RNA–Protein interactions for RNA: ENST00000508499.5

USP46-207, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2 BASIC

Gene USP46, Length 1,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-207ENST00000508499 PCDHB6Q9Y5E3 794 aa9.8□□□□□ -0.84
USP46-207ENST00000508499 HTTP42858 3142 aa9.79□□□□□ -0.84
USP46-207ENST00000508499 MYH9P35579 1960 aaKnown RBP9.79□□□□□ -0.84
USP46-207ENST00000508499 WNT7AO00755 349 aa9.79□□□□□ -0.84
USP46-207ENST00000508499 NKRFO15226 690 aaKnown RBP eCLIP9.79□□□□□ -0.84
USP46-207ENST00000508499 NEMFO60524 1076 aa9.79□□□□□ -0.84
USP46-207ENST00000508499 HMGCRP04035 888 aa9.79□□□□□ -0.84
USP46-207ENST00000508499 CYBAP13498 195 aa9.79□□□□□ -0.84
USP46-207ENST00000508499 MTMR1Q13613 665 aa9.79□□□□□ -0.84
USP46-207ENST00000508499 IQSEC1Q6DN90 963 aa9.79□□□□□ -0.84
USP46-207ENST00000508499 TAPT1Q6NXT6 567 aa9.79□□□□□ -0.84
USP46-207ENST00000508499 B3GNT9Q6UX72 402 aa9.79□□□□□ -0.84
USP46-207ENST00000508499 TMEM87AQ8NBN3 555 aa9.79□□□□□ -0.84
USP46-207ENST00000508499 LINC00301Q8NCQ3 95 aa9.79□□□□□ -0.84
USP46-207ENST00000508499 SCFD2Q8WU76 684 aa9.79□□□□□ -0.84
USP46-207ENST00000508499 TRIB2Q92519 343 aa9.79□□□□□ -0.84
USP46-207ENST00000508499 SLC5A5Q92911 643 aa9.79□□□□□ -0.84
USP46-207ENST00000508499 TNPO1Q92973 898 aaKnown RBP9.79□□□□□ -0.84
USP46-207ENST00000508499 FERMT2Q96AC1 680 aa9.79□□□□□ -0.84
USP46-207ENST00000508499 USP28Q96RU2 1077 aa9.79□□□□□ -0.84
USP46-207ENST00000508499 KCNH7Q9NS40 1196 aa9.79□□□□□ -0.84
USP46-207ENST00000508499 TBC1D22BQ9NU19 505 aa9.79□□□□□ -0.84
USP46-207ENST00000508499 FLRT1Q9NZU1 646 aa9.79□□□□□ -0.84
USP46-207ENST00000508499 PTPN22Q9Y2R2 807 aa9.79□□□□□ -0.84
USP46-207ENST00000508499 Q9Y3F1 56 aa9.79□□□□□ -0.84
USP46-207ENST00000508499 SLC26A4O43511 780 aa9.78□□□□□ -0.84
USP46-207ENST00000508499 SLC37A4O43826 429 aa9.78□□□□□ -0.84
USP46-207ENST00000508499 PSMD10O75832 226 aa9.78□□□□□ -0.84
USP46-207ENST00000508499 TDP2O95551 362 aa9.78□□□□□ -0.84
USP46-207ENST00000508499 ZNF865P0CJ78 1059 aaPredicted RBP9.78□□□□□ -0.84
USP46-207ENST00000508499 CAPN2P17655 700 aa9.78□□□□□ -0.84
USP46-207ENST00000508499 CYP2B6P20813 491 aa9.78□□□□□ -0.84
USP46-207ENST00000508499 ZNF76P36508 570 aa9.78□□□□□ -0.84
USP46-207ENST00000508499 PTGDRQ13258 359 aa9.78□□□□□ -0.84
USP46-207ENST00000508499 SEMA3FQ13275 785 aa9.78□□□□□ -0.84
USP46-207ENST00000508499 ACVR2BQ13705 512 aa9.78□□□□□ -0.84
USP46-207ENST00000508499 PDIA5Q14554 519 aa9.78□□□□□ -0.84
USP46-207ENST00000508499 SF3A1Q15459 793 aaKnown RBP9.78□□□□□ -0.84
USP46-207ENST00000508499 MFSD14CQ5VZR4 134 aa9.78□□□□□ -0.84
USP46-207ENST00000508499 CTU1Q7Z7A3 348 aaKnown RBP9.78□□□□□ -0.84
USP46-207ENST00000508499 PLA2G4DQ86XP0 818 aa9.78□□□□□ -0.84
USP46-207ENST00000508499 KCTD17Q8N5Z5 321 aa9.78□□□□□ -0.84
USP46-207ENST00000508499 KCNG4Q8TDN1 519 aa9.78□□□□□ -0.84
USP46-207ENST00000508499 HAS1Q92839 578 aa9.78□□□□□ -0.84
USP46-207ENST00000508499 AGO4Q9HCK5 861 aaKnown RBP9.78□□□□□ -0.84
USP46-207ENST00000508499 DDX41Q9UJV9 622 aaKnown RBP9.78□□□□□ -0.84
USP46-207ENST00000508499 CNPY2Q9Y2B0 182 aa9.78□□□□□ -0.84
USP46-207ENST00000508499 IPO5O00410 1097 aaKnown RBP9.77□□□□□ -0.85
USP46-207ENST00000508499 MSH4O15457 936 aa9.77□□□□□ -0.85
USP46-207ENST00000508499 DHX15O43143 795 aaKnown RBP9.77□□□□□ -0.85
USP46-207ENST00000508499 ADCY3O60266 1144 aa9.77□□□□□ -0.85
USP46-207ENST00000508499 BAG4O95429 457 aaKnown RBP9.77□□□□□ -0.85
USP46-207ENST00000508499 OR52Z1P0C646 297 aa9.77□□□□□ -0.85
USP46-207ENST00000508499 MYCLP12524 364 aaPredicted RBP9.77□□□□□ -0.85
USP46-207ENST00000508499 KCNA2P16389 499 aa9.77□□□□□ -0.85
USP46-207ENST00000508499 MCM7P33993 719 aa9.77□□□□□ -0.85
USP46-207ENST00000508499 UBXN2AP68543 259 aa9.77□□□□□ -0.85
USP46-207ENST00000508499 DNM1Q05193 864 aaKnown RBP9.77□□□□□ -0.85
USP46-207ENST00000508499 SPIRE1Q08AE8 756 aa9.77□□□□□ -0.85
USP46-207ENST00000508499 PPP2R5CQ13362 524 aa9.77□□□□□ -0.85
USP46-207ENST00000508499 NEDD9Q14511 834 aa9.77□□□□□ -0.85
USP46-207ENST00000508499 TTLL4Q14679 1199 aa9.77□□□□□ -0.85
USP46-207ENST00000508499 CALCRLQ16602 461 aa9.77□□□□□ -0.85
USP46-207ENST00000508499 CCL14Q16627 93 aa9.77□□□□□ -0.85
USP46-207ENST00000508499 DUSP28Q4G0W2 176 aa9.77□□□□□ -0.85
USP46-207ENST00000508499 PRR16Q569H4 304 aa9.77□□□□□ -0.85
USP46-207ENST00000508499 FAM173BQ6P4H8 233 aa9.77□□□□□ -0.85
USP46-207ENST00000508499 IGSF22Q8N9C0 903 aa9.77□□□□□ -0.85
USP46-207ENST00000508499 RDM1Q8NG50 284 aa9.77□□□□□ -0.85
USP46-207ENST00000508499 CYP2W1Q8TAV3 490 aa9.77□□□□□ -0.85
USP46-207ENST00000508499 RAET1EQ8TD07 263 aa9.77□□□□□ -0.85
USP46-207ENST00000508499 AK8Q96MA6 479 aa9.77□□□□□ -0.85
USP46-207ENST00000508499 WDR11Q9BZH6 1224 aa9.77□□□□□ -0.85
USP46-207ENST00000508499 TRIM17Q9Y577 477 aa9.77□□□□□ -0.85
USP46-207ENST00000508499 SRPRBQ9Y5M8 271 aaKnown RBP9.77□□□□□ -0.85
USP46-207ENST00000508499 SPTLC2O15270 562 aa9.76□□□□□ -0.85
USP46-207ENST00000508499 SEPT4O43236 478 aa9.76□□□□□ -0.85
USP46-207ENST00000508499 MSCO60682 206 aa9.76□□□□□ -0.85
USP46-207ENST00000508499 ARP10275 920 aa9.76□□□□□ -0.85
USP46-207ENST00000508499 HOXD8P13378 290 aaPredicted RBP9.76□□□□□ -0.85
USP46-207ENST00000508499 MUTP22033 750 aa9.76□□□□□ -0.85
USP46-207ENST00000508499 GRK4P32298 578 aa9.76□□□□□ -0.85
USP46-207ENST00000508499 LBX1P52954 281 aa9.76□□□□□ -0.85
USP46-207ENST00000508499 ZNF174Q15697 407 aa9.76□□□□□ -0.85
USP46-207ENST00000508499 CSPP1Q1MSJ5 1256 aa9.76□□□□□ -0.85
USP46-207ENST00000508499 ZNF746Q6NUN9 644 aaPredicted RBP9.76□□□□□ -0.85
USP46-207ENST00000508499 FBXO46Q6PJ61 603 aaPredicted RBP9.76□□□□□ -0.85
USP46-207ENST00000508499 METTL7BQ6UX53 244 aa9.76□□□□□ -0.85
USP46-207ENST00000508499 EFCAB3Q8N7B9 438 aa9.76□□□□□ -0.85
USP46-207ENST00000508499 LEO1Q8WVC0 666 aaPredicted RBP9.76□□□□□ -0.85
USP46-207ENST00000508499 BBXQ8WY36 941 aaPredicted RBP9.76□□□□□ -0.85
USP46-207ENST00000508499 ZNF577Q9BSK1 485 aa9.76□□□□□ -0.85
USP46-207ENST00000508499 RAB34Q9BZG1 259 aa9.76□□□□□ -0.85
USP46-207ENST00000508499 TMEM60Q9H2L4 133 aa9.76□□□□□ -0.85
USP46-207ENST00000508499 TSKSQ9UJT2 592 aa9.76□□□□□ -0.85
USP46-207ENST00000508499 PCDHA12Q9UN75 941 aa9.76□□□□□ -0.85
USP46-207ENST00000508499 GNEQ9Y223 722 aaKnown RBP9.76□□□□□ -0.85
USP46-207ENST00000508499 BOLA1Q9Y3E2 137 aa9.76□□□□□ -0.85
USP46-207ENST00000508499 CLIC4Q9Y696 253 aa9.76□□□□□ -0.85
USP46-207ENST00000508499 DUSP11O75319 330 aaKnown RBP9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms