□□□□□ -1.79
CHD1-211ENST00000514344 TDRD5Q8NAT2 981 aaKnown RBP3.89□□□□□ -1.79
CHD1-211ENST00000514344 ATP8B4Q8TF62 1192 aa3.89□□□□□ -1.79
CHD1-211ENST00000514344 GNL3Q9BVP2 549 aaKnown RBP eCLIP3.89□□□□□ -1.79
CHD1-211ENST00000514344 PLVAPQ9BX97 442 aa3.89□□□□□ -1.79
CHD1-211ENST00000514344 TLR7Q9NYK1 1049 aaKnown RBP3.89□□□□□ -1.79
CHD1-211ENST00000514344 ADD3Q9UEY8 706 aaKnown RBP3.89□□□□□ -1.79
CHD1-211ENST00000514344 CA14Q9ULX7 337 aa3.89□□□□□ -1.79
CHD1-211ENST00000514344 MTMR7Q9Y216 660 aa3.89□□□□□ -1.79
CHD1-211ENST00000514344 HECTD1Q9ULT8 2610 aa3.88□□□□□ -1.79
CHD1-211ENST00000514344 TENM4Q6N022 2769 aa3.88□□□□□ -1.79
CHD1-211ENST00000514344 NFIBO00712 420 aa3.88□□□□□ -1.79
CHD1-211ENST00000514344 NARSO43776 548 aaKnown RBP3.88□□□□□ -1.79
CHD1-211ENST00000514344 GDF9O60383 454 aa3.88□□□□□ -1.79
CHD1-211ENST00000514344 PROS1P07225 676 aa3.88□□□□□ -1.79
CHD1-211ENST00000514344 STAT2P52630 851 aa3.88□□□□□ -1.79
CHD1-211ENST00000514344 ERVFC1P60507 584 aa3.88□□□□□ -1.79
CHD1-211ENST00000514344 APOBRQ0VD83 1088 aa3.88□□□□□ -1.79
CHD1-211ENST00000514344 G3BP1Q13283 466 aaKnown RBP eCLIP3.88□□□□□ -1.79
CHD1-211ENST00000514344 SLFNL1Q499Z3 407 aa3.88□□□□□ -1.79
CHD1-211ENST00000514344 SLC9C2Q5TAH2 1124 aa3.88□□□□□ -1.79
CHD1-211ENST00000514344 PLPP4Q5VZY2 271 aa3.88□□□□□ -1.79
CHD1-211ENST00000514344 ANKRD54Q6NXT1 300 aa3.88□□□□□ -1.79
CHD1-211ENST00000514344 MRPL50Q8N5N7 158 aaKnown RBP3.88□□□□□ -1.79
CHD1-211ENST00000514344 SECISBP2LQ93073 1101 aaKnown RBP3.88□□□□□ -1.79
CHD1-211ENST00000514344 P2RX5Q93086 422 aa3.88□□□□□ -1.79
CHD1-211ENST00000514344 ARMT1Q9H993 441 aa3.88□□□□□ -1.79
CHD1-211ENST00000514344 PARD6AQ9NPB6 346 aa3.88□□□□□ -1.79
CHD1-211ENST00000514344 PLA2G2EQ9NZK7 142 aa3.88□□□□□ -1.79
CHD1-211ENST00000514344 DBR1Q9UK59 544 aaKnown RBP3.88□□□□□ -1.79
CHD1-211ENST00000514344 FEM1BQ9UK73 627 aa3.88□□□□□ -1.79
CHD1-211ENST00000514344 PTPRCP08575 1304 aa3.88□□□□□ -1.79
CHD1-211ENST00000514344 MYH7BA7E2Y1 1941 aa3.88□□□□□ -1.79
CHD1-211ENST00000514344 KRBA1A5PL33 1030 aa3.88□□□□□ -1.79
CHD1-211ENST00000514344 NKRFO15226 690 aaKnown RBP eCLIP3.88□□□□□ -1.79
CHD1-211ENST00000514344 LRRN2O75325 713 aa3.88□□□□□ -1.79
CHD1-211ENST00000514344 SRGAP2BP0DMP2 458 aa3.88□□□□□ -1.79
CHD1-211ENST00000514344 TGM1P22735 817 aa3.88□□□□□ -1.79
CHD1-211ENST00000514344 PSEN2P49810 448 aa3.88□□□□□ -1.79
CHD1-211ENST00000514344 DDX10Q13206 875 aaKnown RBP3.88□□□□□ -1.79
CHD1-211ENST00000514344 MFSD10Q14728 455 aa3.88□□□□□ -1.79
CHD1-211ENST00000514344 DGKDQ16760 1214 aa3.88□□□□□ -1.79
CHD1-211ENST00000514344 DUSP6Q16828 381 aa3.88□□□□□ -1.79
CHD1-211ENST00000514344 TNNI3KQ59H18 835 aa3.88□□□□□ -1.79
CHD1-211ENST00000514344 SPOUT1Q5T280 376 aaKnown RBP3.88□□□□□ -1.79
CHD1-211ENST00000514344 UNQ6494/PRO21346Q6UXR6 183 aa3.88□□□□□ -1.79
CHD1-211ENST00000514344 SLC30A10Q6XR72 485 aa3.88□□□□□ -1.79
CHD1-211ENST00000514344 SEPT14Q6ZU15 432 aa3.88□□□□□ -1.79
CHD1-211ENST00000514344 GPR161Q8N6U8 529 aaKnown RBP3.88□□□□□ -1.79
CHD1-211ENST00000514344 C12orf76Q8N812 135 aaPredicted RBP3.88□□□□□ -1.79
CHD1-211ENST00000514344 FEZF2Q8TBJ5 459 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms