RNA–Protein interactions for RNA: ENST00000504526.1

TRAPPC11-203, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-203ENST00000504526 SOX1O00570 391 aaPredicted RBP24.18■■□□□ 1.46
TRAPPC11-203ENST00000504526 SEC24BO95487 1268 aa24.18■■□□□ 1.46
TRAPPC11-203ENST00000504526 CYP2C9P11712 490 aa24.18■■□□□ 1.46
TRAPPC11-203ENST00000504526 CSF2RAP15509 400 aa24.18■■□□□ 1.46
TRAPPC11-203ENST00000504526 KCNA2P16389 499 aa24.18■■□□□ 1.46
TRAPPC11-203ENST00000504526 EPHB4P54760 987 aa24.18■■□□□ 1.46
TRAPPC11-203ENST00000504526 JAKMIP3Q5VZ66 844 aa24.18■■□□□ 1.46
TRAPPC11-203ENST00000504526 PGBD1Q96JS3 809 aa24.18■■□□□ 1.46
TRAPPC11-203ENST00000504526 C16orf70Q9BSU1 422 aa24.18■■□□□ 1.46
TRAPPC11-203ENST00000504526 ALG1Q9BT22 464 aa24.18■■□□□ 1.46
TRAPPC11-203ENST00000504526 GTF2IRD1Q9UHL9 959 aa24.18■■□□□ 1.46
TRAPPC11-203ENST00000504526 PPFIA3O75145 1194 aa24.17■■□□□ 1.46
TRAPPC11-203ENST00000504526 LGALS2P05162 132 aa24.17■■□□□ 1.46
TRAPPC11-203ENST00000504526 ARHGAP4P98171 946 aa24.17■■□□□ 1.46
TRAPPC11-203ENST00000504526 BFSP2Q13515 415 aa24.17■■□□□ 1.46
TRAPPC11-203ENST00000504526 PTGISQ16647 500 aa24.17■■□□□ 1.46
TRAPPC11-203ENST00000504526 CEP55Q53EZ4 464 aa24.17■■□□□ 1.46
TRAPPC11-203ENST00000504526 PSRC1Q6PGN9 363 aaPredicted RBP24.17■■□□□ 1.46
TRAPPC11-203ENST00000504526 NIPA1Q7RTP0 329 aa24.17■■□□□ 1.46
TRAPPC11-203ENST00000504526 CCDC155Q8N6L0 562 aa24.17■■□□□ 1.46
TRAPPC11-203ENST00000504526 RNPC3Q96LT9 517 aaKnown RBP24.17■■□□□ 1.46
TRAPPC11-203ENST00000504526 BCAS3Q9H6U6 928 aa24.17■■□□□ 1.46
TRAPPC11-203ENST00000504526 UMODL1Q5DID0 1318 aa24.16■■□□□ 1.46
TRAPPC11-203ENST00000504526 H3BRB1 525 aa24.16■■□□□ 1.46
TRAPPC11-203ENST00000504526 PITPNM1O00562 1244 aa24.16■■□□□ 1.46
TRAPPC11-203ENST00000504526 PFKFB2O60825 505 aa24.16■■□□□ 1.46
TRAPPC11-203ENST00000504526 ATP9AO75110 1047 aa24.16■■□□□ 1.46
TRAPPC11-203ENST00000504526 ZNF76P36508 570 aa24.16■■□□□ 1.46
TRAPPC11-203ENST00000504526 AK2P54819 239 aa24.16■■□□□ 1.46
TRAPPC11-203ENST00000504526 GDF6Q6KF10 455 aaPredicted RBP24.16■■□□□ 1.46
TRAPPC11-203ENST00000504526 PPP1R13LQ8WUF5 828 aa24.16■■□□□ 1.46
TRAPPC11-203ENST00000504526 LRCH3Q96II8 777 aa24.16■■□□□ 1.46
TRAPPC11-203ENST00000504526 TUT1Q9H6E5 874 aaKnown RBP24.16■■□□□ 1.46
TRAPPC11-203ENST00000504526 IL23AQ9NPF7 189 aa24.16■■□□□ 1.46
TRAPPC11-203ENST00000504526 KCNH7Q9NS40 1196 aa24.16■■□□□ 1.46
TRAPPC11-203ENST00000504526 VPS54Q9P1Q0 977 aa24.16■■□□□ 1.46
TRAPPC11-203ENST00000504526 HDAC6Q9UBN7 1215 aa24.16■■□□□ 1.46
TRAPPC11-203ENST00000504526 TPCN1Q9ULQ1 816 aa24.16■■□□□ 1.46
TRAPPC11-203ENST00000504526 CYP3A4P08684 503 aa24.15■■□□□ 1.46
TRAPPC11-203ENST00000504526 CCL23P55773 120 aa24.15■■□□□ 1.46
TRAPPC11-203ENST00000504526 NLRP5P59047 1200 aa24.15■■□□□ 1.46
TRAPPC11-203ENST00000504526 SCRN1Q12765 414 aa24.15■■□□□ 1.46
TRAPPC11-203ENST00000504526 RPUSD2Q8IZ73 545 aaKnown RBP24.15■■□□□ 1.46
TRAPPC11-203ENST00000504526 RETREG2Q8NC44 543 aa24.15■■□□□ 1.46
TRAPPC11-203ENST00000504526 CAGE1Q8TC20 777 aa24.15■■□□□ 1.46
TRAPPC11-203ENST00000504526 SEPT1Q8WYJ6 367 aa24.15■■□□□ 1.46
TRAPPC11-203ENST00000504526 WNT8AQ9H1J5 351 aa24.15■■□□□ 1.46
TRAPPC11-203ENST00000504526 ZNF215Q9UL58 517 aaPredicted RBP24.15■■□□□ 1.46
TRAPPC11-203ENST00000504526 MEIS1O00470 390 aa24.14■■□□□ 1.45
TRAPPC11-203ENST00000504526 NEK4P51957 841 aa24.14■■□□□ 1.45
TRAPPC11-203ENST00000504526 C8orf34Q49A92 452 aa24.14■■□□□ 1.45
TRAPPC11-203ENST00000504526 CRYGNQ8WXF5 182 aa24.14■■□□□ 1.45
TRAPPC11-203ENST00000504526 BUD13Q9BRD0 619 aaKnown RBP eCLIP24.14■■□□□ 1.45
TRAPPC11-203ENST00000504526 NFASCO94856 1347 aa24.13■■□□□ 1.45
TRAPPC11-203ENST00000504526 PFKMP08237 780 aa24.13■■□□□ 1.45
TRAPPC11-203ENST00000504526 RFC2P35250 354 aa24.13■■□□□ 1.45
TRAPPC11-203ENST00000504526 SP4Q02446 784 aa24.13■■□□□ 1.45
TRAPPC11-203ENST00000504526 TMEM240Q5SV17 173 aa24.13■■□□□ 1.45
TRAPPC11-203ENST00000504526 GALNT17Q6IS24 598 aa24.13■■□□□ 1.45
TRAPPC11-203ENST00000504526 CYP2W1Q8TAV3 490 aa24.13■■□□□ 1.45
TRAPPC11-203ENST00000504526 SDF4Q9BRK5 362 aa24.13■■□□□ 1.45
TRAPPC11-203ENST00000504526 C22orf23Q9BZE7 217 aa24.13■■□□□ 1.45
TRAPPC11-203ENST00000504526 MTIF3Q9H2K0 278 aaKnown RBP24.13■■□□□ 1.45
TRAPPC11-203ENST00000504526 STK36Q9NRP7 1315 aa24.12■■□□□ 1.45
TRAPPC11-203ENST00000504526 TCF7P36402 384 aaPredicted RBP24.12■■□□□ 1.45
TRAPPC11-203ENST00000504526 PTK7Q13308 1070 aa24.12■■□□□ 1.45
TRAPPC11-203ENST00000504526 C16orf59Q7L2K0 433 aa24.12■■□□□ 1.45
TRAPPC11-203ENST00000504526 JPH1Q9HDC5 661 aaPredicted RBP24.12■■□□□ 1.45
TRAPPC11-203ENST00000504526 PKD2L1Q9P0L9 805 aa24.12■■□□□ 1.45
TRAPPC11-203ENST00000504526 SLC9A2Q9UBY0 812 aa24.12■■□□□ 1.45
TRAPPC11-203ENST00000504526 FGBP02675 491 aa24.11■■□□□ 1.45
TRAPPC11-203ENST00000504526 ARP10275 920 aa24.11■■□□□ 1.45
TRAPPC11-203ENST00000504526 XBP1P17861 261 aa24.11■■□□□ 1.45
TRAPPC11-203ENST00000504526 SMAD3P84022 425 aaKnown RBP24.11■■□□□ 1.45
TRAPPC11-203ENST00000504526 SETQ01105 290 aaPredicted RBP24.11■■□□□ 1.45
TRAPPC11-203ENST00000504526 RBL2Q08999 1139 aa24.11■■□□□ 1.45
TRAPPC11-203ENST00000504526 UTP14CQ5TAP6 766 aaKnown RBP24.11■■□□□ 1.45
TRAPPC11-203ENST00000504526 ZNF365Q70YC5 407 aa24.11■■□□□ 1.45
TRAPPC11-203ENST00000504526 AFAP1L1Q8TED9 768 aa24.11■■□□□ 1.45
TRAPPC11-203ENST00000504526 SCLYQ96I15 445 aa24.11■■□□□ 1.45
TRAPPC11-203ENST00000504526 CTAGE1Q96RT6 745 aa24.11■■□□□ 1.45
TRAPPC11-203ENST00000504526 AGO4Q9HCK5 861 aaKnown RBP24.11■■□□□ 1.45
TRAPPC11-203ENST00000504526 PCDHA4Q9UN74 947 aa24.11■■□□□ 1.45
TRAPPC11-203ENST00000504526 C17orf102A2RUQ5 167 aa24.1■■□□□ 1.45
TRAPPC11-203ENST00000504526 PARNO95453 639 aaKnown RBP24.1■■□□□ 1.45
TRAPPC11-203ENST00000504526 IQCF3P0C7M6 154 aa24.1■■□□□ 1.45
TRAPPC11-203ENST00000504526 ACRP10323 421 aa24.1■■□□□ 1.45
TRAPPC11-203ENST00000504526 GNAT1P11488 350 aa24.1■■□□□ 1.45
TRAPPC11-203ENST00000504526 PLA2G4DQ86XP0 818 aa24.1■■□□□ 1.45
TRAPPC11-203ENST00000504526 DAGLBQ8NCG7 672 aa24.1■■□□□ 1.45
TRAPPC11-203ENST00000504526 GSTTP1A0A1W2PQM5 241 aa24.09■■□□□ 1.45
TRAPPC11-203ENST00000504526 FAM86B1E9PN63 330 aa24.09■■□□□ 1.45
TRAPPC11-203ENST00000504526 ADAMTS3O15072 1205 aa24.09■■□□□ 1.45
TRAPPC11-203ENST00000504526 FAM86B2P0C5J1 330 aa24.09■■□□□ 1.45
TRAPPC11-203ENST00000504526 SMIM10L2AP0DMW4 78 aa24.09■■□□□ 1.45
TRAPPC11-203ENST00000504526 SMIM10L2BP0DMW5 78 aa24.09■■□□□ 1.45
TRAPPC11-203ENST00000504526 HOXC8P31273 242 aa24.09■■□□□ 1.45
TRAPPC11-203ENST00000504526 CIITAP33076 1130 aa24.09■■□□□ 1.45
TRAPPC11-203ENST00000504526 RASIP1Q5U651 963 aa24.09■■□□□ 1.45
TRAPPC11-203ENST00000504526 TRIM50Q86XT4 487 aa24.09■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms