RNA–Protein interactions for RNA: ENST00000508476.5

UBE2D3-225, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 3

Gene UBE2D3, Length 601 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-225ENST00000508476 RPL13P26373 211 aaKnown RBP7.22□□□□□ -1.25
UBE2D3-225ENST00000508476 BUD31P41223 144 aaPredicted RBP7.22□□□□□ -1.25
UBE2D3-225ENST00000508476 PRR31Q5SQ13 230 aa7.22□□□□□ -1.25
UBE2D3-225ENST00000508476 TMC5Q6UXY8 1006 aa7.22□□□□□ -1.25
UBE2D3-225ENST00000508476 FRMD5Q7Z6J6 570 aa7.22□□□□□ -1.25
UBE2D3-225ENST00000508476 FERMT3Q86UX7 667 aa7.22□□□□□ -1.25
UBE2D3-225ENST00000508476 SCUBE1Q8IWY4 988 aa7.22□□□□□ -1.25
UBE2D3-225ENST00000508476 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.22□□□□□ -1.25
UBE2D3-225ENST00000508476 ADAMTS17Q8TE56 1095 aa7.22□□□□□ -1.25
UBE2D3-225ENST00000508476 DDX1Q92499 740 aaKnown RBP7.22□□□□□ -1.25
UBE2D3-225ENST00000508476 ARMC5Q96C12 935 aa7.22□□□□□ -1.25
UBE2D3-225ENST00000508476 USP40Q9NVE5 1235 aa7.22□□□□□ -1.25
UBE2D3-225ENST00000508476 TELO2Q9Y4R8 837 aa7.22□□□□□ -1.25
UBE2D3-225ENST00000508476 DUSP10Q9Y6W6 482 aa7.22□□□□□ -1.25
UBE2D3-225ENST00000508476 NCANO14594 1321 aa7.22□□□□□ -1.25
UBE2D3-225ENST00000508476 PRRG2O14669 202 aa7.21□□□□□ -1.26
UBE2D3-225ENST00000508476 TTLL6Q8N841 843 aa7.21□□□□□ -1.26
UBE2D3-225ENST00000508476 PMFBP1Q8TBY8 1022 aa7.21□□□□□ -1.26
UBE2D3-225ENST00000508476 PHOSPHO1Q8TCT1 267 aa7.21□□□□□ -1.26
UBE2D3-225ENST00000508476 TEPSINQ96N21 525 aa7.21□□□□□ -1.26
UBE2D3-225ENST00000508476 PCDH18Q9HCL0 1135 aa7.21□□□□□ -1.26
UBE2D3-225ENST00000508476 DDX3XO00571 662 aaKnown RBP eCLIP7.2□□□□□ -1.26
UBE2D3-225ENST00000508476 GJA9P57773 515 aa7.2□□□□□ -1.26
UBE2D3-225ENST00000508476 TUSC3Q13454 348 aa7.2□□□□□ -1.26
UBE2D3-225ENST00000508476 HABP4Q5JVS0 413 aaKnown RBP7.2□□□□□ -1.26
UBE2D3-225ENST00000508476 PHF19Q5T6S3 580 aa7.2□□□□□ -1.26
UBE2D3-225ENST00000508476 PROSER1Q86XN7 944 aa7.2□□□□□ -1.26
UBE2D3-225ENST00000508476 UHMK1Q8TAS1 419 aaKnown RBP7.2□□□□□ -1.26
UBE2D3-225ENST00000508476 DNAJC7Q99615 494 aa7.2□□□□□ -1.26
UBE2D3-225ENST00000508476 NGRNQ9NPE2 291 aaKnown RBP7.2□□□□□ -1.26
UBE2D3-225ENST00000508476 TCRBV5S4A2TA0A5A2 114 aa7.19□□□□□ -1.26
UBE2D3-225ENST00000508476 MAFKO60675 156 aa7.19□□□□□ -1.26
UBE2D3-225ENST00000508476 SUMO1P63165 101 aaKnown RBP7.19□□□□□ -1.26
UBE2D3-225ENST00000508476 SPIRE1Q08AE8 756 aa7.19□□□□□ -1.26
UBE2D3-225ENST00000508476 RGL3Q3MIN7 710 aa7.19□□□□□ -1.26
UBE2D3-225ENST00000508476 MCTP2Q6DN12 878 aa7.19□□□□□ -1.26
UBE2D3-225ENST00000508476 CYP4F22Q6NT55 531 aa7.19□□□□□ -1.26
UBE2D3-225ENST00000508476 CXorf38Q8TB03 319 aa7.19□□□□□ -1.26
UBE2D3-225ENST00000508476 SH3RF2Q8TEC5 729 aa7.19□□□□□ -1.26
UBE2D3-225ENST00000508476 SRPK1Q96SB4 655 aaKnown RBP7.19□□□□□ -1.26
UBE2D3-225ENST00000508476 DNAJC2Q99543 621 aaKnown RBP7.19□□□□□ -1.26
UBE2D3-225ENST00000508476 ALG1Q9BT22 464 aa7.19□□□□□ -1.26
UBE2D3-225ENST00000508476 KRTAP4-9Q9BYQ8 210 aa7.19□□□□□ -1.26
UBE2D3-225ENST00000508476 PCDHA8Q9Y5H6 950 aa7.19□□□□□ -1.26
UBE2D3-225ENST00000508476 FAM47E-STBD1D6RA91 191 aa7.18□□□□□ -1.26
UBE2D3-225ENST00000508476 SYN1P17600 705 aa7.18□□□□□ -1.26
UBE2D3-225ENST00000508476 CNR2P34972 360 aa7.18□□□□□ -1.26
UBE2D3-225ENST00000508476 MLLT6P55198 1093 aaPredicted RBP7.18□□□□□ -1.26
UBE2D3-225ENST00000508476 SKOR2Q2VWA4 1001 aaPredicted RBP7.18□□□□□ -1.26
UBE2D3-225ENST00000508476 MTDHQ86UE4 582 aaKnown RBP7.18□□□□□ -1.26
UBE2D3-225ENST00000508476 TTLL11Q8NHH1 800 aa7.18□□□□□ -1.26
UBE2D3-225ENST00000508476 PTPRN2Q92932 1015 aa7.18□□□□□ -1.26
UBE2D3-225ENST00000508476 DHRS4Q9BTZ2 278 aa7.18□□□□□ -1.26
UBE2D3-225ENST00000508476 CD244Q9BZW8 370 aa7.18□□□□□ -1.26
UBE2D3-225ENST00000508476 LNPKQ9C0E8 428 aa7.18□□□□□ -1.26
UBE2D3-225ENST00000508476 CROTQ9UKG9 612 aa7.18□□□□□ -1.26
UBE2D3-225ENST00000508476 DSEQ9UL01 958 aa7.18□□□□□ -1.26
UBE2D3-225ENST00000508476 MRPS23Q9Y3D9 190 aaKnown RBP7.18□□□□□ -1.26
UBE2D3-225ENST00000508476 PCDHA9Q9Y5H5 950 aa7.18□□□□□ -1.26
UBE2D3-225ENST00000508476 ZNF28P17035 718 aa7.17□□□□□ -1.26
UBE2D3-225ENST00000508476 MAMDC2Q7Z304 686 aaPredicted RBP7.17□□□□□ -1.26
UBE2D3-225ENST00000508476 TRIM48Q8IWZ4 208 aa7.17□□□□□ -1.26
UBE2D3-225ENST00000508476 TXNDC5Q8NBS9 432 aaKnown RBP7.17□□□□□ -1.26
UBE2D3-225ENST00000508476 PCDH19Q8TAB3 1148 aa7.17□□□□□ -1.26
UBE2D3-225ENST00000508476 KISS1RQ969F8 398 aaPredicted RBP7.17□□□□□ -1.26
UBE2D3-225ENST00000508476 BDH2Q9BUT1 245 aa7.17□□□□□ -1.26
UBE2D3-225ENST00000508476 AQP7O14520 342 aa7.16□□□□□ -1.26
UBE2D3-225ENST00000508476 GUCY1A3Q02108 690 aa7.16□□□□□ -1.26
UBE2D3-225ENST00000508476 PAK1Q13153 545 aa7.16□□□□□ -1.26
UBE2D3-225ENST00000508476 SF3A1Q15459 793 aaKnown RBP7.16□□□□□ -1.26
UBE2D3-225ENST00000508476 PAN2Q504Q3 1202 aaKnown RBP7.16□□□□□ -1.26
UBE2D3-225ENST00000508476 UBXN11Q5T124 520 aa7.16□□□□□ -1.26
UBE2D3-225ENST00000508476 PRAMEF18Q5VWM3 479 aa7.16□□□□□ -1.26
UBE2D3-225ENST00000508476 DPH6Q7L8W6 267 aa7.16□□□□□ -1.26
UBE2D3-225ENST00000508476 LRP10Q7Z4F1 713 aa7.16□□□□□ -1.26
UBE2D3-225ENST00000508476 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.16□□□□□ -1.26
UBE2D3-225ENST00000508476 ZCCHC14Q8WYQ9 949 aaKnown RBP7.16□□□□□ -1.26
UBE2D3-225ENST00000508476 CLIC6Q96NY7 704 aa7.16□□□□□ -1.26
UBE2D3-225ENST00000508476 IPO9Q96P70 1041 aaKnown RBP7.16□□□□□ -1.26
UBE2D3-225ENST00000508476 ACOT7O00154 380 aa7.15□□□□□ -1.26
UBE2D3-225ENST00000508476 SRGAP2CP0DJJ0 459 aa7.15□□□□□ -1.26
UBE2D3-225ENST00000508476 PYGMP11217 842 aa7.15□□□□□ -1.26
UBE2D3-225ENST00000508476 FAHP16930 419 aa7.15□□□□□ -1.26
UBE2D3-225ENST00000508476 IL13P35225 146 aa7.15□□□□□ -1.26
UBE2D3-225ENST00000508476 ZFYVE27Q5T4F4 411 aa7.15□□□□□ -1.26
UBE2D3-225ENST00000508476 KCTD1Q719H9 257 aa7.15□□□□□ -1.26
UBE2D3-225ENST00000508476 TMEM209Q96SK2 561 aa7.15□□□□□ -1.26
UBE2D3-225ENST00000508476 SLC52A2Q9HAB3 445 aa7.15□□□□□ -1.26
UBE2D3-225ENST00000508476 HSPBP1Q9NZL4 362 aa7.15□□□□□ -1.26
UBE2D3-225ENST00000508476 CBLCQ9ULV8 474 aa7.15□□□□□ -1.26
UBE2D3-225ENST00000508476 ARVCFO00192 962 aa7.14□□□□□ -1.27
UBE2D3-225ENST00000508476 CRTAMO95727 393 aa7.14□□□□□ -1.27
UBE2D3-225ENST00000508476 AMY2AP04746 511 aa7.14□□□□□ -1.27
UBE2D3-225ENST00000508476 AMY2BP19961 511 aa7.14□□□□□ -1.27
UBE2D3-225ENST00000508476 EPHA5P54756 1037 aa7.14□□□□□ -1.27
UBE2D3-225ENST00000508476 GABREP78334 506 aa7.14□□□□□ -1.27
UBE2D3-225ENST00000508476 LONRF2Q1L5Z9 754 aa7.14□□□□□ -1.27
UBE2D3-225ENST00000508476 FAM26FQ5R3K3 315 aa7.14□□□□□ -1.27
UBE2D3-225ENST00000508476 DTX3Q8N9I9 347 aa7.14□□□□□ -1.27
UBE2D3-225ENST00000508476 NDOR1Q9UHB4 597 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms