RNA–Protein interactions for RNA: ENST00000505589.1

NEDD9-210, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 2

Gene NEDD9, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-210ENST00000505589 SPRED2Q7Z698 418 aa11.51□□□□□ -0.57
NEDD9-210ENST00000505589 TBC1D5Q92609 795 aa11.51□□□□□ -0.57
NEDD9-210ENST00000505589 KRT23Q9C075 422 aa11.51□□□□□ -0.57
NEDD9-210ENST00000505589 RNPEPQ9H4A4 650 aa11.51□□□□□ -0.57
NEDD9-210ENST00000505589 VAT1LQ9HCJ6 419 aa11.51□□□□□ -0.57
NEDD9-210ENST00000505589 PIEZO1Q92508 2521 aa11.5□□□□□ -0.57
NEDD9-210ENST00000505589 TRIM6-TRIM34B2RNG4 842 aa11.5□□□□□ -0.57
NEDD9-210ENST00000505589 FOXP2O15409 715 aa11.5□□□□□ -0.57
NEDD9-210ENST00000505589 ZNF286BP0CG31 522 aa11.5□□□□□ -0.57
NEDD9-210ENST00000505589 HSD17B4P51659 736 aa11.5□□□□□ -0.57
NEDD9-210ENST00000505589 CTC1Q2NKJ3 1217 aa11.5□□□□□ -0.57
NEDD9-210ENST00000505589 QRICH1Q2TAL8 776 aa11.5□□□□□ -0.57
NEDD9-210ENST00000505589 HSDL1Q3SXM5 330 aa11.5□□□□□ -0.57
NEDD9-210ENST00000505589 ANKRD45Q5TZF3 282 aa11.5□□□□□ -0.57
NEDD9-210ENST00000505589 SUGP1Q8IWZ8 645 aaKnown RBP11.5□□□□□ -0.57
NEDD9-210ENST00000505589 GIMAP8Q8ND71 665 aaPredicted RBP11.5□□□□□ -0.57
NEDD9-210ENST00000505589 EDAQ92838 391 aa11.5□□□□□ -0.57
NEDD9-210ENST00000505589 ZSCAN10Q96SZ4 725 aaPredicted RBP11.5□□□□□ -0.57
NEDD9-210ENST00000505589 PDCD2LQ9BRP1 358 aa11.5□□□□□ -0.57
NEDD9-210ENST00000505589 C16orf70Q9BSU1 422 aa11.5□□□□□ -0.57
NEDD9-210ENST00000505589 CNNM2Q9H8M5 875 aa11.5□□□□□ -0.57
NEDD9-210ENST00000505589 PCDHA1Q9Y5I3 950 aa11.5□□□□□ -0.57
NEDD9-210ENST00000505589 CCDC171Q6TFL3 1326 aa11.5□□□□□ -0.57
NEDD9-210ENST00000505589 MUC6Q6W4X9 2439 aa11.49□□□□□ -0.57
NEDD9-210ENST00000505589 SIP14410 1827 aa11.49□□□□□ -0.57
NEDD9-210ENST00000505589 LCTP09848 1927 aa11.49□□□□□ -0.57
NEDD9-210ENST00000505589 GCOM1H8Y6P7 765 aaPredicted RBP11.49□□□□□ -0.57
NEDD9-210ENST00000505589 HIP1O00291 1037 aa11.49□□□□□ -0.57
NEDD9-210ENST00000505589 ZBTB5O15062 677 aa11.49□□□□□ -0.57
NEDD9-210ENST00000505589 ST18O60284 1047 aa11.49□□□□□ -0.57
NEDD9-210ENST00000505589 POLR2MP0CAP2 368 aa11.49□□□□□ -0.57
NEDD9-210ENST00000505589 CTNNB1P35222 781 aa11.49□□□□□ -0.57
NEDD9-210ENST00000505589 HAND2P61296 217 aa11.49□□□□□ -0.57
NEDD9-210ENST00000505589 ZNF200P98182 395 aaPredicted RBP11.49□□□□□ -0.57
NEDD9-210ENST00000505589 MKRN4PQ13434 485 aaPredicted RBP11.49□□□□□ -0.57
NEDD9-210ENST00000505589 SMAD4Q13485 552 aaKnown RBP11.49□□□□□ -0.57
NEDD9-210ENST00000505589 MBTPS1Q14703 1052 aa11.49□□□□□ -0.57
NEDD9-210ENST00000505589 PGM5Q15124 567 aa11.49□□□□□ -0.57
NEDD9-210ENST00000505589 TAF2Q6P1X5 1199 aa11.49□□□□□ -0.57
NEDD9-210ENST00000505589 RPAINQ86UA6 219 aa11.49□□□□□ -0.57
NEDD9-210ENST00000505589 P2RX5Q93086 422 aa11.49□□□□□ -0.57
NEDD9-210ENST00000505589 JMJD4Q9H9V9 463 aa11.49□□□□□ -0.57
NEDD9-210ENST00000505589 COL20A1Q9P218 1284 aa11.49□□□□□ -0.57
NEDD9-210ENST00000505589 NRCAMQ92823 1304 aa11.49□□□□□ -0.57
NEDD9-210ENST00000505589 STXBP3O00186 592 aa11.48□□□□□ -0.57
NEDD9-210ENST00000505589 TREHO43280 583 aa11.48□□□□□ -0.57
NEDD9-210ENST00000505589 MBTPS2O43462 519 aa11.48□□□□□ -0.57
NEDD9-210ENST00000505589 SMIM10L2AP0DMW4 78 aa11.48□□□□□ -0.57
NEDD9-210ENST00000505589 SMIM10L2BP0DMW5 78 aa11.48□□□□□ -0.57
NEDD9-210ENST00000505589 HOXC8P31273 242 aa11.48□□□□□ -0.57
NEDD9-210ENST00000505589 IRS1P35568 1242 aa11.48□□□□□ -0.57
NEDD9-210ENST00000505589 NUBP1P53384 320 aa11.48□□□□□ -0.57
NEDD9-210ENST00000505589 PDE1AP54750 535 aa11.48□□□□□ -0.57
NEDD9-210ENST00000505589 FOXK2Q01167 660 aa11.48□□□□□ -0.57
NEDD9-210ENST00000505589 IMMTQ16891 758 aaKnown RBP11.48□□□□□ -0.57
NEDD9-210ENST00000505589 FAM26DQ5JW98 314 aa11.48□□□□□ -0.57
NEDD9-210ENST00000505589 IFIT1BQ5T764 474 aaKnown RBP11.48□□□□□ -0.57
NEDD9-210ENST00000505589 C20orf194Q5TEA3 1177 aa11.48□□□□□ -0.57
NEDD9-210ENST00000505589 HFE2Q6ZVN8 426 aa11.48□□□□□ -0.57
NEDD9-210ENST00000505589 PBXIP1Q96AQ6 731 aa11.48□□□□□ -0.57
NEDD9-210ENST00000505589 SENP7Q9BQF6 1050 aa11.48□□□□□ -0.57
NEDD9-210ENST00000505589 ZKSCAN3Q9BRR0 538 aa11.48□□□□□ -0.57
NEDD9-210ENST00000505589 UBAC1Q9BSL1 405 aa11.48□□□□□ -0.57
NEDD9-210ENST00000505589 FTHL17Q9BXU8 183 aa11.48□□□□□ -0.57
NEDD9-210ENST00000505589 CD207Q9UJ71 328 aa11.48□□□□□ -0.57
NEDD9-210ENST00000505589 SQORQ9Y6N5 450 aa11.48□□□□□ -0.57
NEDD9-210ENST00000505589 KLRF2D3W0D1 207 aa11.47□□□□□ -0.57
NEDD9-210ENST00000505589 KDM4AO75164 1064 aa11.47□□□□□ -0.57
NEDD9-210ENST00000505589 LGALS2P05162 132 aa11.47□□□□□ -0.57
NEDD9-210ENST00000505589 STAG3L1P0CL83 205 aa11.47□□□□□ -0.57
NEDD9-210ENST00000505589 ICAM3P32942 547 aa11.47□□□□□ -0.57
NEDD9-210ENST00000505589 BTG3Q14201 252 aaPredicted RBP11.47□□□□□ -0.57
NEDD9-210ENST00000505589 TCTN1Q2MV58 587 aa11.47□□□□□ -0.57
NEDD9-210ENST00000505589 XRRA1Q6P2D8 792 aa11.47□□□□□ -0.57
NEDD9-210ENST00000505589 METTL7BQ6UX53 244 aa11.47□□□□□ -0.57
NEDD9-210ENST00000505589 RNF135Q8IUD6 432 aa11.47□□□□□ -0.57
NEDD9-210ENST00000505589 CLP1Q92989 425 aaKnown RBP11.47□□□□□ -0.57
NEDD9-210ENST00000505589 WNT8BQ93098 351 aa11.47□□□□□ -0.57
NEDD9-210ENST00000505589 CDHR1Q96JP9 859 aa11.47□□□□□ -0.57
NEDD9-210ENST00000505589 FAM227BQ96M60 508 aa11.47□□□□□ -0.57
NEDD9-210ENST00000505589 ZSWIM5Q9P217 1185 aa11.47□□□□□ -0.57
NEDD9-210ENST00000505589 KIAA1217Q5T5P2 1943 aa11.47□□□□□ -0.57
NEDD9-210ENST00000505589 BRWD1Q9NSI6 2320 aa11.46□□□□□ -0.57
NEDD9-210ENST00000505589 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.46□□□□□ -0.57
NEDD9-210ENST00000505589 ERICH2A1L162 156 aa11.46□□□□□ -0.57
NEDD9-210ENST00000505589 FIBPO43427 364 aa11.46□□□□□ -0.57
NEDD9-210ENST00000505589 RGS20O76081 388 aa11.46□□□□□ -0.57
NEDD9-210ENST00000505589 EYA4O95677 639 aa11.46□□□□□ -0.57
NEDD9-210ENST00000505589 MMP1P03956 469 aa11.46□□□□□ -0.57
NEDD9-210ENST00000505589 UBA1P22314 1058 aaKnown RBP11.46□□□□□ -0.57
NEDD9-210ENST00000505589 LTBRP36941 435 aa11.46□□□□□ -0.57
NEDD9-210ENST00000505589 NDUFV1P49821 464 aa11.46□□□□□ -0.57
NEDD9-210ENST00000505589 SP2Q02086 613 aa11.46□□□□□ -0.57
NEDD9-210ENST00000505589 TRDNQ13061 729 aa11.46□□□□□ -0.57
NEDD9-210ENST00000505589 NMIQ13287 307 aaPredicted RBP11.46□□□□□ -0.57
NEDD9-210ENST00000505589 ADAM15Q13444 863 aa11.46□□□□□ -0.57
NEDD9-210ENST00000505589 IER5Q5VY09 327 aa11.46□□□□□ -0.57
NEDD9-210ENST00000505589 TRIM67Q6ZTA4 783 aa11.46□□□□□ -0.57
NEDD9-210ENST00000505589 NLRX1Q86UT6 975 aa11.46□□□□□ -0.57
NEDD9-210ENST00000505589 OTUD7AQ8TE49 926 aaPredicted RBP11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms