RNA–Protein interactions for RNA: ENST00000513148.1

HMGCL-209, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,011 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-209ENST00000513148 SPATA31C2B4DYI2 1134 aa18.69■□□□□ 0.58
HMGCL-209ENST00000513148 ADAMTS4O75173 837 aa18.69■□□□□ 0.58
HMGCL-209ENST00000513148 TDP2O95551 362 aa18.69■□□□□ 0.58
HMGCL-209ENST00000513148 UQCRHP07919 91 aa18.69■□□□□ 0.58
HMGCL-209ENST00000513148 ARP10275 920 aa18.69■□□□□ 0.58
HMGCL-209ENST00000513148 LRRC41Q15345 812 aa18.69■□□□□ 0.58
HMGCL-209ENST00000513148 KCNV1Q6PIU1 500 aa18.69■□□□□ 0.58
HMGCL-209ENST00000513148 NEK8Q86SG6 692 aa18.69■□□□□ 0.58
HMGCL-209ENST00000513148 PLA2G4DQ86XP0 818 aa18.69■□□□□ 0.58
HMGCL-209ENST00000513148 CCDC94Q9BW85 323 aaPredicted RBP18.69■□□□□ 0.58
HMGCL-209ENST00000513148 FOXP1Q9H334 677 aaPredicted RBP18.69■□□□□ 0.58
HMGCL-209ENST00000513148 BCAS3Q9H6U6 928 aa18.69■□□□□ 0.58
HMGCL-209ENST00000513148 KCNH7Q9NS40 1196 aa18.69■□□□□ 0.58
HMGCL-209ENST00000513148 ZKSCAN5Q9Y2L8 839 aa18.69■□□□□ 0.58
HMGCL-209ENST00000513148 NKRFO15226 690 aaKnown RBP eCLIP18.68■□□□□ 0.58
HMGCL-209ENST00000513148 GGPS1O95749 300 aa18.68■□□□□ 0.58
HMGCL-209ENST00000513148 ICAM3P32942 547 aa18.68■□□□□ 0.58
HMGCL-209ENST00000513148 USP11P51784 963 aa18.68■□□□□ 0.58
HMGCL-209ENST00000513148 DHX37Q8IY37 1157 aaKnown RBP18.68■□□□□ 0.58
HMGCL-209ENST00000513148 DIS3LQ8TF46 1054 aaKnown RBP18.68■□□□□ 0.58
HMGCL-209ENST00000513148 DNAH12Q6ZR08 3092 aa18.68■□□□□ 0.58
HMGCL-209ENST00000513148 IGLV3-22A0A075B6J6 115 aa18.67■□□□□ 0.58
HMGCL-209ENST00000513148 MEIS1O00470 390 aa18.67■□□□□ 0.58
HMGCL-209ENST00000513148 CCNT1O60563 726 aaKnown RBP18.67■□□□□ 0.58
HMGCL-209ENST00000513148 ATP9AO75110 1047 aa18.67■□□□□ 0.58
HMGCL-209ENST00000513148 GH1P01241 217 aa18.67■□□□□ 0.58
HMGCL-209ENST00000513148 TGFB3P10600 412 aa18.67■□□□□ 0.58
HMGCL-209ENST00000513148 ATP2B1P20020 1258 aa18.67■□□□□ 0.58
HMGCL-209ENST00000513148 PDCP20941 246 aa18.67■□□□□ 0.58
HMGCL-209ENST00000513148 GJA9P57773 515 aa18.67■□□□□ 0.58
HMGCL-209ENST00000513148 SP4Q02446 784 aa18.67■□□□□ 0.58
HMGCL-209ENST00000513148 GNASQ5JWF2 1037 aa18.67■□□□□ 0.58
HMGCL-209ENST00000513148 RNF180Q86T96 592 aa18.67■□□□□ 0.58
HMGCL-209ENST00000513148 NOSTRINQ8IVI9 506 aa18.67■□□□□ 0.58
HMGCL-209ENST00000513148 CDHR1Q96JP9 859 aa18.67■□□□□ 0.58
HMGCL-209ENST00000513148 GTPBP4Q9BZE4 634 aaKnown RBP18.67■□□□□ 0.58
HMGCL-209ENST00000513148 SYT1P21579 422 aa18.67■□□□□ 0.58
HMGCL-209ENST00000513148 ARHGAP1Q07960 439 aa18.67■□□□□ 0.58
HMGCL-209ENST00000513148 FSCN1Q16658 493 aaKnown RBP18.67■□□□□ 0.58
HMGCL-209ENST00000513148 CYFIP1Q7L576 1253 aa18.67■□□□□ 0.58
HMGCL-209ENST00000513148 ARRDC4Q8NCT1 418 aa18.67■□□□□ 0.58
HMGCL-209ENST00000513148 UPF3AQ9H1J1 476 aaKnown RBP18.67■□□□□ 0.58
HMGCL-209ENST00000513148 MLXIPQ9HAP2 919 aa18.67■□□□□ 0.58
HMGCL-209ENST00000513148 KBTBD13C9JR72 458 aa18.66■□□□□ 0.58
HMGCL-209ENST00000513148 KIF20AO95235 890 aa18.66■□□□□ 0.58
HMGCL-209ENST00000513148 CIITAP33076 1130 aa18.66■□□□□ 0.58
HMGCL-209ENST00000513148 Q9Y3F1 56 aa18.66■□□□□ 0.58
HMGCL-209ENST00000513148 CTAGE5O15320 804 aa18.66■□□□□ 0.58
HMGCL-209ENST00000513148 FARP2O94887 1054 aaPredicted RBP18.66■□□□□ 0.58
HMGCL-209ENST00000513148 KCNA2P16389 499 aa18.66■□□□□ 0.58
HMGCL-209ENST00000513148 SETQ01105 290 aaPredicted RBP18.66■□□□□ 0.58
HMGCL-209ENST00000513148 NEDD9Q14511 834 aa18.66■□□□□ 0.58
HMGCL-209ENST00000513148 CELF3Q5SZQ8 465 aaKnown RBP18.66■□□□□ 0.58
HMGCL-209ENST00000513148 NIPA1Q7RTP0 329 aa18.66■□□□□ 0.58
HMGCL-209ENST00000513148 AFG1LQ8WV93 481 aa18.66■□□□□ 0.58
HMGCL-209ENST00000513148 LENG9Q96B70 501 aa18.66■□□□□ 0.58
HMGCL-209ENST00000513148 SPATA33Q96N06 139 aa18.66■□□□□ 0.58
HMGCL-209ENST00000513148 AGO4Q9HCK5 861 aaKnown RBP18.66■□□□□ 0.58
HMGCL-209ENST00000513148 DDX25Q9UHL0 483 aaKnown RBP18.66■□□□□ 0.58
HMGCL-209ENST00000513148 DDX39AO00148 427 aaKnown RBP18.65■□□□□ 0.58
HMGCL-209ENST00000513148 DNM1LO00429 736 aa18.65■□□□□ 0.58
HMGCL-209ENST00000513148 WNT7AO00755 349 aa18.65■□□□□ 0.58
HMGCL-209ENST00000513148 SLC37A4O43826 429 aa18.65■□□□□ 0.58
HMGCL-209ENST00000513148 U2AF2P26368 475 aaKnown RBP eCLIP18.65■□□□□ 0.58
HMGCL-209ENST00000513148 MNX1P50219 401 aaPredicted RBP18.65■□□□□ 0.58
HMGCL-209ENST00000513148 KCNA10Q16322 511 aa18.65■□□□□ 0.58
HMGCL-209ENST00000513148 MYSM1Q5VVJ2 828 aa18.65■□□□□ 0.58
HMGCL-209ENST00000513148 FERMT3Q86UX7 667 aa18.65■□□□□ 0.58
HMGCL-209ENST00000513148 GJA10Q969M2 543 aa18.65■□□□□ 0.58
HMGCL-209ENST00000513148 ZNF577Q9BSK1 485 aa18.65■□□□□ 0.58
HMGCL-209ENST00000513148 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.65■□□□□ 0.58
HMGCL-209ENST00000513148 MAFGO15525 162 aa18.64■□□□□ 0.58
HMGCL-209ENST00000513148 CPT1AP50416 773 aa18.64■□□□□ 0.58
HMGCL-209ENST00000513148 ITGB3BPQ13352 177 aaPredicted RBP18.64■□□□□ 0.58
HMGCL-209ENST00000513148 HSDL1Q3SXM5 330 aa18.64■□□□□ 0.58
HMGCL-209ENST00000513148 KLHDC9Q8NEP7 349 aa18.64■□□□□ 0.58
HMGCL-209ENST00000513148 FERMT2Q96AC1 680 aa18.64■□□□□ 0.58
HMGCL-209ENST00000513148 PAWRQ96IZ0 340 aaKnown RBP18.64■□□□□ 0.58
HMGCL-209ENST00000513148 SENP7Q9BQF6 1050 aa18.64■□□□□ 0.58
HMGCL-209ENST00000513148 TELO2Q9Y4R8 837 aa18.64■□□□□ 0.58
HMGCL-209ENST00000513148 IPO5O00410 1097 aaKnown RBP18.64■□□□□ 0.57
HMGCL-209ENST00000513148 ASGR1P07306 291 aa18.64■□□□□ 0.57
HMGCL-209ENST00000513148 LAMC2Q13753 1193 aa18.64■□□□□ 0.57
HMGCL-209ENST00000513148 METTL7BQ6UX53 244 aa18.64■□□□□ 0.57
HMGCL-209ENST00000513148 ANKLE1Q8NAG6 615 aa18.64■□□□□ 0.57
HMGCL-209ENST00000513148 CCDC39Q9UFE4 941 aa18.64■□□□□ 0.57
HMGCL-209ENST00000513148 CYP3A7-CYP3A51PA0A087WV96 503 aa18.63■□□□□ 0.57
HMGCL-209ENST00000513148 NOP56O00567 594 aaKnown RBP18.63■□□□□ 0.57
HMGCL-209ENST00000513148 MSH4O15457 936 aa18.63■□□□□ 0.57
HMGCL-209ENST00000513148 MMP3P08254 477 aa18.63■□□□□ 0.57
HMGCL-209ENST00000513148 CYP3A7P24462 503 aa18.63■□□□□ 0.57
HMGCL-209ENST00000513148 CST5P28325 142 aaPredicted RBP18.63■□□□□ 0.57
HMGCL-209ENST00000513148 Q4G0T1 1027 aa18.63■□□□□ 0.57
HMGCL-209ENST00000513148 BRDTQ58F21 947 aaPredicted RBP18.63■□□□□ 0.57
HMGCL-209ENST00000513148 SDF4Q9BRK5 362 aa18.63■□□□□ 0.57
HMGCL-209ENST00000513148 STX6O43752 255 aa18.62■□□□□ 0.57
HMGCL-209ENST00000513148 MYL3P08590 195 aa18.62■□□□□ 0.57
HMGCL-209ENST00000513148 PPP4R3AQ6IN85 833 aa18.62■□□□□ 0.57
HMGCL-209ENST00000513148 CCSAPQ6IQ19 270 aaPredicted RBP18.62■□□□□ 0.57
HMGCL-209ENST00000513148 MOXD1Q6UVY6 613 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms