RNA–Protein interactions for RNA: ENST00000509177.1

TUSC3-208, Transcript of tumor suppressor candidate 3, humanhuman

TSL 2

Gene TUSC3, Length 493 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUSC3-208ENST00000509177 NOP56O00567 594 aaKnown RBP12.47□□□□□ -0.41
TUSC3-208ENST00000509177 ZBTB43O43298 467 aa12.47□□□□□ -0.41
TUSC3-208ENST00000509177 LPXNO60711 386 aa12.47□□□□□ -0.41
TUSC3-208ENST00000509177 IQCF3P0C7M6 154 aa12.47□□□□□ -0.41
TUSC3-208ENST00000509177 ACTN1P12814 892 aa12.47□□□□□ -0.41
TUSC3-208ENST00000509177 RFC2P35250 354 aa12.47□□□□□ -0.41
TUSC3-208ENST00000509177 EXOSC10Q01780 885 aaKnown RBP12.47□□□□□ -0.41
TUSC3-208ENST00000509177 CACNB1Q02641 598 aaPredicted RBP12.47□□□□□ -0.41
TUSC3-208ENST00000509177 BFSP2Q13515 415 aa12.47□□□□□ -0.41
TUSC3-208ENST00000509177 PTGISQ16647 500 aa12.47□□□□□ -0.41
TUSC3-208ENST00000509177 RTN1Q16799 776 aa12.47□□□□□ -0.41
TUSC3-208ENST00000509177 TSGA10IPQ3SY00 556 aa12.47□□□□□ -0.41
TUSC3-208ENST00000509177 CELF3Q5SZQ8 465 aaKnown RBP12.47□□□□□ -0.41
TUSC3-208ENST00000509177 MYSM1Q5VVJ2 828 aa12.47□□□□□ -0.41
TUSC3-208ENST00000509177 TMTC3Q6ZXV5 915 aa12.47□□□□□ -0.41
TUSC3-208ENST00000509177 PPTC7Q8NI37 304 aa12.47□□□□□ -0.41
TUSC3-208ENST00000509177 KHSRPQ92945 711 aaKnown RBP eCLIP12.47□□□□□ -0.417e-7■■■■□ 19.6
TUSC3-208ENST00000509177 EMID1Q96A84 441 aaPredicted RBP12.47□□□□□ -0.41
TUSC3-208ENST00000509177 KATNAL1Q9BW62 490 aa12.47□□□□□ -0.41
TUSC3-208ENST00000509177 RBM28Q9NW13 759 aaKnown RBP12.47□□□□□ -0.41
TUSC3-208ENST00000509177 RTEL1Q9NZ71 1219 aa12.47□□□□□ -0.41
TUSC3-208ENST00000509177 PIEZO1Q92508 2521 aa12.46□□□□□ -0.41
TUSC3-208ENST00000509177 KLF18A0A0U1RQI7 1052 aa12.46□□□□□ -0.41
TUSC3-208ENST00000509177 SPDYE3A6NKU9 549 aa12.46□□□□□ -0.41
TUSC3-208ENST00000509177 GOLGA8AA7E2F4 631 aa12.46□□□□□ -0.41
TUSC3-208ENST00000509177 GOLGA8BA8MQT2 603 aa12.46□□□□□ -0.41
TUSC3-208ENST00000509177 PPFIA4O75335 1185 aa12.46□□□□□ -0.41
TUSC3-208ENST00000509177 STAM2O75886 525 aa12.46□□□□□ -0.41
TUSC3-208ENST00000509177 RGS20O76081 388 aa12.46□□□□□ -0.41
TUSC3-208ENST00000509177 REC8O95072 547 aa12.46□□□□□ -0.41
TUSC3-208ENST00000509177 ZNF286BP0CG31 522 aa12.46□□□□□ -0.41
TUSC3-208ENST00000509177 PSEN2P49810 448 aa12.46□□□□□ -0.41
TUSC3-208ENST00000509177 GRB10Q13322 594 aa12.46□□□□□ -0.41
TUSC3-208ENST00000509177 MFSD10Q14728 455 aa12.46□□□□□ -0.41
TUSC3-208ENST00000509177 ADCK5Q3MIX3 580 aa12.46□□□□□ -0.41
TUSC3-208ENST00000509177 APOA5Q6Q788 366 aa12.46□□□□□ -0.41
TUSC3-208ENST00000509177 CCDC155Q8N6L0 562 aa12.46□□□□□ -0.41
TUSC3-208ENST00000509177 HLA-CQ95604 372 aa12.46□□□□□ -0.41
TUSC3-208ENST00000509177 JAKMIP1Q96N16 626 aaKnown RBP12.46□□□□□ -0.41
TUSC3-208ENST00000509177 ARIH1Q9Y4X5 557 aaPredicted RBP12.46□□□□□ -0.41
TUSC3-208ENST00000509177 TANC1Q9C0D5 1861 aa12.46□□□□□ -0.42
TUSC3-208ENST00000509177 PIK3CDO00329 1044 aa12.45□□□□□ -0.42
TUSC3-208ENST00000509177 UBA1P22314 1058 aaKnown RBP12.45□□□□□ -0.42
TUSC3-208ENST00000509177 NAPAP54920 295 aa12.45□□□□□ -0.42
TUSC3-208ENST00000509177 MRPS9P82933 396 aaKnown RBP12.45□□□□□ -0.42
TUSC3-208ENST00000509177 SP2Q02086 613 aa12.45□□□□□ -0.42
TUSC3-208ENST00000509177 NEDD9Q14511 834 aa12.45□□□□□ -0.42
TUSC3-208ENST00000509177 KIAA0753Q2KHM9 967 aa12.45□□□□□ -0.42
TUSC3-208ENST00000509177 XRRA1Q6P2D8 792 aa12.45□□□□□ -0.42
TUSC3-208ENST00000509177 BLOC1S2Q6QNY1 142 aa12.45□□□□□ -0.42
TUSC3-208ENST00000509177 NLRX1Q86UT6 975 aa12.45□□□□□ -0.42
TUSC3-208ENST00000509177 KAT2BQ92831 832 aa12.45□□□□□ -0.42
TUSC3-208ENST00000509177 GPKOWQ92917 476 aaPredicted RBP eCLIP12.45□□□□□ -0.42
TUSC3-208ENST00000509177 FTOQ9C0B1 505 aaKnown RBP eCLIP12.45□□□□□ -0.42
TUSC3-208ENST00000509177 EHMT1Q9H9B1 1298 aa12.45□□□□□ -0.42
TUSC3-208ENST00000509177 C11orf16Q9NQ32 467 aa12.45□□□□□ -0.42
TUSC3-208ENST00000509177 BRPF3Q9ULD4 1205 aa12.45□□□□□ -0.42
TUSC3-208ENST00000509177 PTPRSQ13332 1948 aa12.45□□□□□ -0.42
TUSC3-208ENST00000509177 LCHNA4D1U4 455 aa12.44□□□□□ -0.42
TUSC3-208ENST00000509177 SPATA31C2B4DYI2 1134 aa12.44□□□□□ -0.42
TUSC3-208ENST00000509177 KIF28PB7ZC32 967 aa12.44□□□□□ -0.42
TUSC3-208ENST00000509177 RBAK-RBAKDNI3L0D1 243 aa12.44□□□□□ -0.42
TUSC3-208ENST00000509177 MEIS2O14770 477 aa12.44□□□□□ -0.42
TUSC3-208ENST00000509177 FIBPO43427 364 aa12.44□□□□□ -0.42
TUSC3-208ENST00000509177 CPA1P15085 419 aa12.44□□□□□ -0.42
TUSC3-208ENST00000509177 PSMA5P28066 241 aa12.44□□□□□ -0.42
TUSC3-208ENST00000509177 GPNMBQ14956 572 aa12.44□□□□□ -0.42
TUSC3-208ENST00000509177 UBE2SQ16763 222 aa12.44□□□□□ -0.42
TUSC3-208ENST00000509177 HSDL1Q3SXM5 330 aa12.44□□□□□ -0.42
TUSC3-208ENST00000509177 TMEM31Q5JXX7 168 aa12.44□□□□□ -0.42
TUSC3-208ENST00000509177 PCNX4Q63HM2 1172 aa12.44□□□□□ -0.42
TUSC3-208ENST00000509177 GDF6Q6KF10 455 aaPredicted RBP12.44□□□□□ -0.42
TUSC3-208ENST00000509177 Q6ZUG5 572 aa12.44□□□□□ -0.42
TUSC3-208ENST00000509177 CYFIP1Q7L576 1253 aa12.44□□□□□ -0.42
TUSC3-208ENST00000509177 TMCO2Q7Z6W1 182 aaPredicted RBP12.44□□□□□ -0.42
TUSC3-208ENST00000509177 CTAGE1Q96RT6 745 aa12.44□□□□□ -0.42
TUSC3-208ENST00000509177 CD320Q9NPF0 282 aa12.44□□□□□ -0.42
TUSC3-208ENST00000509177 HDAC6Q9UBN7 1215 aa12.44□□□□□ -0.42
TUSC3-208ENST00000509177 HCN4Q9Y3Q4 1203 aa12.44□□□□□ -0.42
TUSC3-208ENST00000509177 SNX14Q9Y5W7 946 aa12.44□□□□□ -0.42
TUSC3-208ENST00000509177 V9GY48 417 aaPredicted RBP12.44□□□□□ -0.42
TUSC3-208ENST00000509177 MUC6Q6W4X9 2439 aa12.44□□□□□ -0.42
TUSC3-208ENST00000509177 COL4A4P53420 1690 aaPredicted RBP12.44□□□□□ -0.42
TUSC3-208ENST00000509177 CCDC196A0A1B0GTZ2 297 aa12.43□□□□□ -0.42
TUSC3-208ENST00000509177 GPR37L1O60883 481 aa12.43□□□□□ -0.42
TUSC3-208ENST00000509177 BAIAP3O94812 1187 aa12.43□□□□□ -0.42
TUSC3-208ENST00000509177 ICAM3P32942 547 aa12.43□□□□□ -0.42
TUSC3-208ENST00000509177 HSPA4P34932 840 aa12.43□□□□□ -0.42
TUSC3-208ENST00000509177 METAP2P50579 478 aaKnown RBP eCLIP12.43□□□□□ -0.42
TUSC3-208ENST00000509177 WDR5P61964 334 aaKnown RBP12.43□□□□□ -0.42
TUSC3-208ENST00000509177 SP4Q02446 784 aa12.43□□□□□ -0.42
TUSC3-208ENST00000509177 APOBRQ0VD83 1088 aa12.43□□□□□ -0.42
TUSC3-208ENST00000509177 UTP14CQ5TAP6 766 aaKnown RBP12.43□□□□□ -0.42
TUSC3-208ENST00000509177 SESTD1Q86VW0 696 aa12.43□□□□□ -0.42
TUSC3-208ENST00000509177 GIMAP8Q8ND71 665 aaPredicted RBP12.43□□□□□ -0.42
TUSC3-208ENST00000509177 CAGE1Q8TC20 777 aa12.43□□□□□ -0.42
TUSC3-208ENST00000509177 AFAP1L1Q8TED9 768 aa12.43□□□□□ -0.42
TUSC3-208ENST00000509177 GDPD5Q8WTR4 605 aa12.43□□□□□ -0.42
TUSC3-208ENST00000509177 BRF1Q92994 677 aa12.43□□□□□ -0.42
TUSC3-208ENST00000509177 CDHR1Q96JP9 859 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms