RNA–Protein interactions for RNA: ENST00000508848.5

POLR2J3-213, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 1,030 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-213ENST00000508848 IRX5P78411 483 aaPredicted RBP12.07□□□□□ -0.48
POLR2J3-213ENST00000508848 FAAP100Q0VG06 881 aa12.07□□□□□ -0.48
POLR2J3-213ENST00000508848 HSDL1Q3SXM5 330 aa12.07□□□□□ -0.48
POLR2J3-213ENST00000508848 JAKMIP3Q5VZ66 844 aa12.07□□□□□ -0.48
POLR2J3-213ENST00000508848 FAM126BQ8IXS8 530 aa12.07□□□□□ -0.48
POLR2J3-213ENST00000508848 NECAB1Q8N987 351 aa12.07□□□□□ -0.48
POLR2J3-213ENST00000508848 COPS5Q92905 334 aa12.07□□□□□ -0.48
POLR2J3-213ENST00000508848 SPATA33Q96N06 139 aa12.07□□□□□ -0.48
POLR2J3-213ENST00000508848 GDF15Q99988 308 aa12.07□□□□□ -0.48
POLR2J3-213ENST00000508848 PRO3102Q9H379 93 aa12.07□□□□□ -0.48
POLR2J3-213ENST00000508848 TBC1D22BQ9NU19 505 aa12.07□□□□□ -0.48
POLR2J3-213ENST00000508848 RTEL1Q9NZ71 1219 aa12.07□□□□□ -0.48
POLR2J3-213ENST00000508848 KIF3AQ9Y496 699 aa12.07□□□□□ -0.48
POLR2J3-213ENST00000508848 TLR3O15455 904 aaKnown RBP12.06□□□□□ -0.48
POLR2J3-213ENST00000508848 EDIL3O43854 480 aa12.06□□□□□ -0.48
POLR2J3-213ENST00000508848 ATP9AO75110 1047 aa12.06□□□□□ -0.48
POLR2J3-213ENST00000508848 MYCNP04198 464 aaPredicted RBP12.06□□□□□ -0.48
POLR2J3-213ENST00000508848 GCFC2P16383 781 aaKnown RBP12.06□□□□□ -0.48
POLR2J3-213ENST00000508848 ATN1P54259 1190 aaPredicted RBP12.06□□□□□ -0.48
POLR2J3-213ENST00000508848 ST3GAL1Q11201 340 aa12.06□□□□□ -0.48
POLR2J3-213ENST00000508848 TRIM60Q495X7 471 aa12.06□□□□□ -0.48
POLR2J3-213ENST00000508848 Q4G0T1 1027 aa12.06□□□□□ -0.48
POLR2J3-213ENST00000508848 PPP4R3AQ6IN85 833 aa12.06□□□□□ -0.48
POLR2J3-213ENST00000508848 SEPT1Q8WYJ6 367 aa12.06□□□□□ -0.48
POLR2J3-213ENST00000508848 KAT2BQ92831 832 aa12.06□□□□□ -0.48
POLR2J3-213ENST00000508848 TNPO1Q92973 898 aaKnown RBP12.06□□□□□ -0.48
POLR2J3-213ENST00000508848 VTI1AQ96AJ9 217 aa12.06□□□□□ -0.48
POLR2J3-213ENST00000508848 GPR20Q99678 358 aa12.06□□□□□ -0.48
POLR2J3-213ENST00000508848 C16orf70Q9BSU1 422 aa12.06□□□□□ -0.48
POLR2J3-213ENST00000508848 ALG1Q9BT22 464 aa12.06□□□□□ -0.48
POLR2J3-213ENST00000508848 TMEM260Q9NX78 707 aa12.06□□□□□ -0.48
POLR2J3-213ENST00000508848 TRIP12Q14669 1992 aaPredicted RBP12.06□□□□□ -0.48
POLR2J3-213ENST00000508848 FAM86B1E9PN63 330 aa12.05□□□□□ -0.48
POLR2J3-213ENST00000508848 H3BRB1 525 aa12.05□□□□□ -0.48
POLR2J3-213ENST00000508848 DHX15O43143 795 aaKnown RBP12.05□□□□□ -0.48
POLR2J3-213ENST00000508848 LGR5O75473 907 aa12.05□□□□□ -0.48
POLR2J3-213ENST00000508848 MMP1P03956 469 aa12.05□□□□□ -0.48
POLR2J3-213ENST00000508848 CLTBP09497 229 aa12.05□□□□□ -0.48
POLR2J3-213ENST00000508848 FAM86B2P0C5J1 330 aa12.05□□□□□ -0.48
POLR2J3-213ENST00000508848 HOXC8P31273 242 aa12.05□□□□□ -0.48
POLR2J3-213ENST00000508848 ZNF76P36508 570 aa12.05□□□□□ -0.48
POLR2J3-213ENST00000508848 SLC26A2P50443 739 aa12.05□□□□□ -0.48
POLR2J3-213ENST00000508848 TRIM29Q14134 588 aa12.05□□□□□ -0.48
POLR2J3-213ENST00000508848 NONOQ15233 471 aaKnown RBP eCLIP12.05□□□□□ -0.48
POLR2J3-213ENST00000508848 FAM43BQ6ZT52 329 aaPredicted RBP12.05□□□□□ -0.48
POLR2J3-213ENST00000508848 CYFIP1Q7L576 1253 aa12.05□□□□□ -0.48
POLR2J3-213ENST00000508848 FBXO18Q8NFZ0 1043 aa12.05□□□□□ -0.48
POLR2J3-213ENST00000508848 CYP2W1Q8TAV3 490 aa12.05□□□□□ -0.48
POLR2J3-213ENST00000508848 TMX3Q96JJ7 454 aa12.05□□□□□ -0.48
POLR2J3-213ENST00000508848 RIT2Q99578 217 aa12.05□□□□□ -0.48
POLR2J3-213ENST00000508848 SDF4Q9BRK5 362 aa12.05□□□□□ -0.48
POLR2J3-213ENST00000508848 TUT1Q9H6E5 874 aaKnown RBP12.05□□□□□ -0.48
POLR2J3-213ENST00000508848 AGO4Q9HCK5 861 aaKnown RBP12.05□□□□□ -0.48
POLR2J3-213ENST00000508848 BRMS1Q9HCU9 246 aa12.05□□□□□ -0.48
POLR2J3-213ENST00000508848 PDLIM7Q9NR12 457 aa12.05□□□□□ -0.48
POLR2J3-213ENST00000508848 PRKAG2Q9UGJ0 569 aa12.05□□□□□ -0.48
POLR2J3-213ENST00000508848 TBX21Q9UL17 535 aa12.05□□□□□ -0.48
POLR2J3-213ENST00000508848 IGKV6D-21A0A0A0MT36 114 aa12.04□□□□□ -0.48
POLR2J3-213ENST00000508848 IPO5O00410 1097 aaKnown RBP12.04□□□□□ -0.48
POLR2J3-213ENST00000508848 NOP56O00567 594 aaKnown RBP12.04□□□□□ -0.48
POLR2J3-213ENST00000508848 ADAMTS3O15072 1205 aa12.04□□□□□ -0.48
POLR2J3-213ENST00000508848 TBX3O15119 743 aa12.04□□□□□ -0.48
POLR2J3-213ENST00000508848 PARNO95453 639 aaKnown RBP12.04□□□□□ -0.48
POLR2J3-213ENST00000508848 TIMP1P01033 207 aa12.04□□□□□ -0.48
POLR2J3-213ENST00000508848 MYL3P08590 195 aa12.04□□□□□ -0.48
POLR2J3-213ENST00000508848 RBL2Q08999 1139 aa12.04□□□□□ -0.48
POLR2J3-213ENST00000508848 NBPF20Q3BBV1 942 aa12.04□□□□□ -0.48
POLR2J3-213ENST00000508848 PLPPR4Q7Z2D5 763 aa12.04□□□□□ -0.48
POLR2J3-213ENST00000508848 PLA2G4DQ86XP0 818 aa12.04□□□□□ -0.48
POLR2J3-213ENST00000508848 C7orf61Q8IZ16 206 aa12.04□□□□□ -0.48
POLR2J3-213ENST00000508848 RDM1Q8NG50 284 aa12.04□□□□□ -0.48
POLR2J3-213ENST00000508848 TBCKQ8TEA7 893 aa12.04□□□□□ -0.48
POLR2J3-213ENST00000508848 TNFRSF25Q93038 417 aa12.04□□□□□ -0.48
POLR2J3-213ENST00000508848 LENG9Q96B70 501 aa12.04□□□□□ -0.48
POLR2J3-213ENST00000508848 FAM20AQ96MK3 541 aa12.04□□□□□ -0.48
POLR2J3-213ENST00000508848 AIFM3Q96NN9 605 aa12.04□□□□□ -0.48
POLR2J3-213ENST00000508848 FOXP1Q9H334 677 aaPredicted RBP12.04□□□□□ -0.48
POLR2J3-213ENST00000508848 SMARCAD1Q9H4L7 1026 aa12.04□□□□□ -0.48
POLR2J3-213ENST00000508848 JPH1Q9HDC5 661 aaPredicted RBP12.04□□□□□ -0.48
POLR2J3-213ENST00000508848 SLC9A2Q9UBY0 812 aa12.04□□□□□ -0.48
POLR2J3-213ENST00000508848 ATP11BQ9Y2G3 1177 aa12.04□□□□□ -0.48
POLR2J3-213ENST00000508848 LTBP2Q14767 1821 aa12.04□□□□□ -0.48
POLR2J3-213ENST00000508848 LAMA2P24043 3122 aaKnown RBP12.04□□□□□ -0.48
POLR2J3-213ENST00000508848 TRIOBPQ9H2D6 2365 aa12.03□□□□□ -0.48
POLR2J3-213ENST00000508848 CCDC194A0A1B0GVG4 234 aa12.03□□□□□ -0.48
POLR2J3-213ENST00000508848 GSTTP1A0A1W2PQM5 241 aa12.03□□□□□ -0.48
POLR2J3-213ENST00000508848 PITPNM1O00562 1244 aa12.03□□□□□ -0.48
POLR2J3-213ENST00000508848 RPLP2P05387 115 aaKnown RBP12.03□□□□□ -0.48
POLR2J3-213ENST00000508848 ARP10275 920 aa12.03□□□□□ -0.48
POLR2J3-213ENST00000508848 GNAT1P11488 350 aa12.03□□□□□ -0.48
POLR2J3-213ENST00000508848 PTGS1P23219 599 aa12.03□□□□□ -0.48
POLR2J3-213ENST00000508848 KRT2P35908 639 aa12.03□□□□□ -0.48
POLR2J3-213ENST00000508848 PSEN2P49810 448 aa12.03□□□□□ -0.48
POLR2J3-213ENST00000508848 ORC2Q13416 577 aaPredicted RBP12.03□□□□□ -0.48
POLR2J3-213ENST00000508848 CUL4AQ13619 759 aa12.03□□□□□ -0.48
POLR2J3-213ENST00000508848 SAFBQ15424 915 aaKnown RBP eCLIP12.03□□□□□ -0.48
POLR2J3-213ENST00000508848 ZNF746Q6NUN9 644 aaPredicted RBP12.03□□□□□ -0.48
POLR2J3-213ENST00000508848 CCDC83Q8IWF9 413 aa12.03□□□□□ -0.48
POLR2J3-213ENST00000508848 SMAP1Q8IYB5 467 aaPredicted RBP12.03□□□□□ -0.48
POLR2J3-213ENST00000508848 TMEM39AQ9NV64 488 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms