RNA–Protein interactions for RNA: ENST00000508500.1

LMNA-222, Transcript of lamin A/C, humanhuman

TSL 1 (best)

Gene LMNA, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-222ENST00000508500 SYMPKQ92797 1274 aaKnown RBP18.68■□□□□ 0.58
LMNA-222ENST00000508500 CNTNAP5Q8WYK1 1306 aa18.68■□□□□ 0.58
LMNA-222ENST00000508500 PRRC2BQ5JSZ5 2229 aaKnown RBP18.68■□□□□ 0.58
LMNA-222ENST00000508500 NCOR1O75376 2440 aa18.67■□□□□ 0.58
LMNA-222ENST00000508500 FIBPO43427 364 aa18.67■□□□□ 0.58
LMNA-222ENST00000508500 NBNO60934 754 aa18.67■□□□□ 0.58
LMNA-222ENST00000508500 LGALS2P05162 132 aa18.67■□□□□ 0.58
LMNA-222ENST00000508500 SELPP16109 830 aa18.67■□□□□ 0.58
LMNA-222ENST00000508500 HOXC8P31273 242 aa18.67■□□□□ 0.58
LMNA-222ENST00000508500 PTK7Q13308 1070 aa18.67■□□□□ 0.58
LMNA-222ENST00000508500 MBTPS1Q14703 1052 aa18.67■□□□□ 0.58
LMNA-222ENST00000508500 RNF20Q5VTR2 975 aa18.67■□□□□ 0.58
LMNA-222ENST00000508500 TYW1BQ6NUM6 668 aa18.67■□□□□ 0.58
LMNA-222ENST00000508500 LRRC8DQ7L1W4 858 aa18.67■□□□□ 0.58
LMNA-222ENST00000508500 DHX32Q7L7V1 743 aaKnown RBP18.67■□□□□ 0.58
LMNA-222ENST00000508500 GPR20Q99678 358 aa18.67■□□□□ 0.58
LMNA-222ENST00000508500 FTOQ9C0B1 505 aaKnown RBP eCLIP18.67■□□□□ 0.58
LMNA-222ENST00000508500 FAM217BQ9NTX9 383 aaPredicted RBP18.67■□□□□ 0.58
LMNA-222ENST00000508500 PCDHA11Q9Y5I1 949 aa18.67■□□□□ 0.58
LMNA-222ENST00000508500 WDR81Q562E7 1941 aa18.66■□□□□ 0.58
LMNA-222ENST00000508500 H3BRB1 525 aa18.66■□□□□ 0.58
LMNA-222ENST00000508500 ATP9AO75110 1047 aa18.66■□□□□ 0.58
LMNA-222ENST00000508500 ARHGEF15O94989 841 aa18.66■□□□□ 0.58
LMNA-222ENST00000508500 CXCL10P02778 98 aa18.66■□□□□ 0.58
LMNA-222ENST00000508500 GNPTABQ3T906 1256 aa18.66■□□□□ 0.58
LMNA-222ENST00000508500 ZNF618Q5T7W0 954 aa18.66■□□□□ 0.58
LMNA-222ENST00000508500 METTL7BQ6UX53 244 aa18.66■□□□□ 0.58
LMNA-222ENST00000508500 CCDC155Q8N6L0 562 aa18.66■□□□□ 0.58
LMNA-222ENST00000508500 KCNB2Q92953 911 aa18.66■□□□□ 0.58
LMNA-222ENST00000508500 CUL5Q93034 780 aa18.66■□□□□ 0.58
LMNA-222ENST00000508500 TUT1Q9H6E5 874 aaKnown RBP18.66■□□□□ 0.58
LMNA-222ENST00000508500 PSTPIP2Q9H939 334 aa18.66■□□□□ 0.58
LMNA-222ENST00000508500 SLC28A3Q9HAS3 691 aa18.66■□□□□ 0.58
LMNA-222ENST00000508500 XIRP2A4UGR9 3374 aa18.65■□□□□ 0.58
LMNA-222ENST00000508500 ACTN1P12814 892 aa18.65■□□□□ 0.58
LMNA-222ENST00000508500 CPA1P15085 419 aa18.65■□□□□ 0.58
LMNA-222ENST00000508500 ITGB5P18084 799 aa18.65■□□□□ 0.58
LMNA-222ENST00000508500 NEDD9Q14511 834 aa18.65■□□□□ 0.58
LMNA-222ENST00000508500 WWC2Q6AWC2 1192 aa18.65■□□□□ 0.58
LMNA-222ENST00000508500 XRRA1Q6P2D8 792 aa18.65■□□□□ 0.58
LMNA-222ENST00000508500 RNPEPQ9H4A4 650 aa18.65■□□□□ 0.58
LMNA-222ENST00000508500 KCNA2P16389 499 aa18.64■□□□□ 0.57
LMNA-222ENST00000508500 CDC27P30260 824 aa18.64■□□□□ 0.57
LMNA-222ENST00000508500 TMCO2Q7Z6W1 182 aaPredicted RBP18.64■□□□□ 0.57
LMNA-222ENST00000508500 SERINC5Q86VE9 423 aa18.64■□□□□ 0.57
LMNA-222ENST00000508500 TRIM50Q86XT4 487 aa18.64■□□□□ 0.57
LMNA-222ENST00000508500 PHOSPHO2Q8TCD6 241 aa18.64■□□□□ 0.57
LMNA-222ENST00000508500 ATXN2LQ8WWM7 1075 aaKnown RBP18.64■□□□□ 0.57
LMNA-222ENST00000508500 SLC9A7Q96T83 725 aa18.64■□□□□ 0.57
LMNA-222ENST00000508500 GAS2L1Q99501 681 aaPredicted RBP18.64■□□□□ 0.57
LMNA-222ENST00000508500 SENP7Q9BQF6 1050 aa18.64■□□□□ 0.57
LMNA-222ENST00000508500 OSBPL7Q9BZF2 842 aa18.64■□□□□ 0.57
LMNA-222ENST00000508500 PCDHA6Q9UN73 950 aa18.64■□□□□ 0.57
LMNA-222ENST00000508500 PCDHA8Q9Y5H6 950 aa18.64■□□□□ 0.57
LMNA-222ENST00000508500 UBIAD1Q9Y5Z9 338 aa18.64■□□□□ 0.57
LMNA-222ENST00000508500 COL4A4P53420 1690 aaPredicted RBP18.63■□□□□ 0.57
LMNA-222ENST00000508500 BDP1A6H8Y1 2624 aa18.63■□□□□ 0.57
LMNA-222ENST00000508500 TREHO43280 583 aa18.63■□□□□ 0.57
LMNA-222ENST00000508500 CA3P07451 260 aa18.63■□□□□ 0.57
LMNA-222ENST00000508500 SMIM10L2AP0DMW4 78 aa18.63■□□□□ 0.57
LMNA-222ENST00000508500 SMIM10L2BP0DMW5 78 aa18.63■□□□□ 0.57
LMNA-222ENST00000508500 DEFB103AP81534 67 aa18.63■□□□□ 0.57
LMNA-222ENST00000508500 PPP2R2DQ66LE6 453 aa18.63■□□□□ 0.57
LMNA-222ENST00000508500 HEATR3Q7Z4Q2 680 aa18.63■□□□□ 0.57
LMNA-222ENST00000508500 SPRED2Q7Z698 418 aa18.63■□□□□ 0.57
LMNA-222ENST00000508500 HERC6Q8IVU3 1022 aa18.63■□□□□ 0.57
LMNA-222ENST00000508500 USP26Q9BXU7 913 aa18.63■□□□□ 0.57
LMNA-222ENST00000508500 RBM28Q9NW13 759 aaKnown RBP18.63■□□□□ 0.57
LMNA-222ENST00000508500 KLF18A0A0U1RQI7 1052 aa18.62■□□□□ 0.57
LMNA-222ENST00000508500 C17orf102A2RUQ5 167 aa18.62■□□□□ 0.57
LMNA-222ENST00000508500 RFXAPO00287 272 aa18.62■□□□□ 0.57
LMNA-222ENST00000508500 NOP56O00567 594 aaKnown RBP18.62■□□□□ 0.57
LMNA-222ENST00000508500 ZBTB43O43298 467 aa18.62■□□□□ 0.57
LMNA-222ENST00000508500 BAIAP3O94812 1187 aa18.62■□□□□ 0.57
LMNA-222ENST00000508500 WDR5P61964 334 aaKnown RBP18.62■□□□□ 0.57
LMNA-222ENST00000508500 ADAM17P78536 824 aa18.62■□□□□ 0.57
LMNA-222ENST00000508500 SP4Q02446 784 aa18.62■□□□□ 0.57
LMNA-222ENST00000508500 RTN1Q16799 776 aa18.62■□□□□ 0.57
LMNA-222ENST00000508500 CNKSR3Q6P9H4 555 aa18.62■□□□□ 0.57
LMNA-222ENST00000508500 NLRX1Q86UT6 975 aa18.62■□□□□ 0.57
LMNA-222ENST00000508500 GPRASP2Q96D09 838 aa18.62■□□□□ 0.57
LMNA-222ENST00000508500 ASB2Q96Q27 587 aa18.62■□□□□ 0.57
LMNA-222ENST00000508500 SETD4Q9NVD3 440 aa18.62■□□□□ 0.57
LMNA-222ENST00000508500 SNX14Q9Y5W7 946 aa18.62■□□□□ 0.57
LMNA-222ENST00000508500 V9GY48 417 aaPredicted RBP18.62■□□□□ 0.57
LMNA-222ENST00000508500 EVPLQ92817 2033 aa18.61■□□□□ 0.57
LMNA-222ENST00000508500 TCF20Q9UGU0 1960 aaKnown RBP18.61■□□□□ 0.57
LMNA-222ENST00000508500 GSTTP1A0A1W2PQM5 241 aa18.61■□□□□ 0.57
LMNA-222ENST00000508500 EPOPA6NHQ4 379 aa18.61■□□□□ 0.57
LMNA-222ENST00000508500 HSPA4P34932 840 aa18.61■□□□□ 0.57
LMNA-222ENST00000508500 MKRN4PQ13434 485 aaPredicted RBP18.61■□□□□ 0.57
LMNA-222ENST00000508500 UTP14CQ5TAP6 766 aaKnown RBP18.61■□□□□ 0.57
LMNA-222ENST00000508500 SYNE3Q6ZMZ3 975 aa18.61■□□□□ 0.57
LMNA-222ENST00000508500 PPM1EQ8WY54 764 aa18.61■□□□□ 0.57
LMNA-222ENST00000508500 ATP6V0A1Q93050 837 aa18.61■□□□□ 0.57
LMNA-222ENST00000508500 CCDC136Q96JN2 1154 aa18.61■□□□□ 0.57
LMNA-222ENST00000508500 PGBD1Q96JS3 809 aa18.61■□□□□ 0.57
LMNA-222ENST00000508500 CERS4Q9HA82 394 aa18.61■□□□□ 0.57
LMNA-222ENST00000508500 THEGQ9P2T0 379 aa18.61■□□□□ 0.57
LMNA-222ENST00000508500 MYH9P35579 1960 aaKnown RBP18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms