RNA–Protein interactions for RNA: ENST00000498539.1

LRCH4-210, Transcript of leucine rich repeats and calponin homology domain containing 4, humanhuman

TSL 3

Gene LRCH4, Length 819 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH4-210ENST00000498539 LGR5O75473 907 aa18.19■□□□□ 0.5
LRCH4-210ENST00000498539 CTSHP09668 335 aa18.19■□□□□ 0.5
LRCH4-210ENST00000498539 SMIM10L2AP0DMW4 78 aa18.19■□□□□ 0.5
LRCH4-210ENST00000498539 SMIM10L2BP0DMW5 78 aa18.19■□□□□ 0.5
LRCH4-210ENST00000498539 COL9A1P20849 921 aa18.19■□□□□ 0.5
LRCH4-210ENST00000498539 HOXC8P31273 242 aa18.19■□□□□ 0.5
LRCH4-210ENST00000498539 MKRN4PQ13434 485 aaPredicted RBP18.19■□□□□ 0.5
LRCH4-210ENST00000498539 CATIPQ7Z7H3 387 aa18.19■□□□□ 0.5
LRCH4-210ENST00000498539 DBF4BQ8NFT6 615 aa18.19■□□□□ 0.5
LRCH4-210ENST00000498539 IGDCC4Q8TDY8 1250 aa18.19■□□□□ 0.5
LRCH4-210ENST00000498539 RUFY2Q8WXA3 655 aa18.19■□□□□ 0.5
LRCH4-210ENST00000498539 LY9Q9HBG7 655 aa18.19■□□□□ 0.5
LRCH4-210ENST00000498539 RTEL1Q9NZ71 1219 aa18.19■□□□□ 0.5
LRCH4-210ENST00000498539 RBM8AQ9Y5S9 174 aaKnown RBP18.19■□□□□ 0.5
LRCH4-210ENST00000498539 ATG2AQ2TAZ0 1938 aa18.19■□□□□ 0.5
LRCH4-210ENST00000498539 C17orf102A2RUQ5 167 aa18.18■□□□□ 0.5
LRCH4-210ENST00000498539 H3BRB1 525 aa18.18■□□□□ 0.5
LRCH4-210ENST00000498539 TREHO43280 583 aa18.18■□□□□ 0.5
LRCH4-210ENST00000498539 PLEKHA8P1O95397 391 aa18.18■□□□□ 0.5
LRCH4-210ENST00000498539 PARNO95453 639 aaKnown RBP18.18■□□□□ 0.5
LRCH4-210ENST00000498539 SP4Q02446 784 aa18.18■□□□□ 0.5
LRCH4-210ENST00000498539 IKBKEQ14164 716 aa18.18■□□□□ 0.5
LRCH4-210ENST00000498539 USP17L6PQ6QN14 398 aa18.18■□□□□ 0.5
LRCH4-210ENST00000498539 CYFIP1Q7L576 1253 aa18.18■□□□□ 0.5
LRCH4-210ENST00000498539 ZNF654Q8IZM8 581 aa18.18■□□□□ 0.5
LRCH4-210ENST00000498539 SAMD3Q8N6K7 520 aa18.18■□□□□ 0.5
LRCH4-210ENST00000498539 ATP6V0A1Q93050 837 aa18.18■□□□□ 0.5
LRCH4-210ENST00000498539 INPP4AQ96PE3 977 aaPredicted RBP18.18■□□□□ 0.5
LRCH4-210ENST00000498539 RAD9AQ99638 391 aa18.18■□□□□ 0.5
LRCH4-210ENST00000498539 TUT1Q9H6E5 874 aaKnown RBP18.18■□□□□ 0.5
LRCH4-210ENST00000498539 RSPH10B2B2RC85 870 aa18.17■□□□□ 0.5
LRCH4-210ENST00000498539 RSPH10BP0C881 870 aa18.17■□□□□ 0.5
LRCH4-210ENST00000498539 TGFB3P10600 412 aa18.17■□□□□ 0.5
LRCH4-210ENST00000498539 RXRAP19793 462 aa18.17■□□□□ 0.5
LRCH4-210ENST00000498539 SART3Q15020 963 aaKnown RBP18.17■□□□□ 0.5
LRCH4-210ENST00000498539 RAB11FIP4Q86YS3 637 aa18.17■□□□□ 0.5
LRCH4-210ENST00000498539 MYOCDQ8IZQ8 938 aa18.17■□□□□ 0.5
LRCH4-210ENST00000498539 CMTR1Q8N1G2 835 aaKnown RBP18.17■□□□□ 0.5
LRCH4-210ENST00000498539 GPR20Q99678 358 aa18.17■□□□□ 0.5
LRCH4-210ENST00000498539 C17orf80Q9BSJ5 609 aa18.17■□□□□ 0.5
LRCH4-210ENST00000498539 SUGCTQ9HAC7 445 aa18.17■□□□□ 0.5
LRCH4-210ENST00000498539 SPATA31C2B4DYI2 1134 aa18.16■□□□□ 0.5
LRCH4-210ENST00000498539 NOP56O00567 594 aaKnown RBP18.16■□□□□ 0.5
LRCH4-210ENST00000498539 ICAM3P32942 547 aa18.16■□□□□ 0.5
LRCH4-210ENST00000498539 ERVK-21P61565 698 aa18.16■□□□□ 0.5
LRCH4-210ENST00000498539 AAK1Q2M2I8 961 aa18.16■□□□□ 0.5
LRCH4-210ENST00000498539 GNPTABQ3T906 1256 aa18.16■□□□□ 0.5
LRCH4-210ENST00000498539 METTL7BQ6UX53 244 aa18.16■□□□□ 0.5
LRCH4-210ENST00000498539 MAP4K1Q92918 833 aa18.16■□□□□ 0.5
LRCH4-210ENST00000498539 TGS1Q96RS0 853 aaKnown RBP18.16■□□□□ 0.5
LRCH4-210ENST00000498539 SPZ1Q9BXG8 430 aa18.16■□□□□ 0.5
LRCH4-210ENST00000498539 RNPEPQ9H4A4 650 aa18.16■□□□□ 0.5
LRCH4-210ENST00000498539 SETD4Q9NVD3 440 aa18.16■□□□□ 0.5
LRCH4-210ENST00000498539 hCG_1642624A0A1W2PR95 340 aa18.15■□□□□ 0.5
LRCH4-210ENST00000498539 FIBPO43427 364 aa18.15■□□□□ 0.5
LRCH4-210ENST00000498539 PRC1O43663 620 aa18.15■□□□□ 0.5
LRCH4-210ENST00000498539 TRAF1Q13077 416 aa18.15■□□□□ 0.5
LRCH4-210ENST00000498539 PLEKHG4Q58EX7 1191 aa18.15■□□□□ 0.5
LRCH4-210ENST00000498539 UTP14CQ5TAP6 766 aaKnown RBP18.15■□□□□ 0.5
LRCH4-210ENST00000498539 SMARCC2Q8TAQ2 1214 aa18.15■□□□□ 0.5
LRCH4-210ENST00000498539 HLA-CQ95604 372 aa18.15■□□□□ 0.5
LRCH4-210ENST00000498539 COG5Q9UP83 839 aa18.15■□□□□ 0.5
LRCH4-210ENST00000498539 EMSYQ7Z589 1322 aa18.15■□□□□ 0.5
LRCH4-210ENST00000498539 SH2B2O14492 632 aaPredicted RBP18.14■□□□□ 0.49
LRCH4-210ENST00000498539 MEIS2O14770 477 aa18.14■□□□□ 0.49
LRCH4-210ENST00000498539 EFCAB14O75071 495 aa18.14■□□□□ 0.49
LRCH4-210ENST00000498539 DDAH1O94760 285 aa18.14■□□□□ 0.49
LRCH4-210ENST00000498539 SRBD1Q8N5C6 995 aaKnown RBP18.14■□□□□ 0.49
LRCH4-210ENST00000498539 CTCFLQ8NI51 663 aaPredicted RBP18.14■□□□□ 0.49
LRCH4-210ENST00000498539 LMBR1Q8WVP7 490 aa18.14■□□□□ 0.49
LRCH4-210ENST00000498539 RRP36Q96EU6 259 aaKnown RBP18.14■□□□□ 0.49
LRCH4-210ENST00000498539 KAT6AQ92794 2004 aa18.14■□□□□ 0.49
LRCH4-210ENST00000498539 RALGAPA2Q2PPJ7 1873 aa18.14■□□□□ 0.49
LRCH4-210ENST00000498539 COL4A6Q14031 1691 aa18.13■□□□□ 0.49
LRCH4-210ENST00000498539 AMHP03971 560 aa18.13■□□□□ 0.49
LRCH4-210ENST00000498539 NEDD9Q14511 834 aa18.13■□□□□ 0.49
LRCH4-210ENST00000498539 UBE2SQ16763 222 aa18.13■□□□□ 0.49
LRCH4-210ENST00000498539 PCNX4Q63HM2 1172 aa18.13■□□□□ 0.49
LRCH4-210ENST00000498539 LRRC2Q9BYS8 371 aa18.13■□□□□ 0.49
LRCH4-210ENST00000498539 LSG1Q9H089 658 aaKnown RBP18.13■□□□□ 0.49
LRCH4-210ENST00000498539 PKD2L1Q9P0L9 805 aa18.13■□□□□ 0.49
LRCH4-210ENST00000498539 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.12■□□□□ 0.49
LRCH4-210ENST00000498539 STAM2O75886 525 aa18.12■□□□□ 0.49
LRCH4-210ENST00000498539 HTRA4P83105 476 aaPredicted RBP18.12■□□□□ 0.49
LRCH4-210ENST00000498539 ARHGAP4P98171 946 aa18.12■□□□□ 0.49
LRCH4-210ENST00000498539 CASC1Q6TDU7 716 aa18.12■□□□□ 0.49
LRCH4-210ENST00000498539 RUFY4Q6ZNE9 571 aa18.12■□□□□ 0.49
LRCH4-210ENST00000498539 FBXO22Q8NEZ5 403 aa18.12■□□□□ 0.49
LRCH4-210ENST00000498539 SP7Q8TDD2 431 aaPredicted RBP18.12■□□□□ 0.49
LRCH4-210ENST00000498539 SEPT8Q92599 483 aa18.12■□□□□ 0.49
LRCH4-210ENST00000498539 KHSRPQ92945 711 aaKnown RBP eCLIP18.12■□□□□ 0.49
LRCH4-210ENST00000498539 CUL5Q93034 780 aa18.12■□□□□ 0.49
LRCH4-210ENST00000498539 SEC63Q9UGP8 760 aaKnown RBP18.12■□□□□ 0.49
LRCH4-210ENST00000498539 PIK3CDO00329 1044 aa18.11■□□□□ 0.49
LRCH4-210ENST00000498539 ATP9AO75110 1047 aa18.11■□□□□ 0.49
LRCH4-210ENST00000498539 UPP2O95045 317 aa18.11■□□□□ 0.49
LRCH4-210ENST00000498539 KCNA2P16389 499 aa18.11■□□□□ 0.49
LRCH4-210ENST00000498539 KIF5BP33176 963 aa18.11■□□□□ 0.49
LRCH4-210ENST00000498539 ADAM17P78536 824 aa18.11■□□□□ 0.49
LRCH4-210ENST00000498539 NFXL1Q6ZNB6 911 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms