RNA–Protein interactions for RNA: ENST00000507297.5

TMEM173-206, Transcript of transmembrane protein 173, humanhuman

TSL 2

Gene TMEM173, Length 3,200 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM173-206ENST00000507297 LRRC1Q9BTT6 524 aa13.29□□□□□ -0.28
TMEM173-206ENST00000507297 TANGO6Q9C0B7 1094 aa13.29□□□□□ -0.28
TMEM173-206ENST00000507297 USP40Q9NVE5 1235 aa13.29□□□□□ -0.28
TMEM173-206ENST00000507297 SWAP70Q9UH65 585 aa13.29□□□□□ -0.28
TMEM173-206ENST00000507297 MYO3BQ8WXR4 1341 aa13.29□□□□□ -0.28
TMEM173-206ENST00000507297 POTEB3A0JP26 581 aa13.29□□□□□ -0.28
TMEM173-206ENST00000507297 KLRG2A4D1S0 409 aaPredicted RBP13.29□□□□□ -0.28
TMEM173-206ENST00000507297 POTECB2RU33 542 aa13.29□□□□□ -0.28
TMEM173-206ENST00000507297 RBAK-RBAKDNI3L0D1 243 aa13.29□□□□□ -0.28
TMEM173-206ENST00000507297 RASSF7Q02833 373 aa13.29□□□□□ -0.28
TMEM173-206ENST00000507297 FAM26FQ5R3K3 315 aa13.29□□□□□ -0.28
TMEM173-206ENST00000507297 POTEBQ6S5H4 581 aa13.29□□□□□ -0.28
TMEM173-206ENST00000507297 PSMB7Q99436 277 aa13.29□□□□□ -0.28
TMEM173-206ENST00000507297 ACBD3Q9H3P7 528 aa13.29□□□□□ -0.28
TMEM173-206ENST00000507297 DNAJC18Q9H819 358 aa13.29□□□□□ -0.28
TMEM173-206ENST00000507297 PSTPIP2Q9H939 334 aa13.29□□□□□ -0.28
TMEM173-206ENST00000507297 COL11A2P13942 1736 aaPredicted RBP13.28□□□□□ -0.28
TMEM173-206ENST00000507297 USP17L15C9J2P7 530 aa13.28□□□□□ -0.28
TMEM173-206ENST00000507297 USP17L13C9JLJ4 530 aa13.28□□□□□ -0.28
TMEM173-206ENST00000507297 USP17L11C9JVI0 530 aa13.28□□□□□ -0.28
TMEM173-206ENST00000507297 USP17L18D6R9N7 530 aa13.28□□□□□ -0.28
TMEM173-206ENST00000507297 USP17L22D6RA61 530 aa13.28□□□□□ -0.28
TMEM173-206ENST00000507297 USP17L17D6RBQ6 530 aa13.28□□□□□ -0.28
TMEM173-206ENST00000507297 USP17L19D6RCP7 530 aa13.28□□□□□ -0.28
TMEM173-206ENST00000507297 USP17L20D6RJB6 530 aa13.28□□□□□ -0.28
TMEM173-206ENST00000507297 CLGNO14967 610 aa13.28□□□□□ -0.28
TMEM173-206ENST00000507297 CAPN2P17655 700 aa13.28□□□□□ -0.28
TMEM173-206ENST00000507297 HOXA7P31268 230 aaPredicted RBP13.28□□□□□ -0.28
TMEM173-206ENST00000507297 MRPS25P82663 173 aaKnown RBP13.28□□□□□ -0.28
TMEM173-206ENST00000507297 FKBP3Q00688 224 aaKnown RBP13.28□□□□□ -0.28
TMEM173-206ENST00000507297 USP17L24Q0WX57 530 aa13.28□□□□□ -0.28
TMEM173-206ENST00000507297 KLHDC7AQ5VTJ3 777 aa13.28□□□□□ -0.28
TMEM173-206ENST00000507297 CDC42EP5Q6NZY7 148 aa13.28□□□□□ -0.28
TMEM173-206ENST00000507297 USP17L6PQ6QN14 398 aa13.28□□□□□ -0.28
TMEM173-206ENST00000507297 ZFPM1Q8IX07 1006 aa13.28□□□□□ -0.28
TMEM173-206ENST00000507297 SPATA4Q8NEY3 305 aa13.28□□□□□ -0.28
TMEM173-206ENST00000507297 KCTD10Q9H3F6 313 aa13.28□□□□□ -0.28
TMEM173-206ENST00000507297 KANSL2Q9H9L4 492 aa13.28□□□□□ -0.28
TMEM173-206ENST00000507297 NLRC4Q9NPP4 1024 aa13.28□□□□□ -0.28
TMEM173-206ENST00000507297 CEP72Q9P209 647 aa13.28□□□□□ -0.28
TMEM173-206ENST00000507297 DMGDHQ9UI17 866 aaKnown RBP13.28□□□□□ -0.28
TMEM173-206ENST00000507297 PCDHA12Q9UN75 941 aa13.28□□□□□ -0.28
TMEM173-206ENST00000507297 TRAF5O00463 557 aa13.28□□□□□ -0.28
TMEM173-206ENST00000507297 BUB1O43683 1085 aa13.28□□□□□ -0.28
TMEM173-206ENST00000507297 GGCXP38435 758 aa13.28□□□□□ -0.28
TMEM173-206ENST00000507297 MAGEA1P43355 309 aa13.28□□□□□ -0.28
TMEM173-206ENST00000507297 ITIH3Q06033 890 aa13.28□□□□□ -0.28
TMEM173-206ENST00000507297 SEPT2Q15019 361 aa13.28□□□□□ -0.28
TMEM173-206ENST00000507297 NELFCDQ8IXH7 590 aa13.28□□□□□ -0.28
TMEM173-206ENST00000507297 TLR10Q9BXR5 811 aa13.28□□□□□ -0.28
TMEM173-206ENST00000507297 KCNMB3Q9NPA1 279 aa13.28□□□□□ -0.28
TMEM173-206ENST00000507297 KIAA1024Q9UPX6 916 aa13.28□□□□□ -0.28
TMEM173-206ENST00000507297 HYOU1Q9Y4L1 999 aa13.28□□□□□ -0.28
TMEM173-206ENST00000507297 SSU72P8A0A1W2PR75 194 aa13.28□□□□□ -0.28
TMEM173-206ENST00000507297 MPHOSPH10O00566 681 aaKnown RBP13.28□□□□□ -0.28
TMEM173-206ENST00000507297 TOM1O60784 492 aa13.28□□□□□ -0.28
TMEM173-206ENST00000507297 STAT3P40763 770 aa13.28□□□□□ -0.28
TMEM173-206ENST00000507297 NFIAQ12857 509 aa13.28□□□□□ -0.28
TMEM173-206ENST00000507297 CCDC40Q4G0X9 1142 aa13.28□□□□□ -0.28
TMEM173-206ENST00000507297 IQCEQ6IPM2 695 aa13.28□□□□□ -0.28
TMEM173-206ENST00000507297 FOXR1Q6PIV2 292 aa13.28□□□□□ -0.28
TMEM173-206ENST00000507297 CACNA2D4Q7Z3S7 1137 aa13.28□□□□□ -0.28
TMEM173-206ENST00000507297 ZC3H3Q8IXZ2 948 aaKnown RBP13.28□□□□□ -0.28
TMEM173-206ENST00000507297 SP8Q8IXZ3 490 aa13.28□□□□□ -0.28
TMEM173-206ENST00000507297 SCFD1Q8WVM8 642 aa13.28□□□□□ -0.28
TMEM173-206ENST00000507297 P2RX7Q99572 595 aaKnown RBP13.28□□□□□ -0.28
TMEM173-206ENST00000507297 LSM14BQ9BX40 385 aaKnown RBP13.28□□□□□ -0.28
TMEM173-206ENST00000507297 EDEM3Q9BZQ6 932 aa13.28□□□□□ -0.28
TMEM173-206ENST00000507297 COA1Q9GZY4 146 aa13.28□□□□□ -0.28
TMEM173-206ENST00000507297 KDM3AQ9Y4C1 1321 aa13.27□□□□□ -0.28
TMEM173-206ENST00000507297 MED24O75448 989 aa13.27□□□□□ -0.28
TMEM173-206ENST00000507297 PLA2G4BP0C869 781 aa13.27□□□□□ -0.28
TMEM173-206ENST00000507297 GCFC2P16383 781 aaKnown RBP13.27□□□□□ -0.28
TMEM173-206ENST00000507297 MRPL12P52815 198 aaKnown RBP13.27□□□□□ -0.28
TMEM173-206ENST00000507297 MARSP56192 900 aaKnown RBP13.27□□□□□ -0.28
TMEM173-206ENST00000507297 ARSHQ5FYA8 562 aa13.27□□□□□ -0.28
TMEM173-206ENST00000507297 FAM83BQ5T0W9 1011 aa13.27□□□□□ -0.28
TMEM173-206ENST00000507297 GPATCH4Q5T3I0 446 aaKnown RBP13.27□□□□□ -0.28
TMEM173-206ENST00000507297 ALS2CR12Q96Q35 445 aa13.27□□□□□ -0.28
TMEM173-206ENST00000507297 SUGT1Q9Y2Z0 365 aa13.27□□□□□ -0.28
TMEM173-206ENST00000507297 RPS6KA5O75582 802 aa13.27□□□□□ -0.29
TMEM173-206ENST00000507297 SSBP05455 408 aaKnown RBP eCLIP13.27□□□□□ -0.29
TMEM173-206ENST00000507297 CYP11B2P19099 503 aa13.27□□□□□ -0.29
TMEM173-206ENST00000507297 SLC7A5Q01650 507 aa13.27□□□□□ -0.29
TMEM173-206ENST00000507297 QRICH1Q2TAL8 776 aa13.27□□□□□ -0.29
TMEM173-206ENST00000507297 HAUS3Q68CZ6 603 aa13.27□□□□□ -0.29
TMEM173-206ENST00000507297 APOBEC3HQ6NTF7 200 aaKnown RBP13.27□□□□□ -0.29
TMEM173-206ENST00000507297 GPBP1Q86WP2 473 aa13.27□□□□□ -0.29
TMEM173-206ENST00000507297 TRIM59Q8IWR1 403 aa13.27□□□□□ -0.29
TMEM173-206ENST00000507297 NT5C3AQ9H0P0 336 aa13.27□□□□□ -0.29
TMEM173-206ENST00000507297 LCMT1Q9UIC8 334 aa13.27□□□□□ -0.29
TMEM173-206ENST00000507297 FRMD3A2A2Y4 597 aa13.26□□□□□ -0.29
TMEM173-206ENST00000507297 SLC12A3P55017 1021 aa13.26□□□□□ -0.29
TMEM173-206ENST00000507297 DOK7Q18PE1 504 aa13.26□□□□□ -0.29
TMEM173-206ENST00000507297 CEP63Q96MT8 703 aa13.26□□□□□ -0.29
TMEM173-206ENST00000507297 PCDHAC2Q9Y5I4 1007 aa13.26□□□□□ -0.29
TMEM173-206ENST00000507297 CASP5P51878 434 aa13.26□□□□□ -0.29
TMEM173-206ENST00000507297 POLR2FP61218 127 aaKnown RBP13.26□□□□□ -0.29
TMEM173-206ENST00000507297 TDRD12Q587J7 1177 aaKnown RBP13.26□□□□□ -0.29
TMEM173-206ENST00000507297 SFMBT2Q5VUG0 894 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms