RNA–Protein interactions for RNA: ENST00000514110.5

SNHG4-208, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 1 (best)

Gene SNHG4, Length 679 nt, Biotype retained intron, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-208ENST00000514110 GJB5O95377 273 aa14.09□□□□□ -0.15
SNHG4-208ENST00000514110 SMIM10L2AP0DMW4 78 aa14.09□□□□□ -0.15
SNHG4-208ENST00000514110 SMIM10L2BP0DMW5 78 aa14.09□□□□□ -0.15
SNHG4-208ENST00000514110 HOXC8P31273 242 aa14.09□□□□□ -0.15
SNHG4-208ENST00000514110 KIF5BP33176 963 aa14.09□□□□□ -0.15
SNHG4-208ENST00000514110 THPOP40225 353 aa14.09□□□□□ -0.15
SNHG4-208ENST00000514110 GRB10Q13322 594 aa14.09□□□□□ -0.15
SNHG4-208ENST00000514110 IKBKEQ14164 716 aa14.09□□□□□ -0.15
SNHG4-208ENST00000514110 SKIV2LQ15477 1246 aaKnown RBP14.09□□□□□ -0.15
SNHG4-208ENST00000514110 CASC1Q6TDU7 716 aa14.09□□□□□ -0.15
SNHG4-208ENST00000514110 CMTR1Q8N1G2 835 aaKnown RBP14.09□□□□□ -0.15
SNHG4-208ENST00000514110 SRBD1Q8N5C6 995 aaKnown RBP14.09□□□□□ -0.15
SNHG4-208ENST00000514110 CTCFLQ8NI51 663 aaPredicted RBP14.09□□□□□ -0.15
SNHG4-208ENST00000514110 SMARCC2Q8TAQ2 1214 aa14.09□□□□□ -0.15
SNHG4-208ENST00000514110 ATP6V0A1Q93050 837 aa14.09□□□□□ -0.15
SNHG4-208ENST00000514110 TSPYL2Q9H2G4 693 aaPredicted RBP14.09□□□□□ -0.15
SNHG4-208ENST00000514110 COL4A4P53420 1690 aaPredicted RBP14.09□□□□□ -0.15
SNHG4-208ENST00000514110 TTC28Q96AY4 2481 aa14.09□□□□□ -0.15
SNHG4-208ENST00000514110 RSPH10B2B2RC85 870 aa14.08□□□□□ -0.16
SNHG4-208ENST00000514110 PIK3CDO00329 1044 aa14.08□□□□□ -0.16
SNHG4-208ENST00000514110 NOP56O00567 594 aaKnown RBP14.08□□□□□ -0.16
SNHG4-208ENST00000514110 SLC27A2O14975 620 aa14.08□□□□□ -0.16
SNHG4-208ENST00000514110 TREHO43280 583 aa14.08□□□□□ -0.16
SNHG4-208ENST00000514110 FIBPO43427 364 aa14.08□□□□□ -0.16
SNHG4-208ENST00000514110 LGR5O75473 907 aa14.08□□□□□ -0.16
SNHG4-208ENST00000514110 RSPH10BP0C881 870 aa14.08□□□□□ -0.16
SNHG4-208ENST00000514110 RXRAP19793 462 aa14.08□□□□□ -0.16
SNHG4-208ENST00000514110 SMARCA1P28370 1054 aa14.08□□□□□ -0.16
SNHG4-208ENST00000514110 MCM5P33992 734 aa14.08□□□□□ -0.16
SNHG4-208ENST00000514110 NEDD9Q14511 834 aa14.08□□□□□ -0.16
SNHG4-208ENST00000514110 FAM117BQ6P1L5 589 aa14.08□□□□□ -0.16
SNHG4-208ENST00000514110 METTL7BQ6UX53 244 aa14.08□□□□□ -0.16
SNHG4-208ENST00000514110 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.08□□□□□ -0.16
SNHG4-208ENST00000514110 NFXL1Q6ZNB6 911 aa14.08□□□□□ -0.16
SNHG4-208ENST00000514110 DBF4BQ8NFT6 615 aa14.08□□□□□ -0.16
SNHG4-208ENST00000514110 CUL5Q93034 780 aa14.08□□□□□ -0.16
SNHG4-208ENST00000514110 RAD9AQ99638 391 aa14.08□□□□□ -0.16
SNHG4-208ENST00000514110 GPR20Q99678 358 aa14.08□□□□□ -0.16
SNHG4-208ENST00000514110 LZTS2Q9BRK4 669 aa14.08□□□□□ -0.16
SNHG4-208ENST00000514110 MTA3Q9BTC8 594 aa14.08□□□□□ -0.16
SNHG4-208ENST00000514110 USP26Q9BXU7 913 aa14.08□□□□□ -0.16
SNHG4-208ENST00000514110 OSBPL7Q9BZF2 842 aa14.08□□□□□ -0.16
SNHG4-208ENST00000514110 RNPEPQ9H4A4 650 aa14.08□□□□□ -0.16
SNHG4-208ENST00000514110 CCDC69A6NI79 296 aa14.07□□□□□ -0.16
SNHG4-208ENST00000514110 EFCAB14O75071 495 aa14.07□□□□□ -0.16
SNHG4-208ENST00000514110 BMP1P13497 986 aa14.07□□□□□ -0.16
SNHG4-208ENST00000514110 KCNQ1P51787 676 aa14.07□□□□□ -0.16
SNHG4-208ENST00000514110 MKRN4PQ13434 485 aaPredicted RBP14.07□□□□□ -0.16
SNHG4-208ENST00000514110 NECTIN1Q15223 517 aa14.07□□□□□ -0.16
SNHG4-208ENST00000514110 PCNX4Q63HM2 1172 aa14.07□□□□□ -0.16
SNHG4-208ENST00000514110 CREB3L3Q68CJ9 461 aa14.07□□□□□ -0.16
SNHG4-208ENST00000514110 TRIM50Q86XT4 487 aa14.07□□□□□ -0.16
SNHG4-208ENST00000514110 RAB11FIP4Q86YS3 637 aa14.07□□□□□ -0.16
SNHG4-208ENST00000514110 NECAB3Q96P71 396 aaPredicted RBP14.07□□□□□ -0.16
SNHG4-208ENST00000514110 UHRF1Q96T88 793 aaPredicted RBP14.07□□□□□ -0.16
SNHG4-208ENST00000514110 ESYT1Q9BSJ8 1104 aa14.07□□□□□ -0.16
SNHG4-208ENST00000514110 SEC63Q9UGP8 760 aaKnown RBP14.07□□□□□ -0.16
SNHG4-208ENST00000514110 MTUS1Q9ULD2 1270 aa14.07□□□□□ -0.16
SNHG4-208ENST00000514110 EMSYQ7Z589 1322 aa14.07□□□□□ -0.16
SNHG4-208ENST00000514110 PRRC2BQ5JSZ5 2229 aaKnown RBP14.07□□□□□ -0.16
SNHG4-208ENST00000514110 hCG_1642624A0A1W2PR95 340 aa14.06□□□□□ -0.16
SNHG4-208ENST00000514110 LINC01553A4QN01 128 aa14.06□□□□□ -0.16
SNHG4-208ENST00000514110 LIFRP42702 1097 aa14.06□□□□□ -0.16
SNHG4-208ENST00000514110 GNAQP50148 359 aa14.06□□□□□ -0.16
SNHG4-208ENST00000514110 SP4Q02446 784 aa14.06□□□□□ -0.16
SNHG4-208ENST00000514110 PLEKHG4Q58EX7 1191 aa14.06□□□□□ -0.16
SNHG4-208ENST00000514110 UTP14CQ5TAP6 766 aaKnown RBP14.06□□□□□ -0.16
SNHG4-208ENST00000514110 TMTC2Q8N394 836 aa14.06□□□□□ -0.16
SNHG4-208ENST00000514110 IL27Q8NEV9 243 aa14.06□□□□□ -0.16
SNHG4-208ENST00000514110 GDPD5Q8WTR4 605 aa14.06□□□□□ -0.16
SNHG4-208ENST00000514110 TMEM87BQ96K49 555 aa14.06□□□□□ -0.16
SNHG4-208ENST00000514110 SENP7Q9BQF6 1050 aa14.06□□□□□ -0.16
SNHG4-208ENST00000514110 LRRC2Q9BYS8 371 aa14.06□□□□□ -0.16
SNHG4-208ENST00000514110 SETD4Q9NVD3 440 aa14.06□□□□□ -0.16
SNHG4-208ENST00000514110 ATP9AO75110 1047 aa14.05□□□□□ -0.16
SNHG4-208ENST00000514110 CTSHP09668 335 aa14.05□□□□□ -0.16
SNHG4-208ENST00000514110 ERVK-21P61565 698 aa14.05□□□□□ -0.16
SNHG4-208ENST00000514110 UBE2SQ16763 222 aa14.05□□□□□ -0.16
SNHG4-208ENST00000514110 XRRA1Q6P2D8 792 aa14.05□□□□□ -0.16
SNHG4-208ENST00000514110 SKAP1Q86WV1 359 aa14.05□□□□□ -0.16
SNHG4-208ENST00000514110 CCDC82Q8N4S0 544 aa14.05□□□□□ -0.16
SNHG4-208ENST00000514110 TGS1Q96RS0 853 aaKnown RBP14.05□□□□□ -0.16
SNHG4-208ENST00000514110 PSTPIP2Q9H939 334 aa14.05□□□□□ -0.16
SNHG4-208ENST00000514110 SUGCTQ9HAC7 445 aa14.05□□□□□ -0.16
SNHG4-208ENST00000514110 TCF20Q9UGU0 1960 aaKnown RBP14.05□□□□□ -0.16
SNHG4-208ENST00000514110 MICAL3Q7RTP6 2002 aa14.04□□□□□ -0.16
SNHG4-208ENST00000514110 CALM1P0DP23 149 aa14.04□□□□□ -0.16
SNHG4-208ENST00000514110 CALM2P0DP24 149 aa14.04□□□□□ -0.16
SNHG4-208ENST00000514110 CALM3P0DP25 149 aa14.04□□□□□ -0.16
SNHG4-208ENST00000514110 ADAM17P78536 824 aa14.04□□□□□ -0.16
SNHG4-208ENST00000514110 AAK1Q2M2I8 961 aa14.04□□□□□ -0.16
SNHG4-208ENST00000514110 NLRX1Q86UT6 975 aa14.04□□□□□ -0.16
SNHG4-208ENST00000514110 MYOCDQ8IZQ8 938 aa14.04□□□□□ -0.16
SNHG4-208ENST00000514110 LMBR1Q8WVP7 490 aa14.04□□□□□ -0.16
SNHG4-208ENST00000514110 GPRASP2Q96D09 838 aa14.04□□□□□ -0.16
SNHG4-208ENST00000514110 ANO2Q9NQ90 1003 aa14.04□□□□□ -0.16
SNHG4-208ENST00000514110 ZNF215Q9UL58 517 aaPredicted RBP14.04□□□□□ -0.16
SNHG4-208ENST00000514110 SLC12A7Q9Y666 1083 aa14.04□□□□□ -0.16
SNHG4-208ENST00000514110 SIP14410 1827 aa14.04□□□□□ -0.16
SNHG4-208ENST00000514110 CAND2O75155 1236 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms