RNA–Protein interactions for RNA: ENST00000497658.5

PHC3-217, Transcript of polyhomeotic homolog 3, humanhuman

TSL 1 (best) BASIC

Gene PHC3, Length 2,087 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-217ENST00000497658 ZKSCAN4Q969J2 545 aaPredicted RBP6.26□□□□□ -1.41
PHC3-217ENST00000497658 ZNF622Q969S3 477 aaKnown RBP eCLIP6.26□□□□□ -1.419e-8■■□□□ 12.4
PHC3-217ENST00000497658 CNOT6LQ96LI5 555 aaKnown RBP6.26□□□□□ -1.41
PHC3-217ENST00000497658 RNPC3Q96LT9 517 aaKnown RBP6.26□□□□□ -1.41
PHC3-217ENST00000497658 PCMTD1Q96MG8 357 aaPredicted RBP6.26□□□□□ -1.41
PHC3-217ENST00000497658 SUFUQ9UMX1 484 aa6.26□□□□□ -1.41
PHC3-217ENST00000497658 TFR2Q9UP52 801 aa6.26□□□□□ -1.41
PHC3-217ENST00000497658 ALS2Q96Q42 1657 aa6.25□□□□□ -1.41
PHC3-217ENST00000497658 COL18A1P39060 1754 aa6.25□□□□□ -1.41
PHC3-217ENST00000497658 SPATA31A3Q5VYP0 1347 aa6.25□□□□□ -1.41
PHC3-217ENST00000497658 RBAK-RBAKDNI3L0D1 243 aa6.25□□□□□ -1.41
PHC3-217ENST00000497658 PRKAB2O43741 272 aa6.25□□□□□ -1.41
PHC3-217ENST00000497658 COBLO75128 1261 aa6.25□□□□□ -1.41
PHC3-217ENST00000497658 ERCC3P19447 782 aa6.25□□□□□ -1.41
PHC3-217ENST00000497658 KIF5BP33176 963 aa6.25□□□□□ -1.41
PHC3-217ENST00000497658 HSPA9P38646 679 aaKnown RBP6.25□□□□□ -1.41
PHC3-217ENST00000497658 MAGEA1P43355 309 aa6.25□□□□□ -1.41
PHC3-217ENST00000497658 WNT7BP56706 349 aa6.25□□□□□ -1.41
PHC3-217ENST00000497658 SLC7A5Q01650 507 aa6.25□□□□□ -1.41
PHC3-217ENST00000497658 CUL1Q13616 776 aa6.25□□□□□ -1.41
PHC3-217ENST00000497658 EZH2Q15910 746 aaKnown RBP6.25□□□□□ -1.41
PHC3-217ENST00000497658 CDC37Q16543 378 aaPredicted RBP6.25□□□□□ -1.41
PHC3-217ENST00000497658 CEP85LQ5SZL2 805 aa6.25□□□□□ -1.41
PHC3-217ENST00000497658 CNNM4Q6P4Q7 775 aa6.25□□□□□ -1.41
PHC3-217ENST00000497658 NLRP10Q86W26 655 aa6.25□□□□□ -1.41
PHC3-217ENST00000497658 C2CD5Q86YS7 1000 aa6.25□□□□□ -1.41
PHC3-217ENST00000497658 RASSF8Q8NHQ8 419 aa6.25□□□□□ -1.41
PHC3-217ENST00000497658 ZCRB1Q8TBF4 217 aaKnown RBP6.25□□□□□ -1.41
PHC3-217ENST00000497658 SYN2Q92777 582 aaPredicted RBP6.25□□□□□ -1.41
PHC3-217ENST00000497658 LRRC45Q96CN5 670 aa6.25□□□□□ -1.41
PHC3-217ENST00000497658 CCDC43Q96MW1 224 aaKnown RBP6.25□□□□□ -1.41
PHC3-217ENST00000497658 DUSP9Q99956 384 aaKnown RBP6.25□□□□□ -1.41
PHC3-217ENST00000497658 BRIP1Q9BX63 1249 aa6.25□□□□□ -1.41
PHC3-217ENST00000497658 TLR10Q9BXR5 811 aa6.25□□□□□ -1.41
PHC3-217ENST00000497658 VEZTQ9HBM0 779 aa6.25□□□□□ -1.41
PHC3-217ENST00000497658 ARHGAP20Q9P2F6 1191 aa6.25□□□□□ -1.41
PHC3-217ENST00000497658 PAPPAQ13219 1627 aa6.25□□□□□ -1.41
PHC3-217ENST00000497658 BCORQ6W2J9 1755 aa6.25□□□□□ -1.41
PHC3-217ENST00000497658 ARAP2Q8WZ64 1704 aa6.24□□□□□ -1.41
PHC3-217ENST00000497658 CNTNAP5Q8WYK1 1306 aa6.24□□□□□ -1.41
PHC3-217ENST00000497658 MYH13Q9UKX3 1938 aa6.24□□□□□ -1.41
PHC3-217ENST00000497658 GMNCA6NCL1 334 aa6.24□□□□□ -1.41
PHC3-217ENST00000497658 GCOM1H8Y6P7 765 aaPredicted RBP6.24□□□□□ -1.41
PHC3-217ENST00000497658 IRS4O14654 1257 aaPredicted RBP6.24□□□□□ -1.41
PHC3-217ENST00000497658 PRDM1O75626 825 aa6.24□□□□□ -1.41
PHC3-217ENST00000497658 HEXIM1O94992 359 aaKnown RBP6.24□□□□□ -1.41
PHC3-217ENST00000497658 MOCS3O95396 460 aa6.24□□□□□ -1.41
PHC3-217ENST00000497658 PLEKHA8P1O95397 391 aa6.24□□□□□ -1.41
PHC3-217ENST00000497658 STARD3NLO95772 234 aa6.24□□□□□ -1.41
PHC3-217ENST00000497658 GLI1P08151 1106 aa6.24□□□□□ -1.41
PHC3-217ENST00000497658 MYZAPP0CAP1 466 aa6.24□□□□□ -1.41
PHC3-217ENST00000497658 EZRP15311 586 aaKnown RBP6.24□□□□□ -1.41
PHC3-217ENST00000497658 ELF1P32519 619 aa6.24□□□□□ -1.41
PHC3-217ENST00000497658 MATR3P43243 847 aaKnown RBP eCLIP6.24□□□□□ -1.41
PHC3-217ENST00000497658 ATP1A2P50993 1020 aa6.24□□□□□ -1.41
PHC3-217ENST00000497658 TNNC1P63316 161 aa6.24□□□□□ -1.41
PHC3-217ENST00000497658 GUCY1A3Q02108 690 aa6.24□□□□□ -1.41
PHC3-217ENST00000497658 HIC1Q14526 733 aa6.24□□□□□ -1.41
PHC3-217ENST00000497658 SNCBQ16143 134 aa6.24□□□□□ -1.41
PHC3-217ENST00000497658 VWA3BQ502W6 1294 aa6.24□□□□□ -1.41
PHC3-217ENST00000497658 RNF187Q5TA31 235 aaPredicted RBP6.24□□□□□ -1.41
PHC3-217ENST00000497658 KCTD16Q68DU8 428 aa6.24□□□□□ -1.41
PHC3-217ENST00000497658 TTC19Q6DKK2 380 aaPredicted RBP6.24□□□□□ -1.41
PHC3-217ENST00000497658 NFRKBQ6P4R8 1299 aa6.24□□□□□ -1.41
PHC3-217ENST00000497658 BLIDQ8IZY5 108 aa6.24□□□□□ -1.41
PHC3-217ENST00000497658 SGSM3Q96HU1 749 aa6.24□□□□□ -1.41
PHC3-217ENST00000497658 CCDC85AQ96PX6 553 aaPredicted RBP6.24□□□□□ -1.41
PHC3-217ENST00000497658 C7orf25Q9BPX7 421 aa6.24□□□□□ -1.41
PHC3-217ENST00000497658 NDST4Q9H3R1 872 aa6.24□□□□□ -1.41
PHC3-217ENST00000497658 EPB41L5Q9HCM4 733 aa6.24□□□□□ -1.41
PHC3-217ENST00000497658 PLCB1Q9NQ66 1216 aa6.24□□□□□ -1.41
PHC3-217ENST00000497658 RBM12Q9NTZ6 932 aaKnown RBP6.24□□□□□ -1.41
PHC3-217ENST00000497658 TCP11L1Q9NUJ3 509 aa6.24□□□□□ -1.41
PHC3-217ENST00000497658 LRP2BPQ9P2M1 347 aa6.24□□□□□ -1.41
PHC3-217ENST00000497658 SWAP70Q9UH65 585 aa6.24□□□□□ -1.41
PHC3-217ENST00000497658 MCM8Q9UJA3 840 aa6.24□□□□□ -1.41
PHC3-217ENST00000497658 NFU1Q9UMS0 254 aa6.24□□□□□ -1.41
PHC3-217ENST00000497658 PCDHA4Q9UN74 947 aa6.24□□□□□ -1.41
PHC3-217ENST00000497658 SIK3Q9Y2K2 1263 aa6.24□□□□□ -1.41
PHC3-217ENST00000497658 KIF13AQ9H1H9 1805 aa6.24□□□□□ -1.41
PHC3-217ENST00000497658 E7EVH7 732 aa6.24□□□□□ -1.41
PHC3-217ENST00000497658 TRAPPC3O43617 180 aa6.24□□□□□ -1.41
PHC3-217ENST00000497658 PAEPP09466 180 aa6.24□□□□□ -1.41
PHC3-217ENST00000497658 EIF4A3P38919 411 aaKnown RBP6.24□□□□□ -1.41
PHC3-217ENST00000497658 CARSP49589 748 aaKnown RBP6.24□□□□□ -1.41
PHC3-217ENST00000497658 LRRC63Q05C16 580 aa6.24□□□□□ -1.41
PHC3-217ENST00000497658 PDE4DQ08499 809 aa6.24□□□□□ -1.41
PHC3-217ENST00000497658 IFT88Q13099 833 aa6.24□□□□□ -1.41
PHC3-217ENST00000497658 MTMR3Q13615 1198 aa6.24□□□□□ -1.41
PHC3-217ENST00000497658 CRYMQ14894 314 aa6.24□□□□□ -1.41
PHC3-217ENST00000497658 MAN2A1Q16706 1144 aa6.24□□□□□ -1.41
PHC3-217ENST00000497658 ASTE1Q2TB18 679 aaPredicted RBP6.24□□□□□ -1.41
PHC3-217ENST00000497658 GRIPAP1Q4V328 841 aa6.24□□□□□ -1.41
PHC3-217ENST00000497658 LACTB2Q53H82 288 aaPredicted RBP6.24□□□□□ -1.41
PHC3-217ENST00000497658 KLHDC7AQ5VTJ3 777 aa6.24□□□□□ -1.41
PHC3-217ENST00000497658 ANKRD40Q6AI12 368 aa6.24□□□□□ -1.41
PHC3-217ENST00000497658 CENPPQ6IPU0 288 aa6.24□□□□□ -1.41
PHC3-217ENST00000497658 KRT26Q7Z3Y9 468 aa6.24□□□□□ -1.41
PHC3-217ENST00000497658 PARP9Q8IXQ6 854 aa6.24□□□□□ -1.41
PHC3-217ENST00000497658 PIK3R5Q8WYR1 880 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms