RNA–Protein interactions for RNA: ENST00000508854.1

SH3D21-206, Transcript of SH3 domain containing 21, humanhuman

TSL 5

Gene SH3D21, Length 1,134 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21-206ENST00000508854 H3BNC9 293 aa11.6□□□□□ -0.55
SH3D21-206ENST00000508854 ZNF200P98182 395 aaPredicted RBP11.6□□□□□ -0.55
SH3D21-206ENST00000508854 GPM6BQ13491 265 aa11.6□□□□□ -0.55
SH3D21-206ENST00000508854 TCTN1Q2MV58 587 aa11.6□□□□□ -0.55
SH3D21-206ENST00000508854 BANK1Q8NDB2 785 aa11.6□□□□□ -0.55
SH3D21-206ENST00000508854 C17orf80Q9BSJ5 609 aa11.6□□□□□ -0.55
SH3D21-206ENST00000508854 UPF3BQ9BZI7 483 aaKnown RBP11.6□□□□□ -0.55
SH3D21-206ENST00000508854 KCNH6Q9H252 994 aa11.6□□□□□ -0.55
SH3D21-206ENST00000508854 PRKAG3Q9UGI9 489 aa11.6□□□□□ -0.55
SH3D21-206ENST00000508854 RWDD3Q9Y3V2 267 aa11.6□□□□□ -0.55
SH3D21-206ENST00000508854 BRWD1Q9NSI6 2320 aa11.59□□□□□ -0.55
SH3D21-206ENST00000508854 MICAL3Q7RTP6 2002 aa11.59□□□□□ -0.55
SH3D21-206ENST00000508854 PALM3A6NDB9 673 aaPredicted RBP11.59□□□□□ -0.55
SH3D21-206ENST00000508854 OPLAHO14841 1288 aa11.59□□□□□ -0.55
SH3D21-206ENST00000508854 RGS20O76081 388 aa11.59□□□□□ -0.55
SH3D21-206ENST00000508854 RB1P06400 928 aa11.59□□□□□ -0.55
SH3D21-206ENST00000508854 SMIM10L2AP0DMW4 78 aa11.59□□□□□ -0.55
SH3D21-206ENST00000508854 SMIM10L2BP0DMW5 78 aa11.59□□□□□ -0.55
SH3D21-206ENST00000508854 UBA1P22314 1058 aaKnown RBP11.59□□□□□ -0.55
SH3D21-206ENST00000508854 HOXA13P31271 388 aaPredicted RBP11.59□□□□□ -0.55
SH3D21-206ENST00000508854 HOXC8P31273 242 aa11.59□□□□□ -0.55
SH3D21-206ENST00000508854 ICAM3P32942 547 aa11.59□□□□□ -0.55
SH3D21-206ENST00000508854 MKRN4PQ13434 485 aaPredicted RBP11.59□□□□□ -0.55
SH3D21-206ENST00000508854 METTL7BQ6UX53 244 aa11.59□□□□□ -0.55
SH3D21-206ENST00000508854 CHD1LQ86WJ1 897 aa11.59□□□□□ -0.55
SH3D21-206ENST00000508854 TMEM192Q8IY95 271 aa11.59□□□□□ -0.55
SH3D21-206ENST00000508854 STAG2Q8N3U4 1231 aa11.59□□□□□ -0.55
SH3D21-206ENST00000508854 GIMAP8Q8ND71 665 aaPredicted RBP11.59□□□□□ -0.55
SH3D21-206ENST00000508854 NEK9Q8TD19 979 aa11.59□□□□□ -0.55
SH3D21-206ENST00000508854 WNT8BQ93098 351 aa11.59□□□□□ -0.55
SH3D21-206ENST00000508854 PABPC5Q96DU9 382 aaKnown RBP11.59□□□□□ -0.55
SH3D21-206ENST00000508854 RNPEPQ9H4A4 650 aa11.59□□□□□ -0.55
SH3D21-206ENST00000508854 NSUN3Q9H649 340 aaKnown RBP11.59□□□□□ -0.55
SH3D21-206ENST00000508854 MAD2L2Q9UI95 211 aa11.59□□□□□ -0.55
SH3D21-206ENST00000508854 PNMA6FA0A0J9YX94 578 aa11.58□□□□□ -0.56
SH3D21-206ENST00000508854 FAM86C2PA6NEL3 165 aa11.58□□□□□ -0.56
SH3D21-206ENST00000508854 TREHO43280 583 aa11.58□□□□□ -0.56
SH3D21-206ENST00000508854 FIBPO43427 364 aa11.58□□□□□ -0.56
SH3D21-206ENST00000508854 UPP2O95045 317 aa11.58□□□□□ -0.56
SH3D21-206ENST00000508854 LGALS2P05162 132 aa11.58□□□□□ -0.56
SH3D21-206ENST00000508854 RPLP2P05387 115 aaKnown RBP11.58□□□□□ -0.56
SH3D21-206ENST00000508854 SP2Q02086 613 aa11.58□□□□□ -0.56
SH3D21-206ENST00000508854 SART3Q15020 963 aaKnown RBP11.58□□□□□ -0.56
SH3D21-206ENST00000508854 FAM26DQ5JW98 314 aa11.58□□□□□ -0.56
SH3D21-206ENST00000508854 XRRA1Q6P2D8 792 aa11.58□□□□□ -0.56
SH3D21-206ENST00000508854 FCHSD1Q86WN1 690 aa11.58□□□□□ -0.56
SH3D21-206ENST00000508854 PLEKHM2Q8IWE5 1019 aa11.58□□□□□ -0.56
SH3D21-206ENST00000508854 SMC5Q8IY18 1101 aa11.58□□□□□ -0.56
SH3D21-206ENST00000508854 KHSRPQ92945 711 aaKnown RBP eCLIP11.58□□□□□ -0.56
SH3D21-206ENST00000508854 IL17RAQ96F46 866 aa11.58□□□□□ -0.56
SH3D21-206ENST00000508854 POP1Q99575 1024 aaKnown RBP11.58□□□□□ -0.56
SH3D21-206ENST00000508854 IFIH1Q9BYX4 1025 aaKnown RBP11.58□□□□□ -0.56
SH3D21-206ENST00000508854 LMAN2LQ9H0V9 348 aa11.58□□□□□ -0.56
SH3D21-206ENST00000508854 RIOX1Q9H6W3 641 aa11.58□□□□□ -0.56
SH3D21-206ENST00000508854 CD320Q9NPF0 282 aa11.58□□□□□ -0.56
SH3D21-206ENST00000508854 C11orf16Q9NQ32 467 aa11.58□□□□□ -0.56
SH3D21-206ENST00000508854 NRCAMQ92823 1304 aa11.58□□□□□ -0.56
SH3D21-206ENST00000508854 COL4A6Q14031 1691 aa11.57□□□□□ -0.56
SH3D21-206ENST00000508854 SPATA31C2B4DYI2 1134 aa11.57□□□□□ -0.56
SH3D21-206ENST00000508854 DCXO43602 365 aa11.57□□□□□ -0.56
SH3D21-206ENST00000508854 SORBS3O60504 671 aa11.57□□□□□ -0.56
SH3D21-206ENST00000508854 PPP1R11O60927 126 aaPredicted RBP11.57□□□□□ -0.56
SH3D21-206ENST00000508854 IL9P15248 144 aa11.57□□□□□ -0.56
SH3D21-206ENST00000508854 NUCB1Q02818 461 aa11.57□□□□□ -0.56
SH3D21-206ENST00000508854 HIC1Q14526 733 aa11.57□□□□□ -0.56
SH3D21-206ENST00000508854 SEC23AQ15436 765 aa11.57□□□□□ -0.56
SH3D21-206ENST00000508854 B4GALNT3Q6L9W6 998 aa11.57□□□□□ -0.56
SH3D21-206ENST00000508854 EP400NLQ6ZTU2 488 aa11.57□□□□□ -0.56
SH3D21-206ENST00000508854 RSPH3Q86UC2 560 aa11.57□□□□□ -0.56
SH3D21-206ENST00000508854 HOMER1Q86YM7 354 aa11.57□□□□□ -0.56
SH3D21-206ENST00000508854 FIBCD1Q8N539 461 aa11.57□□□□□ -0.56
SH3D21-206ENST00000508854 CUL5Q93034 780 aa11.57□□□□□ -0.56
SH3D21-206ENST00000508854 UIMC1Q96RL1 719 aa11.57□□□□□ -0.56
SH3D21-206ENST00000508854 SENP7Q9BQF6 1050 aa11.57□□□□□ -0.56
SH3D21-206ENST00000508854 C11orf84Q9BUA3 381 aaPredicted RBP11.57□□□□□ -0.56
SH3D21-206ENST00000508854 U3KPZ7 1027 aaPredicted RBP11.57□□□□□ -0.56
SH3D21-206ENST00000508854 C5orf67F2Z3F1 127 aa11.56□□□□□ -0.56
SH3D21-206ENST00000508854 ARHGAP4P98171 946 aa11.56□□□□□ -0.56
SH3D21-206ENST00000508854 GRM4Q14833 912 aa11.56□□□□□ -0.56
SH3D21-206ENST00000508854 COL19A1Q14993 1142 aa11.56□□□□□ -0.56
SH3D21-206ENST00000508854 TCEAL5Q5H9L2 206 aa11.56□□□□□ -0.56
SH3D21-206ENST00000508854 TAF2Q6P1X5 1199 aa11.56□□□□□ -0.56
SH3D21-206ENST00000508854 CYFIP1Q7L576 1253 aa11.56□□□□□ -0.56
SH3D21-206ENST00000508854 CATIPQ7Z7H3 387 aa11.56□□□□□ -0.56
SH3D21-206ENST00000508854 RPAINQ86UA6 219 aa11.56□□□□□ -0.56
SH3D21-206ENST00000508854 NLRX1Q86UT6 975 aa11.56□□□□□ -0.56
SH3D21-206ENST00000508854 IL31RAQ8NI17 732 aa11.56□□□□□ -0.56
SH3D21-206ENST00000508854 TNPO1Q92973 898 aaKnown RBP11.56□□□□□ -0.56
SH3D21-206ENST00000508854 PPP2R3CQ969Q6 453 aa11.56□□□□□ -0.56
SH3D21-206ENST00000508854 CDHR1Q96JP9 859 aa11.56□□□□□ -0.56
SH3D21-206ENST00000508854 INPP4AQ96PE3 977 aaPredicted RBP11.56□□□□□ -0.56
SH3D21-206ENST00000508854 PIGSQ96S52 555 aa11.56□□□□□ -0.56
SH3D21-206ENST00000508854 GPR20Q99678 358 aa11.56□□□□□ -0.56
SH3D21-206ENST00000508854 SETD4Q9NVD3 440 aa11.56□□□□□ -0.56
SH3D21-206ENST00000508854 FRMPD4Q14CM0 1322 aa11.56□□□□□ -0.56
SH3D21-206ENST00000508854 RALGAPA2Q2PPJ7 1873 aa11.55□□□□□ -0.56
SH3D21-206ENST00000508854 POTEB3A0JP26 581 aa11.55□□□□□ -0.56
SH3D21-206ENST00000508854 H3BQ06 376 aaPredicted RBP11.55□□□□□ -0.56
SH3D21-206ENST00000508854 IFIT3O14879 490 aaKnown RBP11.55□□□□□ -0.56
SH3D21-206ENST00000508854 CTSHP09668 335 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms