RNA–Protein interactions for RNA: ENST00000513009.5

SDHC-208, Transcript of succinate dehydrogenase complex subunit C, humanhuman

TSL 1 (best) BASIC

Gene SDHC, Length 369 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHC-208ENST00000513009 RETREG3Q86VR2 466 aa9.7□□□□□ -0.86
SDHC-208ENST00000513009 IQCA1Q86XH1 822 aa9.7□□□□□ -0.86
SDHC-208ENST00000513009 HERC6Q8IVU3 1022 aa9.7□□□□□ -0.86
SDHC-208ENST00000513009 ESR2Q92731 530 aa9.7□□□□□ -0.86
SDHC-208ENST00000513009 MTG1Q9BT17 334 aaPredicted RBP9.7□□□□□ -0.86
SDHC-208ENST00000513009 DSCC1Q9BVC3 393 aa9.7□□□□□ -0.86
SDHC-208ENST00000513009 WDR11Q9BZH6 1224 aa9.7□□□□□ -0.86
SDHC-208ENST00000513009 KRT23Q9C075 422 aa9.7□□□□□ -0.86
SDHC-208ENST00000513009 CNNM2Q9H8M5 875 aa9.7□□□□□ -0.86
SDHC-208ENST00000513009 SLC24A3Q9HC58 644 aa9.7□□□□□ -0.86
SDHC-208ENST00000513009 ANAPC4Q9UJX5 808 aa9.7□□□□□ -0.86
SDHC-208ENST00000513009 PRR12Q9ULL5 1215 aa9.7□□□□□ -0.86
SDHC-208ENST00000513009 STX8Q9UNK0 236 aa9.7□□□□□ -0.86
SDHC-208ENST00000513009 RAD50Q92878 1312 aa9.7□□□□□ -0.86
SDHC-208ENST00000513009 TRIP12Q14669 1992 aaPredicted RBP9.7□□□□□ -0.86
SDHC-208ENST00000513009 ERICH2A1L162 156 aa9.69□□□□□ -0.86
SDHC-208ENST00000513009 NKRFO15226 690 aaKnown RBP eCLIP9.69□□□□□ -0.86
SDHC-208ENST00000513009 ZBTB24O43167 697 aaPredicted RBP9.69□□□□□ -0.86
SDHC-208ENST00000513009 KPNA6O60684 536 aa9.69□□□□□ -0.86
SDHC-208ENST00000513009 LPXNO60711 386 aa9.69□□□□□ -0.86
SDHC-208ENST00000513009 ARHGEF15O94989 841 aa9.69□□□□□ -0.86
SDHC-208ENST00000513009 ZMYM6O95789 1325 aa9.69□□□□□ -0.86
SDHC-208ENST00000513009 JUNDP17535 347 aa9.69□□□□□ -0.86
SDHC-208ENST00000513009 ALDH5A1P51649 535 aaPredicted RBP9.69□□□□□ -0.86
SDHC-208ENST00000513009 CTDSPL2Q05D32 466 aa9.69□□□□□ -0.86
SDHC-208ENST00000513009 GRB10Q13322 594 aa9.69□□□□□ -0.86
SDHC-208ENST00000513009 BRDTQ58F21 947 aaPredicted RBP9.69□□□□□ -0.86
SDHC-208ENST00000513009 KRT40Q6A162 431 aa9.69□□□□□ -0.86
SDHC-208ENST00000513009 NSMFQ6X4W1 530 aa9.69□□□□□ -0.86
SDHC-208ENST00000513009 KCTD1Q719H9 257 aa9.69□□□□□ -0.86
SDHC-208ENST00000513009 RETREG2Q8NC44 543 aa9.69□□□□□ -0.86
SDHC-208ENST00000513009 ARNTL2Q8WYA1 636 aa9.69□□□□□ -0.86
SDHC-208ENST00000513009 CERS4Q9HA82 394 aa9.69□□□□□ -0.86
SDHC-208ENST00000513009 C11orf16Q9NQ32 467 aa9.69□□□□□ -0.86
SDHC-208ENST00000513009 LMCD1Q9NZU5 365 aa9.69□□□□□ -0.86
SDHC-208ENST00000513009 CCPG1Q9ULG6 757 aa9.69□□□□□ -0.86
SDHC-208ENST00000513009 A6NJR5 290 aa9.68□□□□□ -0.86
SDHC-208ENST00000513009 ORC4O43929 436 aa9.68□□□□□ -0.86
SDHC-208ENST00000513009 MYL3P08590 195 aa9.68□□□□□ -0.86
SDHC-208ENST00000513009 NOVP48745 357 aa9.68□□□□□ -0.86
SDHC-208ENST00000513009 PDE4DQ08499 809 aa9.68□□□□□ -0.86
SDHC-208ENST00000513009 BFSP2Q13515 415 aa9.68□□□□□ -0.86
SDHC-208ENST00000513009 BAATQ14032 418 aaPredicted RBP9.68□□□□□ -0.86
SDHC-208ENST00000513009 NBPF20Q3BBV1 942 aa9.68□□□□□ -0.86
SDHC-208ENST00000513009 VPS53Q5VIR6 699 aa9.68□□□□□ -0.86
SDHC-208ENST00000513009 BTNL9Q6UXG8 535 aa9.68□□□□□ -0.86
SDHC-208ENST00000513009 OR6J1Q8NGC5 347 aa9.68□□□□□ -0.86
SDHC-208ENST00000513009 TTC14Q96N46 770 aa9.68□□□□□ -0.86
SDHC-208ENST00000513009 PURBQ96QR8 312 aaKnown RBP9.68□□□□□ -0.86
SDHC-208ENST00000513009 RANBP17Q9H2T7 1088 aaKnown RBP9.68□□□□□ -0.86
SDHC-208ENST00000513009 IL17RBQ9NRM6 502 aa9.68□□□□□ -0.86
SDHC-208ENST00000513009 TOR4AQ9NXH8 423 aa9.68□□□□□ -0.86
SDHC-208ENST00000513009 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.68□□□□□ -0.86
SDHC-208ENST00000513009 TRANK1O15050 2925 aa9.68□□□□□ -0.86
SDHC-208ENST00000513009 SIP14410 1827 aa9.68□□□□□ -0.86
SDHC-208ENST00000513009 BRWD1Q9NSI6 2320 aa9.67□□□□□ -0.86
SDHC-208ENST00000513009 PI4K2BG5E9Z4 385 aa9.67□□□□□ -0.86
SDHC-208ENST00000513009 NFIBO00712 420 aa9.67□□□□□ -0.86
SDHC-208ENST00000513009 SNAP25P60880 206 aa9.67□□□□□ -0.86
SDHC-208ENST00000513009 HAND2P61296 217 aa9.67□□□□□ -0.86
SDHC-208ENST00000513009 SART3Q15020 963 aaKnown RBP9.67□□□□□ -0.86
SDHC-208ENST00000513009 PPP2R5BQ15173 497 aa9.67□□□□□ -0.86
SDHC-208ENST00000513009 PKDCCQ504Y2 493 aa9.67□□□□□ -0.86
SDHC-208ENST00000513009 FAM47CQ5HY64 1035 aa9.67□□□□□ -0.86
SDHC-208ENST00000513009 RALYLQ86SE5 291 aaKnown RBP9.67□□□□□ -0.86
SDHC-208ENST00000513009 SCFD2Q8WU76 684 aa9.67□□□□□ -0.86
SDHC-208ENST00000513009 DCAF4Q8WV16 495 aa9.67□□□□□ -0.86
SDHC-208ENST00000513009 UBAC1Q9BSL1 405 aa9.67□□□□□ -0.86
SDHC-208ENST00000513009 FTOQ9C0B1 505 aaKnown RBP eCLIP9.67□□□□□ -0.86
SDHC-208ENST00000513009 PPP4R2Q9NY27 417 aa9.67□□□□□ -0.86
SDHC-208ENST00000513009 PNMA2Q9UL42 364 aa9.67□□□□□ -0.86
SDHC-208ENST00000513009 REV3LO60673 3130 aa9.66□□□□□ -0.86
SDHC-208ENST00000513009 EIF5BO60841 1220 aaKnown RBP9.66□□□□□ -0.86
SDHC-208ENST00000513009 PARNO95453 639 aaKnown RBP9.66□□□□□ -0.86
SDHC-208ENST00000513009 TOP1P11387 765 aaKnown RBP9.66□□□□□ -0.86
SDHC-208ENST00000513009 EDNRBP24530 442 aa9.66□□□□□ -0.86
SDHC-208ENST00000513009 CHMLP26374 656 aa9.66□□□□□ -0.86
SDHC-208ENST00000513009 KCNJ6P48051 423 aa9.66□□□□□ -0.86
SDHC-208ENST00000513009 WDR5P61964 334 aaKnown RBP9.66□□□□□ -0.86
SDHC-208ENST00000513009 RBL2Q08999 1139 aa9.66□□□□□ -0.86
SDHC-208ENST00000513009 CCDC96Q2M329 555 aa9.66□□□□□ -0.86
SDHC-208ENST00000513009 RNF20Q5VTR2 975 aa9.66□□□□□ -0.86
SDHC-208ENST00000513009 RASGRP2Q7LDG7 609 aa9.66□□□□□ -0.86
SDHC-208ENST00000513009 ZNF589Q86UQ0 364 aaPredicted RBP9.66□□□□□ -0.86
SDHC-208ENST00000513009 SESTD1Q86VW0 696 aa9.66□□□□□ -0.86
SDHC-208ENST00000513009 CCDC155Q8N6L0 562 aa9.66□□□□□ -0.86
SDHC-208ENST00000513009 DNERQ8NFT8 737 aa9.66□□□□□ -0.86
SDHC-208ENST00000513009 CAGE1Q8TC20 777 aa9.66□□□□□ -0.86
SDHC-208ENST00000513009 AFAP1L1Q8TED9 768 aa9.66□□□□□ -0.86
SDHC-208ENST00000513009 CHMP4CQ96CF2 233 aa9.66□□□□□ -0.86
SDHC-208ENST00000513009 MPHOSPH6Q99547 160 aaKnown RBP9.66□□□□□ -0.86
SDHC-208ENST00000513009 KAT14Q9H8E8 782 aa9.66□□□□□ -0.86
SDHC-208ENST00000513009 TCP11L1Q9NUJ3 509 aa9.66□□□□□ -0.86
SDHC-208ENST00000513009 MTMR7Q9Y216 660 aa9.66□□□□□ -0.86
SDHC-208ENST00000513009 NOD1Q9Y239 953 aa9.66□□□□□ -0.86
SDHC-208ENST00000513009 KIAA1217Q5T5P2 1943 aa9.65□□□□□ -0.86
SDHC-208ENST00000513009 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.65□□□□□ -0.86
SDHC-208ENST00000513009 PTPDC1A2A3K4 754 aa9.65□□□□□ -0.86
SDHC-208ENST00000513009 LCHNA4D1U4 455 aa9.65□□□□□ -0.86
SDHC-208ENST00000513009 FAM187AA6NFU0 413 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms