RNA–Protein interactions for RNA: ENST00000505583.5

GYPB-205, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-205ENST00000505583 C16orf70Q9BSU1 422 aa6.82□□□□□ -1.32
GYPB-205ENST00000505583 SLC24A3Q9HC58 644 aa6.82□□□□□ -1.32
GYPB-205ENST00000505583 C11orf16Q9NQ32 467 aa6.82□□□□□ -1.32
GYPB-205ENST00000505583 MAD2L2Q9UI95 211 aa6.82□□□□□ -1.32
GYPB-205ENST00000505583 MRPL11Q9Y3B7 192 aaKnown RBP6.82□□□□□ -1.32
GYPB-205ENST00000505583 MRVI1Q9Y6F6 885 aa6.82□□□□□ -1.32
GYPB-205ENST00000505583 BDP1A6H8Y1 2624 aa6.82□□□□□ -1.32
GYPB-205ENST00000505583 PALM3A6NDB9 673 aaPredicted RBP6.81□□□□□ -1.32
GYPB-205ENST00000505583 KIF28PB7ZC32 967 aa6.81□□□□□ -1.32
GYPB-205ENST00000505583 KLRF2D3W0D1 207 aa6.81□□□□□ -1.32
GYPB-205ENST00000505583 CYTH3O43739 400 aa6.81□□□□□ -1.32
GYPB-205ENST00000505583 GGPS1O95749 300 aa6.81□□□□□ -1.32
GYPB-205ENST00000505583 UBA1P22314 1058 aaKnown RBP6.81□□□□□ -1.32
GYPB-205ENST00000505583 KCNJ6P48051 423 aa6.81□□□□□ -1.32
GYPB-205ENST00000505583 MFAP1P55081 439 aaKnown RBP6.81□□□□□ -1.32
GYPB-205ENST00000505583 ERVK-21P61565 698 aa6.81□□□□□ -1.32
GYPB-205ENST00000505583 PTK7Q13308 1070 aa6.81□□□□□ -1.32
GYPB-205ENST00000505583 LAMC2Q13753 1193 aa6.81□□□□□ -1.32
GYPB-205ENST00000505583 COL9A3Q14050 684 aaPredicted RBP6.81□□□□□ -1.32
GYPB-205ENST00000505583 PGM5Q15124 567 aa6.81□□□□□ -1.32
GYPB-205ENST00000505583 IMMTQ16891 758 aaKnown RBP6.81□□□□□ -1.32
GYPB-205ENST00000505583 CELF3Q5SZQ8 465 aaKnown RBP6.81□□□□□ -1.32
GYPB-205ENST00000505583 STOX1Q6ZVD7 989 aa6.81□□□□□ -1.32
GYPB-205ENST00000505583 VSIG10LQ86VR7 867 aa6.81□□□□□ -1.32
GYPB-205ENST00000505583 HOMER1Q86YM7 354 aa6.81□□□□□ -1.32
GYPB-205ENST00000505583 HOMEZQ8IX15 550 aa6.81□□□□□ -1.32
GYPB-205ENST00000505583 DHX37Q8IY37 1157 aaKnown RBP6.81□□□□□ -1.32
GYPB-205ENST00000505583 DBF4BQ8NFT6 615 aa6.81□□□□□ -1.32
GYPB-205ENST00000505583 EXOC6Q8TAG9 804 aa6.81□□□□□ -1.32
GYPB-205ENST00000505583 HLA-CQ95604 372 aa6.81□□□□□ -1.32
GYPB-205ENST00000505583 PIGSQ96S52 555 aa6.81□□□□□ -1.32
GYPB-205ENST00000505583 C17orf80Q9BSJ5 609 aa6.81□□□□□ -1.32
GYPB-205ENST00000505583 ZBED2Q9BTP6 218 aa6.81□□□□□ -1.32
GYPB-205ENST00000505583 DSCC1Q9BVC3 393 aa6.81□□□□□ -1.32
GYPB-205ENST00000505583 AMNQ9BXJ7 453 aa6.81□□□□□ -1.32
GYPB-205ENST00000505583 DIAPH3Q9NSV4 1193 aa6.81□□□□□ -1.32
GYPB-205ENST00000505583 ABHD14A-ACY1A0A1B0GW23 586 aa6.8□□□□□ -1.32
GYPB-205ENST00000505583 ZBTB5O15062 677 aa6.8□□□□□ -1.32
GYPB-205ENST00000505583 PPFIA4O75335 1185 aa6.8□□□□□ -1.32
GYPB-205ENST00000505583 LGR5O75473 907 aa6.8□□□□□ -1.32
GYPB-205ENST00000505583 GSPT1P15170 499 aaKnown RBP6.8□□□□□ -1.32
GYPB-205ENST00000505583 HOXC8P31273 242 aa6.8□□□□□ -1.32
GYPB-205ENST00000505583 THPOP40225 353 aa6.8□□□□□ -1.32
GYPB-205ENST00000505583 MRPS9P82933 396 aaKnown RBP6.8□□□□□ -1.32
GYPB-205ENST00000505583 PTH1RQ03431 593 aa6.8□□□□□ -1.32
GYPB-205ENST00000505583 SEMA3FQ13275 785 aa6.8□□□□□ -1.32
GYPB-205ENST00000505583 AAK1Q2M2I8 961 aa6.8□□□□□ -1.32
GYPB-205ENST00000505583 CCDC178Q5BJE1 867 aa6.8□□□□□ -1.32
GYPB-205ENST00000505583 IFIT1BQ5T764 474 aaKnown RBP6.8□□□□□ -1.32
GYPB-205ENST00000505583 SERINC5Q86VE9 423 aa6.8□□□□□ -1.32
GYPB-205ENST00000505583 FCHSD1Q86WN1 690 aa6.8□□□□□ -1.32
GYPB-205ENST00000505583 TRIM50Q86XT4 487 aa6.8□□□□□ -1.32
GYPB-205ENST00000505583 CCDC155Q8N6L0 562 aa6.8□□□□□ -1.32
GYPB-205ENST00000505583 PDCD7Q8N8D1 485 aaKnown RBP6.8□□□□□ -1.32
GYPB-205ENST00000505583 DDX27Q96GQ7 796 aaKnown RBP6.8□□□□□ -1.32
GYPB-205ENST00000505583 SPATA33Q96N06 139 aa6.8□□□□□ -1.32
GYPB-205ENST00000505583 RAD9AQ99638 391 aa6.8□□□□□ -1.32
GYPB-205ENST00000505583 UBAC1Q9BSL1 405 aa6.8□□□□□ -1.32
GYPB-205ENST00000505583 LRFN3Q9BTN0 628 aa6.8□□□□□ -1.32
GYPB-205ENST00000505583 KRT23Q9C075 422 aa6.8□□□□□ -1.32
GYPB-205ENST00000505583 MAF1Q9H063 256 aa6.8□□□□□ -1.32
GYPB-205ENST00000505583 RWDD1Q9H446 243 aaPredicted RBP6.8□□□□□ -1.32
GYPB-205ENST00000505583 COG5Q9UP83 839 aa6.8□□□□□ -1.32
GYPB-205ENST00000505583 SUPT16HQ9Y5B9 1047 aaKnown RBP6.8□□□□□ -1.32
GYPB-205ENST00000505583 PCDHA1Q9Y5I3 950 aa6.8□□□□□ -1.32
GYPB-205ENST00000505583 NCOR1O75376 2440 aa6.8□□□□□ -1.32
GYPB-205ENST00000505583 BRWD1Q9NSI6 2320 aa6.79□□□□□ -1.32
GYPB-205ENST00000505583 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.79□□□□□ -1.32
GYPB-205ENST00000505583 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.79□□□□□ -1.32
GYPB-205ENST00000505583 FAM86C2PA6NEL3 165 aa6.79□□□□□ -1.32
GYPB-205ENST00000505583 RSPH10B2B2RC85 870 aa6.79□□□□□ -1.32
GYPB-205ENST00000505583 TREHO43280 583 aa6.79□□□□□ -1.32
GYPB-205ENST00000505583 LGALS2P05162 132 aa6.79□□□□□ -1.32
GYPB-205ENST00000505583 CYP21A2P08686 494 aa6.79□□□□□ -1.32
GYPB-205ENST00000505583 CTSHP09668 335 aa6.79□□□□□ -1.32
GYPB-205ENST00000505583 RSPH10BP0C881 870 aa6.79□□□□□ -1.32
GYPB-205ENST00000505583 SMIM10L2AP0DMW4 78 aa6.79□□□□□ -1.32
GYPB-205ENST00000505583 SMIM10L2BP0DMW5 78 aa6.79□□□□□ -1.32
GYPB-205ENST00000505583 PLA2G5P39877 138 aa6.79□□□□□ -1.32
GYPB-205ENST00000505583 HTRA4P83105 476 aaPredicted RBP6.79□□□□□ -1.32
GYPB-205ENST00000505583 TROAPQ12815 778 aa6.79□□□□□ -1.32
GYPB-205ENST00000505583 IKBKEQ14164 716 aa6.79□□□□□ -1.32
GYPB-205ENST00000505583 GRM4Q14833 912 aa6.79□□□□□ -1.32
GYPB-205ENST00000505583 PLEKHG4Q58EX7 1191 aa6.79□□□□□ -1.32
GYPB-205ENST00000505583 MYOCDQ8IZQ8 938 aa6.79□□□□□ -1.32
GYPB-205ENST00000505583 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.79□□□□□ -1.32
GYPB-205ENST00000505583 PIBF1Q8WXW3 757 aa6.79□□□□□ -1.32
GYPB-205ENST00000505583 TGS1Q96RS0 853 aaKnown RBP6.79□□□□□ -1.32
GYPB-205ENST00000505583 KATNAL1Q9BW62 490 aa6.79□□□□□ -1.32
GYPB-205ENST00000505583 C1QTNF1Q9BXJ1 281 aa6.79□□□□□ -1.32
GYPB-205ENST00000505583 RNPEPQ9H4A4 650 aa6.79□□□□□ -1.32
GYPB-205ENST00000505583 RIOX1Q9H6W3 641 aa6.79□□□□□ -1.32
GYPB-205ENST00000505583 CNNM2Q9H8M5 875 aa6.79□□□□□ -1.32
GYPB-205ENST00000505583 RTEL1Q9NZ71 1219 aa6.79□□□□□ -1.32
GYPB-205ENST00000505583 CTNNA3Q9UI47 895 aa6.79□□□□□ -1.32
GYPB-205ENST00000505583 COL4A6Q14031 1691 aa6.79□□□□□ -1.32
GYPB-205ENST00000505583 RALGAPA2Q2PPJ7 1873 aa6.79□□□□□ -1.32
GYPB-205ENST00000505583 FRMPD4Q14CM0 1322 aa6.78□□□□□ -1.32
GYPB-205ENST00000505583 KIAA1671Q9BY89 1806 aa6.78□□□□□ -1.32
GYPB-205ENST00000505583 LOXHD1Q8IVV2 1947 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms