RNA–Protein interactions for RNA: ENST00000504849.5

RFC1-208, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-208ENST00000504849 GRIN2BQ13224 1484 aa5.23□□□□□ -1.57
RFC1-208ENST00000504849 SAMD9Q5K651 1589 aa5.23□□□□□ -1.57
RFC1-208ENST00000504849 ABCA5Q8WWZ7 1642 aa5.23□□□□□ -1.57
RFC1-208ENST00000504849 PTPRKQ15262 1439 aa5.23□□□□□ -1.57
RFC1-208ENST00000504849 IFT140Q96RY7 1462 aa5.22□□□□□ -1.57
RFC1-208ENST00000504849 FANCD2Q9BXW9 1451 aa5.22□□□□□ -1.57
RFC1-208ENST00000504849 ROCK1Q13464 1354 aa5.22□□□□□ -1.57
RFC1-208ENST00000504849 FAM221AA4D161 298 aa5.22□□□□□ -1.57
RFC1-208ENST00000504849 GJB6O95452 261 aa5.22□□□□□ -1.57
RFC1-208ENST00000504849 F13A1P00488 732 aa5.22□□□□□ -1.57
RFC1-208ENST00000504849 SOX5P35711 763 aa5.22□□□□□ -1.57
RFC1-208ENST00000504849 EPHB1P54762 984 aa5.22□□□□□ -1.57
RFC1-208ENST00000504849 SSRP1Q08945 709 aaKnown RBP5.22□□□□□ -1.57
RFC1-208ENST00000504849 HLTFQ14527 1009 aaKnown RBP eCLIP5.22□□□□□ -1.575e-7■□□□□ 9.4
RFC1-208ENST00000504849 BRDTQ58F21 947 aaPredicted RBP5.22□□□□□ -1.57
RFC1-208ENST00000504849 FBXW10Q5XX13 1052 aa5.22□□□□□ -1.57
RFC1-208ENST00000504849 REC114Q7Z4M0 266 aa5.22□□□□□ -1.57
RFC1-208ENST00000504849 TMC3Q7Z5M5 1100 aa5.22□□□□□ -1.57
RFC1-208ENST00000504849 TICAM2Q86XR7 235 aa5.22□□□□□ -1.57
RFC1-208ENST00000504849 ADAMTS17Q8TE56 1095 aa5.22□□□□□ -1.57
RFC1-208ENST00000504849 NINJ1Q92982 152 aa5.22□□□□□ -1.57
RFC1-208ENST00000504849 NOX5Q96PH1 765 aa5.22□□□□□ -1.57
RFC1-208ENST00000504849 MIR1-1HGQ9H1L0 117 aa5.22□□□□□ -1.57
RFC1-208ENST00000504849 CAAP1Q9H8G2 361 aa5.22□□□□□ -1.57
RFC1-208ENST00000504849 DLL4Q9NR61 685 aa5.22□□□□□ -1.57
RFC1-208ENST00000504849 CLASP1Q7Z460 1538 aa5.22□□□□□ -1.57
RFC1-208ENST00000504849 RNF123Q5XPI4 1314 aa5.22□□□□□ -1.57
RFC1-208ENST00000504849 RPRD2Q5VT52 1461 aaKnown RBP5.21□□□□□ -1.58
RFC1-208ENST00000504849 A0A1W2PQ45 241 aaPredicted RBP5.21□□□□□ -1.58
RFC1-208ENST00000504849 A0A1W2PQY0 241 aa5.21□□□□□ -1.58
RFC1-208ENST00000504849 HMGB1P1B2RPK0 211 aaPredicted RBP5.21□□□□□ -1.58
RFC1-208ENST00000504849 TLR3O15455 904 aaKnown RBP5.21□□□□□ -1.58
RFC1-208ENST00000504849 RFPL3O75679 317 aa5.21□□□□□ -1.58
RFC1-208ENST00000504849 DBHP09172 617 aa5.21□□□□□ -1.58
RFC1-208ENST00000504849 CDKN1CP49918 316 aaPredicted RBP5.21□□□□□ -1.58
RFC1-208ENST00000504849 PURAQ00577 322 aaKnown RBP5.21□□□□□ -1.58
RFC1-208ENST00000504849 MVKQ03426 396 aa5.21□□□□□ -1.58
RFC1-208ENST00000504849 LRCH2Q5VUJ6 765 aa5.21□□□□□ -1.58
RFC1-208ENST00000504849 TMED8Q6PL24 325 aaPredicted RBP5.21□□□□□ -1.58
RFC1-208ENST00000504849 BNC2Q6ZN30 1099 aaPredicted RBP5.21□□□□□ -1.58
RFC1-208ENST00000504849 B3GNT8Q7Z7M8 397 aa5.21□□□□□ -1.58
RFC1-208ENST00000504849 THNSL2Q86YJ6 484 aa5.21□□□□□ -1.58
RFC1-208ENST00000504849 NIM1KQ8IY84 436 aa5.21□□□□□ -1.58
RFC1-208ENST00000504849 CHFRQ96EP1 664 aa5.21□□□□□ -1.58
RFC1-208ENST00000504849 JMJD8Q96S16 334 aa5.21□□□□□ -1.58
RFC1-208ENST00000504849 RPS6KC1Q96S38 1066 aa5.21□□□□□ -1.58
RFC1-208ENST00000504849 MPHOSPH9Q99550 1183 aa5.21□□□□□ -1.58
RFC1-208ENST00000504849 UBA5Q9GZZ9 404 aa5.21□□□□□ -1.58
RFC1-208ENST00000504849 CD2APQ9Y5K6 639 aa5.21□□□□□ -1.58
RFC1-208ENST00000504849 URB2Q14146 1524 aaKnown RBP5.2□□□□□ -1.58
RFC1-208ENST00000504849 SRGAP3O43295 1099 aa5.2□□□□□ -1.58
RFC1-208ENST00000504849 CREB3O43889 395 aa5.2□□□□□ -1.58
RFC1-208ENST00000504849 PLIN1O60240 522 aa5.2□□□□□ -1.58
RFC1-208ENST00000504849 DIAPH1O60610 1272 aaKnown RBP5.2□□□□□ -1.58
RFC1-208ENST00000504849 CAND2O75155 1236 aa5.2□□□□□ -1.58
RFC1-208ENST00000504849 DDAH1O94760 285 aa5.2□□□□□ -1.58
RFC1-208ENST00000504849 BPNT1O95861 308 aa5.2□□□□□ -1.58
RFC1-208ENST00000504849 ASGR2P07307 311 aa5.2□□□□□ -1.58
RFC1-208ENST00000504849 YARSP54577 528 aaKnown RBP5.2□□□□□ -1.58
RFC1-208ENST00000504849 NANOS3P60323 173 aaKnown RBP5.2□□□□□ -1.58
RFC1-208ENST00000504849 UBE4AQ14139 1066 aa5.2□□□□□ -1.58
RFC1-208ENST00000504849 NFE2Q16621 373 aaPredicted RBP5.2□□□□□ -1.58
RFC1-208ENST00000504849 TMEM201Q5SNT2 666 aa5.2□□□□□ -1.58
RFC1-208ENST00000504849 SPATC1Q76KD6 591 aa5.2□□□□□ -1.58
RFC1-208ENST00000504849 JAMLQ86YT9 394 aa5.2□□□□□ -1.58
RFC1-208ENST00000504849 TMEM52Q8NDY8 209 aa5.2□□□□□ -1.58
RFC1-208ENST00000504849 FBXO27Q8NI29 283 aa5.2□□□□□ -1.58
RFC1-208ENST00000504849 CDK5RAP1Q96SZ6 601 aaKnown RBP5.2□□□□□ -1.58
RFC1-208ENST00000504849 EPN3Q9H201 632 aa5.2□□□□□ -1.58
RFC1-208ENST00000504849 EHMT1Q9H9B1 1298 aa5.2□□□□□ -1.58
RFC1-208ENST00000504849 NTMQ9P121 344 aa5.2□□□□□ -1.58
RFC1-208ENST00000504849 PFDN2Q9UHV9 154 aa5.2□□□□□ -1.58
RFC1-208ENST00000504849 SLC12A7Q9Y666 1083 aa5.2□□□□□ -1.58
RFC1-208ENST00000504849 KIF7Q2M1P5 1343 aa5.2□□□□□ -1.58
RFC1-208ENST00000504849 POLA1P09884 1462 aaPredicted RBP5.2□□□□□ -1.58
RFC1-208ENST00000504849 ABCC10Q5T3U5 1492 aa5.2□□□□□ -1.58
RFC1-208ENST00000504849 TEX14Q8IWB6 1497 aa5.2□□□□□ -1.58
RFC1-208ENST00000504849 TOPBP1Q92547 1522 aa5.19□□□□□ -1.58
RFC1-208ENST00000504849 TSPAN6O43657 245 aa5.19□□□□□ -1.58
RFC1-208ENST00000504849 ALDH1L1O75891 902 aa5.19□□□□□ -1.58
RFC1-208ENST00000504849 ATE1O95260 518 aa5.19□□□□□ -1.58
RFC1-208ENST00000504849 POU3F3P20264 500 aaPredicted RBP5.19□□□□□ -1.58
RFC1-208ENST00000504849 HDAC1Q13547 482 aaPredicted RBP5.19□□□□□ -1.58
RFC1-208ENST00000504849 SNW1Q13573 536 aaKnown RBP5.19□□□□□ -1.58
RFC1-208ENST00000504849 PPP2R5EQ16537 467 aa5.19□□□□□ -1.58
RFC1-208ENST00000504849 LRRFIP1Q32MZ4 808 aaKnown RBP5.19□□□□□ -1.58
RFC1-208ENST00000504849 CT47A1Q5JQC4 288 aaPredicted RBP5.19□□□□□ -1.58
RFC1-208ENST00000504849 GLB1LQ6UWU2 654 aa5.19□□□□□ -1.58
RFC1-208ENST00000504849 GK5Q6ZS86 529 aa5.19□□□□□ -1.58
RFC1-208ENST00000504849 TSHZ1Q6ZSZ6 1077 aa5.19□□□□□ -1.58
RFC1-208ENST00000504849 EEPD1Q7L9B9 569 aa5.19□□□□□ -1.58
RFC1-208ENST00000504849 DDX42Q86XP3 938 aaKnown RBP eCLIP5.19□□□□□ -1.58
RFC1-208ENST00000504849 FAM178BQ8IXR5 827 aa5.19□□□□□ -1.58
RFC1-208ENST00000504849 DNERQ8NFT8 737 aa5.19□□□□□ -1.58
RFC1-208ENST00000504849 APBA2Q99767 749 aa5.19□□□□□ -1.58
RFC1-208ENST00000504849 TM9SF2Q99805 663 aa5.19□□□□□ -1.58
RFC1-208ENST00000504849 ASCC2Q9H1I8 757 aaPredicted RBP5.19□□□□□ -1.58
RFC1-208ENST00000504849 BRMS1Q9HCU9 246 aa5.19□□□□□ -1.58
RFC1-208ENST00000504849 RRP7BPQ9NSQ0 103 aa5.19□□□□□ -1.58
RFC1-208ENST00000504849 MAPRE3Q9UPY8 281 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms