RNA–Protein interactions for RNA: ENST00000508952.5

PACRGL-220, Transcript of parkin coregulated like, humanhuman

TSL 1 (best)

Gene PACRGL, Length 987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACRGL-220ENST00000508952 HMGB1P09429 215 aaKnown RBP25.35■■□□□ 1.65
PACRGL-220ENST00000508952 CKBP12277 381 aa25.35■■□□□ 1.65
PACRGL-220ENST00000508952 MYOGP15173 224 aa25.35■■□□□ 1.65
PACRGL-220ENST00000508952 CDC27P30260 824 aa25.35■■□□□ 1.65
PACRGL-220ENST00000508952 HSPA4P34932 840 aa25.35■■□□□ 1.65
PACRGL-220ENST00000508952 SP4Q02446 784 aa25.35■■□□□ 1.65
PACRGL-220ENST00000508952 TYW1BQ6NUM6 668 aa25.35■■□□□ 1.65
PACRGL-220ENST00000508952 NLRX1Q86UT6 975 aa25.35■■□□□ 1.65
PACRGL-220ENST00000508952 JAKMIP1Q96N16 626 aaKnown RBP25.35■■□□□ 1.65
PACRGL-220ENST00000508952 GPR20Q99678 358 aa25.35■■□□□ 1.65
PACRGL-220ENST00000508952 TUT1Q9H6E5 874 aaKnown RBP25.35■■□□□ 1.65
PACRGL-220ENST00000508952 FAM217BQ9NTX9 383 aaPredicted RBP25.35■■□□□ 1.65
PACRGL-220ENST00000508952 SNX14Q9Y5W7 946 aa25.35■■□□□ 1.65
PACRGL-220ENST00000508952 SPDYE3A6NKU9 549 aa25.34■■□□□ 1.65
PACRGL-220ENST00000508952 NAPAP54920 295 aa25.34■■□□□ 1.65
PACRGL-220ENST00000508952 FGD1P98174 961 aa25.34■■□□□ 1.65
PACRGL-220ENST00000508952 RBL2Q08999 1139 aa25.34■■□□□ 1.65
PACRGL-220ENST00000508952 PTK7Q13308 1070 aa25.34■■□□□ 1.65
PACRGL-220ENST00000508952 GPNMBQ14956 572 aa25.34■■□□□ 1.65
PACRGL-220ENST00000508952 TRIM71Q2Q1W2 868 aaKnown RBP25.34■■□□□ 1.65
PACRGL-220ENST00000508952 TRIM50Q86XT4 487 aa25.34■■□□□ 1.65
PACRGL-220ENST00000508952 PCDHA6Q9UN73 950 aa25.34■■□□□ 1.65
PACRGL-220ENST00000508952 PCDHA8Q9Y5H6 950 aa25.34■■□□□ 1.65
PACRGL-220ENST00000508952 V9GY48 417 aaPredicted RBP25.34■■□□□ 1.65
PACRGL-220ENST00000508952 ITGB5P18084 799 aa25.33■■□□□ 1.65
PACRGL-220ENST00000508952 APOBRQ0VD83 1088 aa25.33■■□□□ 1.65
PACRGL-220ENST00000508952 Q6ZUG5 572 aa25.33■■□□□ 1.65
PACRGL-220ENST00000508952 SENP7Q9BQF6 1050 aa25.33■■□□□ 1.65
PACRGL-220ENST00000508952 USP26Q9BXU7 913 aa25.33■■□□□ 1.65
PACRGL-220ENST00000508952 PRDM12Q9H4Q4 367 aa25.33■■□□□ 1.65
PACRGL-220ENST00000508952 SLC28A3Q9HAS3 691 aa25.33■■□□□ 1.65
PACRGL-220ENST00000508952 PTPRSQ13332 1948 aa25.33■■□□□ 1.65
PACRGL-220ENST00000508952 ATP9AO75110 1047 aa25.32■■□□□ 1.64
PACRGL-220ENST00000508952 NEFLP07196 543 aa25.32■■□□□ 1.64
PACRGL-220ENST00000508952 SMIM10L2AP0DMW4 78 aa25.32■■□□□ 1.64
PACRGL-220ENST00000508952 SMIM10L2BP0DMW5 78 aa25.32■■□□□ 1.64
PACRGL-220ENST00000508952 UTP14CQ5TAP6 766 aaKnown RBP25.32■■□□□ 1.64
PACRGL-220ENST00000508952 PHF6Q8IWS0 365 aaKnown RBP eCLIP25.32■■□□□ 1.64
PACRGL-220ENST00000508952 GPRASP2Q96D09 838 aa25.32■■□□□ 1.64
PACRGL-220ENST00000508952 PKD2L1Q9P0L9 805 aa25.32■■□□□ 1.64
PACRGL-220ENST00000508952 PCDHA11Q9Y5I1 949 aa25.32■■□□□ 1.64
PACRGL-220ENST00000508952 C17orf102A2RUQ5 167 aa25.31■■□□□ 1.64
PACRGL-220ENST00000508952 NBNO60934 754 aa25.31■■□□□ 1.64
PACRGL-220ENST00000508952 ZNF618Q5T7W0 954 aa25.31■■□□□ 1.64
PACRGL-220ENST00000508952 BRF1Q92994 677 aa25.31■■□□□ 1.64
PACRGL-220ENST00000508952 PGBD1Q96JS3 809 aa25.31■■□□□ 1.64
PACRGL-220ENST00000508952 RIC8AQ9NPQ8 531 aa25.31■■□□□ 1.64
PACRGL-220ENST00000508952 UBIAD1Q9Y5Z9 338 aa25.31■■□□□ 1.64
PACRGL-220ENST00000508952 STXBP3O00186 592 aa25.3■■□□□ 1.64
PACRGL-220ENST00000508952 KCNA2P16389 499 aa25.3■■□□□ 1.64
PACRGL-220ENST00000508952 ADD1P35611 737 aaKnown RBP25.3■■□□□ 1.64
PACRGL-220ENST00000508952 METAP2P50579 478 aaKnown RBP eCLIP25.3■■□□□ 1.64
PACRGL-220ENST00000508952 RCAN1P53805 252 aa25.3■■□□□ 1.64
PACRGL-220ENST00000508952 PPP1R18Q6NYC8 613 aa25.3■■□□□ 1.64
PACRGL-220ENST00000508952 TRAF7Q6Q0C0 670 aa25.3■■□□□ 1.64
PACRGL-220ENST00000508952 BLOC1S2Q6QNY1 142 aa25.3■■□□□ 1.64
PACRGL-220ENST00000508952 SERINC5Q86VE9 423 aa25.3■■□□□ 1.64
PACRGL-220ENST00000508952 GIMAP8Q8ND71 665 aaPredicted RBP25.3■■□□□ 1.64
PACRGL-220ENST00000508952 ATP6V0A1Q93050 837 aa25.3■■□□□ 1.64
PACRGL-220ENST00000508952 SLC9A7Q96T83 725 aa25.3■■□□□ 1.64
PACRGL-220ENST00000508952 RNPEPQ9H4A4 650 aa25.3■■□□□ 1.64
PACRGL-220ENST00000508952 DLL1O00548 723 aa25.29■■□□□ 1.64
PACRGL-220ENST00000508952 REC8O95072 547 aa25.29■■□□□ 1.64
PACRGL-220ENST00000508952 CXCL10P02778 98 aa25.29■■□□□ 1.64
PACRGL-220ENST00000508952 HOXC8P31273 242 aa25.29■■□□□ 1.64
PACRGL-220ENST00000508952 ADCY7P51828 1080 aa25.29■■□□□ 1.64
PACRGL-220ENST00000508952 MTMR1Q13613 665 aa25.29■■□□□ 1.64
PACRGL-220ENST00000508952 MBTPS1Q14703 1052 aa25.29■■□□□ 1.64
PACRGL-220ENST00000508952 TCTN1Q2MV58 587 aa25.29■■□□□ 1.64
PACRGL-220ENST00000508952 PPP2R2DQ66LE6 453 aa25.29■■□□□ 1.64
PACRGL-220ENST00000508952 CDHR1Q96JP9 859 aa25.29■■□□□ 1.64
PACRGL-220ENST00000508952 GAS2L1Q99501 681 aaPredicted RBP25.29■■□□□ 1.64
PACRGL-220ENST00000508952 EHMT1Q9H9B1 1298 aa25.29■■□□□ 1.64
PACRGL-220ENST00000508952 TREHO43280 583 aa25.28■■□□□ 1.64
PACRGL-220ENST00000508952 BAIAP3O94812 1187 aa25.28■■□□□ 1.64
PACRGL-220ENST00000508952 PARNO95453 639 aaKnown RBP25.28■■□□□ 1.64
PACRGL-220ENST00000508952 RPS6KB1P23443 525 aa25.28■■□□□ 1.64
PACRGL-220ENST00000508952 TCF7P36402 384 aaPredicted RBP25.28■■□□□ 1.64
PACRGL-220ENST00000508952 THPOP40225 353 aa25.28■■□□□ 1.64
PACRGL-220ENST00000508952 USP38Q8NB14 1042 aa25.28■■□□□ 1.64
PACRGL-220ENST00000508952 SETD4Q9NVD3 440 aa25.28■■□□□ 1.64
PACRGL-220ENST00000508952 BARHL2Q9NY43 387 aa25.28■■□□□ 1.64
PACRGL-220ENST00000508952 ZNF215Q9UL58 517 aaPredicted RBP25.28■■□□□ 1.64
PACRGL-220ENST00000508952 CUL9Q8IWT3 2517 aa25.27■■□□□ 1.64
PACRGL-220ENST00000508952 SMCO2A6NFE2 343 aa25.27■■□□□ 1.64
PACRGL-220ENST00000508952 hCG_1984214I3L0E3 225 aa25.27■■□□□ 1.64
PACRGL-220ENST00000508952 CA3P07451 260 aa25.27■■□□□ 1.64
PACRGL-220ENST00000508952 KCNJ6P48051 423 aa25.27■■□□□ 1.64
PACRGL-220ENST00000508952 WDR5P61964 334 aaKnown RBP25.27■■□□□ 1.64
PACRGL-220ENST00000508952 CNKSR3Q6P9H4 555 aa25.27■■□□□ 1.64
PACRGL-220ENST00000508952 HERC6Q8IVU3 1022 aa25.27■■□□□ 1.64
PACRGL-220ENST00000508952 ZNF713Q8N859 430 aaPredicted RBP25.27■■□□□ 1.64
PACRGL-220ENST00000508952 JADE2Q9NQC1 790 aa25.27■■□□□ 1.64
PACRGL-220ENST00000508952 TMEM260Q9NX78 707 aa25.27■■□□□ 1.64
PACRGL-220ENST00000508952 KAT6AQ92794 2004 aa25.26■■□□□ 1.63
PACRGL-220ENST00000508952 TRANK1O15050 2925 aa25.26■■□□□ 1.63
PACRGL-220ENST00000508952 ADGRE1Q14246 886 aa25.26■■□□□ 1.63
PACRGL-220ENST00000508952 TMCO2Q7Z6W1 182 aaPredicted RBP25.26■■□□□ 1.63
PACRGL-220ENST00000508952 CYP2W1Q8TAV3 490 aa25.26■■□□□ 1.63
PACRGL-220ENST00000508952 PHOSPHO2Q8TCD6 241 aa25.26■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms