RNA–Protein interactions for RNA: ENST00000506679.5

GYPB-207, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 606 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-207ENST00000506679 B4E1Z4 1266 aa4.26□□□□□ -1.73
GYPB-207ENST00000506679 MAN2B1O00754 1011 aa4.26□□□□□ -1.73
GYPB-207ENST00000506679 SLC27A2O14975 620 aa4.26□□□□□ -1.73
GYPB-207ENST00000506679 GSTA4O15217 222 aa4.26□□□□□ -1.73
GYPB-207ENST00000506679 SMARCA5O60264 1052 aaPredicted RBP4.26□□□□□ -1.73
GYPB-207ENST00000506679 C1QTNF9P0C862 333 aa4.26□□□□□ -1.73
GYPB-207ENST00000506679 SRGAP2CP0DJJ0 459 aa4.26□□□□□ -1.73
GYPB-207ENST00000506679 COL6A2P12110 1019 aa4.26□□□□□ -1.73
GYPB-207ENST00000506679 PDE6AP16499 860 aa4.26□□□□□ -1.73
GYPB-207ENST00000506679 MC3RP41968 323 aa4.26□□□□□ -1.73
GYPB-207ENST00000506679 CACNB2Q08289 660 aaPredicted RBP4.26□□□□□ -1.73
GYPB-207ENST00000506679 TARBP2Q15633 366 aaKnown RBP4.26□□□□□ -1.73
GYPB-207ENST00000506679 CR1LQ2VPA4 569 aa4.26□□□□□ -1.73
GYPB-207ENST00000506679 TMEM177Q53S58 311 aa4.26□□□□□ -1.73
GYPB-207ENST00000506679 FIGNQ5HY92 759 aa4.26□□□□□ -1.73
GYPB-207ENST00000506679 HHIPL2Q6UWX4 724 aa4.26□□□□□ -1.73
GYPB-207ENST00000506679 ETV3LQ6ZN32 361 aa4.26□□□□□ -1.73
GYPB-207ENST00000506679 KCTD1Q719H9 257 aa4.26□□□□□ -1.73
GYPB-207ENST00000506679 OTOP1Q7RTM1 612 aa4.26□□□□□ -1.73
GYPB-207ENST00000506679 B3GNT8Q7Z7M8 397 aa4.26□□□□□ -1.73
GYPB-207ENST00000506679 ANKLE2Q86XL3 938 aa4.26□□□□□ -1.73
GYPB-207ENST00000506679 TRIM48Q8IWZ4 208 aa4.26□□□□□ -1.73
GYPB-207ENST00000506679 ARRDC4Q8NCT1 418 aa4.26□□□□□ -1.73
GYPB-207ENST00000506679 PANK1Q8TE04 598 aa4.26□□□□□ -1.73
GYPB-207ENST00000506679 CLEC4DQ8WXI8 215 aa4.26□□□□□ -1.73
GYPB-207ENST00000506679 KCNN1Q92952 543 aa4.26□□□□□ -1.73
GYPB-207ENST00000506679 MFSD3Q96ES6 412 aa4.26□□□□□ -1.73
GYPB-207ENST00000506679 SIGLEC10Q96LC7 697 aa4.26□□□□□ -1.73
GYPB-207ENST00000506679 EPB41L4AQ9HCS5 686 aaPredicted RBP4.26□□□□□ -1.73
GYPB-207ENST00000506679 DTLQ9NZJ0 730 aa4.26□□□□□ -1.73
GYPB-207ENST00000506679 DSEQ9UL01 958 aa4.26□□□□□ -1.73
GYPB-207ENST00000506679 A0A087X0B3 334 aa4.25□□□□□ -1.73
GYPB-207ENST00000506679 OPA1O60313 960 aa4.25□□□□□ -1.73
GYPB-207ENST00000506679 BUB1BO60566 1050 aaPredicted RBP4.25□□□□□ -1.73
GYPB-207ENST00000506679 GLRX3O76003 335 aaKnown RBP4.25□□□□□ -1.73
GYPB-207ENST00000506679 LTFP02788 710 aa4.25□□□□□ -1.73
GYPB-207ENST00000506679 C8AP07357 584 aa4.25□□□□□ -1.73
GYPB-207ENST00000506679 C8BP07358 591 aa4.25□□□□□ -1.73
GYPB-207ENST00000506679 TMEM253P0C7T8 217 aa4.25□□□□□ -1.73
GYPB-207ENST00000506679 YBX3P16989 372 aaKnown RBP eCLIP4.25□□□□□ -1.736e-7■■■□□ 14.8
GYPB-207ENST00000506679 PFKLP17858 780 aa4.25□□□□□ -1.73
GYPB-207ENST00000506679 GYS2P54840 703 aa4.25□□□□□ -1.73
GYPB-207ENST00000506679 NCKAP1LP55160 1127 aa4.25□□□□□ -1.73
GYPB-207ENST00000506679 JAM2P57087 298 aa4.25□□□□□ -1.73
GYPB-207ENST00000506679 ST5P78524 1137 aa4.25□□□□□ -1.73
GYPB-207ENST00000506679 HTRA3P83110 453 aa4.25□□□□□ -1.73
GYPB-207ENST00000506679 CAP1Q01518 475 aa4.25□□□□□ -1.73
GYPB-207ENST00000506679 TUSC3Q13454 348 aa4.25□□□□□ -1.73
GYPB-207ENST00000506679 CRY1Q16526 586 aa4.25□□□□□ -1.73
GYPB-207ENST00000506679 C21orf62-AS1Q17RA5 79 aa4.25□□□□□ -1.73
GYPB-207ENST00000506679 TMEM132EQ6IEE7 984 aa4.25□□□□□ -1.73
GYPB-207ENST00000506679 ATG14Q6ZNE5 492 aa4.25□□□□□ -1.73
GYPB-207ENST00000506679 ARHGAP36Q6ZRI8 547 aa4.25□□□□□ -1.73
GYPB-207ENST00000506679 LRRTM3Q86VH5 581 aa4.25□□□□□ -1.73
GYPB-207ENST00000506679 OSTM1Q86WC4 334 aa4.25□□□□□ -1.73
GYPB-207ENST00000506679 NOSTRINQ8IVI9 506 aa4.25□□□□□ -1.73
GYPB-207ENST00000506679 IGSF22Q8N9C0 903 aa4.25□□□□□ -1.73
GYPB-207ENST00000506679 DDX1Q92499 740 aaKnown RBP4.25□□□□□ -1.73
GYPB-207ENST00000506679 SLC38A3Q99624 504 aa4.25□□□□□ -1.73
GYPB-207ENST00000506679 CATSPERZQ9NTU4 200 aa4.25□□□□□ -1.73
GYPB-207ENST00000506679 NUB1Q9Y5A7 615 aa4.25□□□□□ -1.73
GYPB-207ENST00000506679 GSG1L2A8MUP6 293 aa4.24□□□□□ -1.73
GYPB-207ENST00000506679 CBX4O00257 560 aa4.24□□□□□ -1.73
GYPB-207ENST00000506679 TRAF5O00463 557 aa4.24□□□□□ -1.73
GYPB-207ENST00000506679 NFIBO00712 420 aa4.24□□□□□ -1.73
GYPB-207ENST00000506679 CLASP2O75122 1294 aaKnown RBP4.24□□□□□ -1.73
GYPB-207ENST00000506679 LRG1P02750 347 aa4.24□□□□□ -1.73
GYPB-207ENST00000506679 APPP05067 770 aa4.24□□□□□ -1.73
GYPB-207ENST00000506679 JMJD7P0C870 316 aa4.24□□□□□ -1.73
GYPB-207ENST00000506679 DNM2P50570 870 aa4.24□□□□□ -1.73
GYPB-207ENST00000506679 SSPNQ14714 243 aa4.24□□□□□ -1.73
GYPB-207ENST00000506679 FSTL4Q6MZW2 842 aa4.24□□□□□ -1.73
GYPB-207ENST00000506679 TEPPQ6URK8 271 aa4.24□□□□□ -1.73
GYPB-207ENST00000506679 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.24□□□□□ -1.73
GYPB-207ENST00000506679 DDX53Q86TM3 631 aaKnown RBP4.24□□□□□ -1.73
GYPB-207ENST00000506679 PROSER1Q86XN7 944 aa4.24□□□□□ -1.73
GYPB-207ENST00000506679 FAM129CQ86XR2 697 aa4.24□□□□□ -1.73
GYPB-207ENST00000506679 PTRH1Q86Y79 214 aaKnown RBP4.24□□□□□ -1.73
GYPB-207ENST00000506679 RBM12BQ8IXT5 1001 aaKnown RBP4.24□□□□□ -1.73
GYPB-207ENST00000506679 DHX37Q8IY37 1157 aaKnown RBP4.24□□□□□ -1.73
GYPB-207ENST00000506679 NLGN4XQ8N0W4 816 aa4.24□□□□□ -1.73
GYPB-207ENST00000506679 CISD2Q8N5K1 135 aaKnown RBP4.24□□□□□ -1.73
GYPB-207ENST00000506679 LINC00482Q8N8I6 264 aa4.24□□□□□ -1.73
GYPB-207ENST00000506679 TARS2Q9BW92 718 aaKnown RBP4.24□□□□□ -1.73
GYPB-207ENST00000506679 CD244Q9BZW8 370 aa4.24□□□□□ -1.73
GYPB-207ENST00000506679 MTFR1LQ9H019 292 aa4.24□□□□□ -1.73
GYPB-207ENST00000506679 NGRNQ9NPE2 291 aaKnown RBP4.24□□□□□ -1.73
GYPB-207ENST00000506679 SAMD15Q9P1V8 674 aa4.24□□□□□ -1.73
GYPB-207ENST00000506679 SMG5Q9UPR3 1016 aaKnown RBP4.24□□□□□ -1.73
GYPB-207ENST00000506679 IRAK3Q9Y616 596 aa4.24□□□□□ -1.73
GYPB-207ENST00000506679 TCAF2A6NFQ2 919 aa4.23□□□□□ -1.73
GYPB-207ENST00000506679 FAM90A27PA6NNH2 459 aa4.23□□□□□ -1.73
GYPB-207ENST00000506679 M0R2C6 588 aa4.23□□□□□ -1.73
GYPB-207ENST00000506679 ACOT7O00154 380 aa4.23□□□□□ -1.73
GYPB-207ENST00000506679 PLA2G1BP04054 148 aaKnown RBP4.23□□□□□ -1.73
GYPB-207ENST00000506679 ZBTB48P10074 688 aaPredicted RBP4.23□□□□□ -1.73
GYPB-207ENST00000506679 FAHP16930 419 aa4.23□□□□□ -1.73
GYPB-207ENST00000506679 GJA4P35212 333 aa4.23□□□□□ -1.73
GYPB-207ENST00000506679 LINC00310P59036 64 aa4.23□□□□□ -1.73
GYPB-207ENST00000506679 FOXO4P98177 505 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms