RNA–Protein interactions for RNA: ENST00000511001.2

CHFR-208, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 892 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-208ENST00000511001 GPR20Q99678 358 aa13.84□□□□□ -0.19
CHFR-208ENST00000511001 SENP7Q9BQF6 1050 aa13.84□□□□□ -0.19
CHFR-208ENST00000511001 PCDHA6Q9UN73 950 aa13.84□□□□□ -0.19
CHFR-208ENST00000511001 NOD1Q9Y239 953 aa13.84□□□□□ -0.19
CHFR-208ENST00000511001 PCDHA8Q9Y5H6 950 aa13.84□□□□□ -0.19
CHFR-208ENST00000511001 UBIAD1Q9Y5Z9 338 aa13.84□□□□□ -0.19
CHFR-208ENST00000511001 MICAL3Q7RTP6 2002 aa13.84□□□□□ -0.19
CHFR-208ENST00000511001 WDR81Q562E7 1941 aa13.84□□□□□ -0.19
CHFR-208ENST00000511001 NID2Q14112 1375 aa13.83□□□□□ -0.19
CHFR-208ENST00000511001 STXBP3O00186 592 aa13.83□□□□□ -0.2
CHFR-208ENST00000511001 ATP9AO75110 1047 aa13.83□□□□□ -0.2
CHFR-208ENST00000511001 NEFLP07196 543 aa13.83□□□□□ -0.2
CHFR-208ENST00000511001 PFKMP08237 780 aa13.83□□□□□ -0.2
CHFR-208ENST00000511001 KCNA2P16389 499 aa13.83□□□□□ -0.2
CHFR-208ENST00000511001 ITGB5P18084 799 aa13.83□□□□□ -0.2
CHFR-208ENST00000511001 RPS6KB1P23443 525 aa13.83□□□□□ -0.2
CHFR-208ENST00000511001 HOXC8P31273 242 aa13.83□□□□□ -0.2
CHFR-208ENST00000511001 GRIN2CQ14957 1233 aa13.83□□□□□ -0.2
CHFR-208ENST00000511001 TRAF7Q6Q0C0 670 aa13.83□□□□□ -0.2
CHFR-208ENST00000511001 C7orf31Q8N865 590 aa13.83□□□□□ -0.2
CHFR-208ENST00000511001 RETREG2Q8NC44 543 aa13.83□□□□□ -0.2
CHFR-208ENST00000511001 BRF1Q92994 677 aa13.83□□□□□ -0.2
CHFR-208ENST00000511001 GPRASP2Q96D09 838 aa13.83□□□□□ -0.2
CHFR-208ENST00000511001 MTIF3Q9H2K0 278 aaKnown RBP13.83□□□□□ -0.2
CHFR-208ENST00000511001 ZNF576Q9H609 170 aa13.83□□□□□ -0.2
CHFR-208ENST00000511001 YBX2Q9Y2T7 364 aaKnown RBP13.83□□□□□ -0.2
CHFR-208ENST00000511001 V9GY48 417 aaPredicted RBP13.83□□□□□ -0.2
CHFR-208ENST00000511001 CHD9Q3L8U1 2897 aa13.83□□□□□ -0.2
CHFR-208ENST00000511001 H3BRB1 525 aa13.82□□□□□ -0.2
CHFR-208ENST00000511001 REC8O95072 547 aa13.82□□□□□ -0.2
CHFR-208ENST00000511001 CKBP12277 381 aa13.82□□□□□ -0.2
CHFR-208ENST00000511001 NAPAP54920 295 aa13.82□□□□□ -0.2
CHFR-208ENST00000511001 PTK7Q13308 1070 aa13.82□□□□□ -0.2
CHFR-208ENST00000511001 PPP1R18Q6NYC8 613 aa13.82□□□□□ -0.2
CHFR-208ENST00000511001 NLRX1Q86UT6 975 aa13.82□□□□□ -0.2
CHFR-208ENST00000511001 MAFAQ8NHW3 353 aaPredicted RBP13.82□□□□□ -0.2
CHFR-208ENST00000511001 AFAP1L1Q8TED9 768 aa13.82□□□□□ -0.2
CHFR-208ENST00000511001 PGBD1Q96JS3 809 aa13.82□□□□□ -0.2
CHFR-208ENST00000511001 TUT1Q9H6E5 874 aaKnown RBP13.82□□□□□ -0.2
CHFR-208ENST00000511001 RIC8AQ9NPQ8 531 aa13.82□□□□□ -0.2
CHFR-208ENST00000511001 BARHL2Q9NY43 387 aa13.82□□□□□ -0.2
CHFR-208ENST00000511001 SLC4A7Q9Y6M7 1214 aa13.82□□□□□ -0.2
CHFR-208ENST00000511001 SIP14410 1827 aa13.82□□□□□ -0.2
CHFR-208ENST00000511001 SPDYE3A6NKU9 549 aa13.81□□□□□ -0.2
CHFR-208ENST00000511001 hCG_1984214I3L0E3 225 aa13.81□□□□□ -0.2
CHFR-208ENST00000511001 NOP56O00567 594 aaKnown RBP13.81□□□□□ -0.2
CHFR-208ENST00000511001 EPB41L2O43491 1005 aaKnown RBP13.81□□□□□ -0.2
CHFR-208ENST00000511001 NBNO60934 754 aa13.81□□□□□ -0.2
CHFR-208ENST00000511001 SELPP16109 830 aa13.81□□□□□ -0.2
CHFR-208ENST00000511001 CLK2P49760 499 aaKnown RBP13.81□□□□□ -0.2
CHFR-208ENST00000511001 METAP2P50579 478 aaKnown RBP eCLIP13.81□□□□□ -0.2
CHFR-208ENST00000511001 RABGGTBP53611 331 aa13.81□□□□□ -0.2
CHFR-208ENST00000511001 TCTN1Q2MV58 587 aa13.81□□□□□ -0.2
CHFR-208ENST00000511001 LRRC8DQ7L1W4 858 aa13.81□□□□□ -0.2
CHFR-208ENST00000511001 TRIM50Q86XT4 487 aa13.81□□□□□ -0.2
CHFR-208ENST00000511001 CCDC155Q8N6L0 562 aa13.81□□□□□ -0.2
CHFR-208ENST00000511001 ZNF713Q8N859 430 aaPredicted RBP13.81□□□□□ -0.2
CHFR-208ENST00000511001 USP26Q9BXU7 913 aa13.81□□□□□ -0.2
CHFR-208ENST00000511001 ANO3Q9BYT9 981 aa13.81□□□□□ -0.2
CHFR-208ENST00000511001 NKX2-4Q9H2Z4 354 aa13.81□□□□□ -0.2
CHFR-208ENST00000511001 JADE2Q9NQC1 790 aa13.81□□□□□ -0.2
CHFR-208ENST00000511001 PPP4R2Q9NY27 417 aa13.81□□□□□ -0.2
CHFR-208ENST00000511001 NAP1L2Q9ULW6 460 aaPredicted RBP13.81□□□□□ -0.2
CHFR-208ENST00000511001 LOXHD1Q8IVV2 1947 aa13.81□□□□□ -0.2
CHFR-208ENST00000511001 GSTTP1A0A1W2PQM5 241 aa13.8□□□□□ -0.2
CHFR-208ENST00000511001 SMCO2A6NFE2 343 aa13.8□□□□□ -0.2
CHFR-208ENST00000511001 ZBBXA8MT70 800 aa13.8□□□□□ -0.2
CHFR-208ENST00000511001 ADAMTS3O15072 1205 aa13.8□□□□□ -0.2
CHFR-208ENST00000511001 CXCL10P02778 98 aa13.8□□□□□ -0.2
CHFR-208ENST00000511001 SMIM10L2AP0DMW4 78 aa13.8□□□□□ -0.2
CHFR-208ENST00000511001 SMIM10L2BP0DMW5 78 aa13.8□□□□□ -0.2
CHFR-208ENST00000511001 MYOGP15173 224 aa13.8□□□□□ -0.2
CHFR-208ENST00000511001 EVCP57679 992 aa13.8□□□□□ -0.2
CHFR-208ENST00000511001 FGD1P98174 961 aa13.8□□□□□ -0.2
CHFR-208ENST00000511001 SP4Q02446 784 aa13.8□□□□□ -0.2
CHFR-208ENST00000511001 MBTPS1Q14703 1052 aa13.8□□□□□ -0.2
CHFR-208ENST00000511001 RAB30Q15771 203 aa13.8□□□□□ -0.2
CHFR-208ENST00000511001 NTRK3Q16288 839 aa13.8□□□□□ -0.2
CHFR-208ENST00000511001 PKN1Q16512 942 aa13.8□□□□□ -0.2
CHFR-208ENST00000511001 PFKFB3Q16875 520 aaPredicted RBP13.8□□□□□ -0.2
CHFR-208ENST00000511001 ZNF618Q5T7W0 954 aa13.8□□□□□ -0.2
CHFR-208ENST00000511001 SERINC5Q86VE9 423 aa13.8□□□□□ -0.2
CHFR-208ENST00000511001 TEX2Q8IWB9 1127 aa13.8□□□□□ -0.2
CHFR-208ENST00000511001 CYP2W1Q8TAV3 490 aa13.8□□□□□ -0.2
CHFR-208ENST00000511001 RNPEPQ9H4A4 650 aa13.8□□□□□ -0.2
CHFR-208ENST00000511001 TMEM260Q9NX78 707 aa13.8□□□□□ -0.2
CHFR-208ENST00000511001 MSRAQ9UJ68 235 aa13.8□□□□□ -0.2
CHFR-208ENST00000511001 MYH9P35579 1960 aaKnown RBP13.8□□□□□ -0.2
CHFR-208ENST00000511001 CHD7Q9P2D1 2997 aa13.79□□□□□ -0.2
CHFR-208ENST00000511001 C17orf102A2RUQ5 167 aa13.79□□□□□ -0.2
CHFR-208ENST00000511001 TREHO43280 583 aa13.79□□□□□ -0.2
CHFR-208ENST00000511001 PRPF3O43395 683 aaKnown RBP13.79□□□□□ -0.2
CHFR-208ENST00000511001 ACTN1P12814 892 aa13.79□□□□□ -0.2
CHFR-208ENST00000511001 SCG2P13521 617 aa13.79□□□□□ -0.2
CHFR-208ENST00000511001 ATP2A2P16615 1042 aaKnown RBP13.79□□□□□ -0.2
CHFR-208ENST00000511001 PSMA5P28066 241 aa13.79□□□□□ -0.2
CHFR-208ENST00000511001 ADCY7P51828 1080 aa13.79□□□□□ -0.2
CHFR-208ENST00000511001 ADAM17P78536 824 aa13.79□□□□□ -0.2
CHFR-208ENST00000511001 MTMR1Q13613 665 aa13.79□□□□□ -0.2
CHFR-208ENST00000511001 TOB2Q14106 344 aaPredicted RBP13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms