RNA–Protein interactions for RNA: ENST00000504000.1

SNF8-203, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 1,899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-203ENST00000504000 VAT1LQ9HCJ6 419 aa16.5■□□□□ 0.23
SNF8-203ENST00000504000 PANK4Q9NVE7 773 aa16.5■□□□□ 0.23
SNF8-203ENST00000504000 PCDHA2Q9Y5H9 948 aa16.5■□□□□ 0.23
SNF8-203ENST00000504000 IGKV6D-41A0A0C4DH26 115 aa16.5■□□□□ 0.23
SNF8-203ENST00000504000 CDC37Q16543 378 aaPredicted RBP16.5■□□□□ 0.23
SNF8-203ENST00000504000 CCDC40Q4G0X9 1142 aa16.5■□□□□ 0.23
SNF8-203ENST00000504000 TTMPQ5BVD1 217 aa16.5■□□□□ 0.23
SNF8-203ENST00000504000 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.5■□□□□ 0.23
SNF8-203ENST00000504000 KCNK18Q7Z418 384 aa16.5■□□□□ 0.23
SNF8-203ENST00000504000 CCDC65Q8IXS2 484 aa16.5■□□□□ 0.23
SNF8-203ENST00000504000 BCAS4Q8TDM0 211 aa16.5■□□□□ 0.23
SNF8-203ENST00000504000 PAGR1Q9BTK6 254 aa16.5■□□□□ 0.23
SNF8-203ENST00000504000 TANGO6Q9C0B7 1094 aa16.5■□□□□ 0.23
SNF8-203ENST00000504000 GLT8D2Q9H1C3 349 aa16.5■□□□□ 0.23
SNF8-203ENST00000504000 SRP68Q9UHB9 627 aaKnown RBP16.5■□□□□ 0.23
SNF8-203ENST00000504000 TMEM59LQ9UK28 342 aa16.5■□□□□ 0.23
SNF8-203ENST00000504000 BZW2Q9Y6E2 419 aaKnown RBP16.5■□□□□ 0.23
SNF8-203ENST00000504000 MYO3BQ8WXR4 1341 aa16.5■□□□□ 0.23
SNF8-203ENST00000504000 NCK2O43639 380 aa16.49■□□□□ 0.23
SNF8-203ENST00000504000 PALMO75781 387 aa16.49■□□□□ 0.23
SNF8-203ENST00000504000 GLI1P08151 1106 aa16.49■□□□□ 0.23
SNF8-203ENST00000504000 MATR3P43243 847 aaKnown RBP eCLIP16.49■□□□□ 0.23
SNF8-203ENST00000504000 MRPL12P52815 198 aaKnown RBP16.49■□□□□ 0.23
SNF8-203ENST00000504000 GNGT1P63211 74 aa16.49■□□□□ 0.23
SNF8-203ENST00000504000 KDM7AQ6ZMT4 941 aa16.49■□□□□ 0.23
SNF8-203ENST00000504000 B4GALNT4Q76KP1 1039 aa16.49■□□□□ 0.23
SNF8-203ENST00000504000 TBC1D22AQ8WUA7 517 aa16.49■□□□□ 0.23
SNF8-203ENST00000504000 HAS1Q92839 578 aa16.49■□□□□ 0.23
SNF8-203ENST00000504000 ZIM3Q96PE6 472 aa16.49■□□□□ 0.23
SNF8-203ENST00000504000 UBA5Q9GZZ9 404 aa16.49■□□□□ 0.23
SNF8-203ENST00000504000 CD209Q9NNX6 404 aa16.49■□□□□ 0.23
SNF8-203ENST00000504000 DDX25Q9UHL0 483 aaKnown RBP16.49■□□□□ 0.23
SNF8-203ENST00000504000 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.49■□□□□ 0.23
SNF8-203ENST00000504000 PITPNM2Q9BZ72 1349 aa16.49■□□□□ 0.23
SNF8-203ENST00000504000 FRMD3A2A2Y4 597 aa16.48■□□□□ 0.23
SNF8-203ENST00000504000 BUB1O43683 1085 aa16.48■□□□□ 0.23
SNF8-203ENST00000504000 MYBP10242 640 aa16.48■□□□□ 0.23
SNF8-203ENST00000504000 TNNC1P63316 161 aa16.48■□□□□ 0.23
SNF8-203ENST00000504000 GABPAQ06546 454 aa16.48■□□□□ 0.23
SNF8-203ENST00000504000 IFI16Q16666 785 aaKnown RBP16.48■□□□□ 0.23
SNF8-203ENST00000504000 CFAP58Q5T655 872 aa16.48■□□□□ 0.23
SNF8-203ENST00000504000 PACS2Q86VP3 889 aa16.48■□□□□ 0.23
SNF8-203ENST00000504000 CUL5Q93034 780 aa16.48■□□□□ 0.23
SNF8-203ENST00000504000 ARL8AQ96BM9 186 aa16.48■□□□□ 0.23
SNF8-203ENST00000504000 KCTD10Q9H3F6 313 aa16.48■□□□□ 0.23
SNF8-203ENST00000504000 PLCB1Q9NQ66 1216 aa16.48■□□□□ 0.23
SNF8-203ENST00000504000 PCDHA12Q9UN75 941 aa16.48■□□□□ 0.23
SNF8-203ENST00000504000 HEXIM1O94992 359 aaKnown RBP16.48■□□□□ 0.23
SNF8-203ENST00000504000 ATP2B4P23634 1241 aa16.48■□□□□ 0.23
SNF8-203ENST00000504000 CCT5P48643 541 aa16.48■□□□□ 0.23
SNF8-203ENST00000504000 POLR2FP61218 127 aaKnown RBP16.48■□□□□ 0.23
SNF8-203ENST00000504000 LRRC41Q15345 812 aa16.48■□□□□ 0.23
SNF8-203ENST00000504000 ECM1Q16610 540 aa16.48■□□□□ 0.23
SNF8-203ENST00000504000 ANKRD13CQ8N6S4 541 aa16.48■□□□□ 0.23
SNF8-203ENST00000504000 COA7Q96BR5 231 aa16.48■□□□□ 0.23
SNF8-203ENST00000504000 LSM14BQ9BX40 385 aaKnown RBP16.48■□□□□ 0.23
SNF8-203ENST00000504000 NLRC4Q9NPP4 1024 aa16.48■□□□□ 0.23
SNF8-203ENST00000504000 RTCBQ9Y3I0 505 aaKnown RBP16.48■□□□□ 0.23
SNF8-203ENST00000504000 FAM169AQ9Y6X4 670 aa16.48■□□□□ 0.23
SNF8-203ENST00000504000 FOCADQ5VW36 1801 aa16.48■□□□□ 0.23
SNF8-203ENST00000504000 KLRC1P26715 233 aa16.47■□□□□ 0.23
SNF8-203ENST00000504000 CARSP49589 748 aaKnown RBP16.47■□□□□ 0.23
SNF8-203ENST00000504000 NAP1L1P55209 391 aaKnown RBP16.47■□□□□ 0.23
SNF8-203ENST00000504000 ZNF543Q08ER8 600 aa16.47■□□□□ 0.23
SNF8-203ENST00000504000 USP38Q8NB14 1042 aa16.47■□□□□ 0.23
SNF8-203ENST00000504000 GLIS3Q8NEA6 775 aa16.47■□□□□ 0.23
SNF8-203ENST00000504000 TBC1D5Q92609 795 aa16.47■□□□□ 0.23
SNF8-203ENST00000504000 MS4A14Q96JA4 679 aa16.47■□□□□ 0.23
SNF8-203ENST00000504000 PBKQ96KB5 322 aa16.47■□□□□ 0.23
SNF8-203ENST00000504000 CALR3Q96L12 384 aaKnown RBP16.47■□□□□ 0.23
SNF8-203ENST00000504000 PSMB7Q99436 277 aa16.47■□□□□ 0.23
SNF8-203ENST00000504000 GANQ9H2C0 597 aa16.47■□□□□ 0.23
SNF8-203ENST00000504000 JMJD4Q9H9V9 463 aa16.47■□□□□ 0.23
SNF8-203ENST00000504000 EPB41L5Q9HCM4 733 aa16.47■□□□□ 0.23
SNF8-203ENST00000504000 EHD2Q9NZN4 543 aa16.47■□□□□ 0.23
SNF8-203ENST00000504000 USP11P51784 963 aa16.46■□□□□ 0.23
SNF8-203ENST00000504000 NFIXQ14938 502 aa16.46■□□□□ 0.23
SNF8-203ENST00000504000 KIAA0753Q2KHM9 967 aa16.46■□□□□ 0.23
SNF8-203ENST00000504000 GPATCH4Q5T3I0 446 aaKnown RBP16.46■□□□□ 0.23
SNF8-203ENST00000504000 LRIG3Q6UXM1 1119 aa16.46■□□□□ 0.23
SNF8-203ENST00000504000 SUGP1Q8IWZ8 645 aaKnown RBP16.46■□□□□ 0.23
SNF8-203ENST00000504000 SMARCAL1Q9NZC9 954 aa16.46■□□□□ 0.23
SNF8-203ENST00000504000 GGA2Q9UJY4 613 aa16.46■□□□□ 0.23
SNF8-203ENST00000504000 FBXL5Q9UKA1 691 aa16.46■□□□□ 0.23
SNF8-203ENST00000504000 NFU1Q9UMS0 254 aa16.46■□□□□ 0.23
SNF8-203ENST00000504000 CYP3A7-CYP3A51PA0A087WV96 503 aa16.46■□□□□ 0.22
SNF8-203ENST00000504000 A0A087X0T9 212 aa16.46■□□□□ 0.22
SNF8-203ENST00000504000 ZNF233A6NK53 670 aa16.46■□□□□ 0.22
SNF8-203ENST00000504000 HMGB1P1B2RPK0 211 aaPredicted RBP16.46■□□□□ 0.22
SNF8-203ENST00000504000 BHMG1C9JSJ3 638 aaPredicted RBP16.46■□□□□ 0.22
SNF8-203ENST00000504000 FAM228BP0C875 321 aa16.46■□□□□ 0.22
SNF8-203ENST00000504000 CYP3A7P24462 503 aa16.46■□□□□ 0.22
SNF8-203ENST00000504000 HSPA9P38646 679 aaKnown RBP16.46■□□□□ 0.22
SNF8-203ENST00000504000 ATP2B2Q01814 1243 aa16.46■□□□□ 0.22
SNF8-203ENST00000504000 GUCY2DQ02846 1103 aa16.46■□□□□ 0.22
SNF8-203ENST00000504000 KLHL30Q0D2K2 578 aa16.46■□□□□ 0.22
SNF8-203ENST00000504000 CUL1Q13616 776 aa16.46■□□□□ 0.22
SNF8-203ENST00000504000 ASIC2Q16515 512 aa16.46■□□□□ 0.22
SNF8-203ENST00000504000 MOXD1Q6UVY6 613 aa16.46■□□□□ 0.22
SNF8-203ENST00000504000 FRMD5Q7Z6J6 570 aa16.46■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms