RNA–Protein interactions for RNA: ENST00000497544.2

CTSD-206, Transcript of cathepsin D, humanhuman

TSL 2

Gene CTSD, Length 783 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-206ENST00000497544 TDP2O95551 362 aa22.71■■□□□ 1.23
CTSD-206ENST00000497544 CYP3A7P24462 503 aa22.71■■□□□ 1.23
CTSD-206ENST00000497544 SETQ01105 290 aaPredicted RBP22.71■■□□□ 1.23
CTSD-206ENST00000497544 RESTQ13127 1097 aa22.71■■□□□ 1.23
CTSD-206ENST00000497544 RILPL1Q5EBL4 403 aa22.71■■□□□ 1.23
CTSD-206ENST00000497544 PPP4R3AQ6IN85 833 aa22.71■■□□□ 1.23
CTSD-206ENST00000497544 LRRC37A2A6NM11 1700 aa22.71■■□□□ 1.23
CTSD-206ENST00000497544 IGLV3-22A0A075B6J6 115 aa22.7■■□□□ 1.22
CTSD-206ENST00000497544 C11orf97A0A1B0GVM6 126 aaPredicted RBP22.7■■□□□ 1.22
CTSD-206ENST00000497544 ARP10275 920 aa22.7■■□□□ 1.22
CTSD-206ENST00000497544 NUCB2P80303 420 aa22.7■■□□□ 1.22
CTSD-206ENST00000497544 MDM2Q00987 491 aaPredicted RBP22.7■■□□□ 1.22
CTSD-206ENST00000497544 PKP1Q13835 747 aa22.7■■□□□ 1.22
CTSD-206ENST00000497544 LY6KQ17RY6 165 aa22.7■■□□□ 1.22
CTSD-206ENST00000497544 Q4G0T1 1027 aa22.7■■□□□ 1.22
CTSD-206ENST00000497544 TTC38Q5R3I4 469 aa22.7■■□□□ 1.22
CTSD-206ENST00000497544 C11orf49Q9H6J7 331 aa22.7■■□□□ 1.22
CTSD-206ENST00000497544 KCNH7Q9NS40 1196 aa22.7■■□□□ 1.22
CTSD-206ENST00000497544 DDX41Q9UJV9 622 aaKnown RBP22.7■■□□□ 1.22
CTSD-206ENST00000497544 TMEM265A0A087WTH1 108 aa22.69■■□□□ 1.22
CTSD-206ENST00000497544 NKRFO15226 690 aaKnown RBP eCLIP22.69■■□□□ 1.22
CTSD-206ENST00000497544 MARCH6O60337 910 aa22.69■■□□□ 1.22
CTSD-206ENST00000497544 MSCO60682 206 aa22.69■■□□□ 1.22
CTSD-206ENST00000497544 F13A1P00488 732 aa22.69■■□□□ 1.22
CTSD-206ENST00000497544 SMPD1P17405 629 aa22.69■■□□□ 1.22
CTSD-206ENST00000497544 ZNF174Q15697 407 aa22.69■■□□□ 1.22
CTSD-206ENST00000497544 DUSP28Q4G0W2 176 aa22.69■■□□□ 1.22
CTSD-206ENST00000497544 MYSM1Q5VVJ2 828 aa22.69■■□□□ 1.22
CTSD-206ENST00000497544 ANO1Q5XXA6 986 aa22.69■■□□□ 1.22
CTSD-206ENST00000497544 CCDC62Q6P9F0 684 aa22.69■■□□□ 1.22
CTSD-206ENST00000497544 MBOAT7Q96N66 472 aa22.69■■□□□ 1.22
CTSD-206ENST00000497544 DDX20Q9UHI6 824 aaKnown RBP22.69■■□□□ 1.22
CTSD-206ENST00000497544 ARIH2O95376 493 aa22.68■■□□□ 1.22
CTSD-206ENST00000497544 BRD1O95696 1058 aa22.68■■□□□ 1.22
CTSD-206ENST00000497544 RARBP10826 455 aa22.68■■□□□ 1.22
CTSD-206ENST00000497544 MCM7P33993 719 aa22.68■■□□□ 1.22
CTSD-206ENST00000497544 TOB1P50616 345 aaPredicted RBP22.68■■□□□ 1.22
CTSD-206ENST00000497544 SEMA3FQ13275 785 aa22.68■■□□□ 1.22
CTSD-206ENST00000497544 NEDD9Q14511 834 aa22.68■■□□□ 1.22
CTSD-206ENST00000497544 GIMAP8Q8ND71 665 aaPredicted RBP22.68■■□□□ 1.22
CTSD-206ENST00000497544 PKD2L1Q9P0L9 805 aa22.68■■□□□ 1.22
CTSD-206ENST00000497544 DYNC1LI2O43237 492 aaPredicted RBP22.67■■□□□ 1.22
CTSD-206ENST00000497544 DUSP11O75319 330 aaKnown RBP22.67■■□□□ 1.22
CTSD-206ENST00000497544 BAG4O95429 457 aaKnown RBP22.67■■□□□ 1.22
CTSD-206ENST00000497544 GH1P01241 217 aa22.67■■□□□ 1.22
CTSD-206ENST00000497544 DHX37Q8IY37 1157 aaKnown RBP22.67■■□□□ 1.22
CTSD-206ENST00000497544 MYLIPQ8WY64 445 aa22.67■■□□□ 1.22
CTSD-206ENST00000497544 COPS5Q92905 334 aa22.67■■□□□ 1.22
CTSD-206ENST00000497544 UIMC1Q96RL1 719 aa22.67■■□□□ 1.22
CTSD-206ENST00000497544 SENP7Q9BQF6 1050 aa22.67■■□□□ 1.22
CTSD-206ENST00000497544 ZNF577Q9BSK1 485 aa22.67■■□□□ 1.22
CTSD-206ENST00000497544 AP5M1Q9H0R1 490 aa22.67■■□□□ 1.22
CTSD-206ENST00000497544 MLXIPQ9HAP2 919 aa22.67■■□□□ 1.22
CTSD-206ENST00000497544 AGO4Q9HCK5 861 aaKnown RBP22.67■■□□□ 1.22
CTSD-206ENST00000497544 Q9Y3F1 56 aa22.67■■□□□ 1.22
CTSD-206ENST00000497544 WNT7AO00755 349 aa22.66■■□□□ 1.22
CTSD-206ENST00000497544 SLC37A4O43826 429 aa22.66■■□□□ 1.22
CTSD-206ENST00000497544 NEMFO60524 1076 aa22.66■■□□□ 1.22
CTSD-206ENST00000497544 ATP9AO75110 1047 aa22.66■■□□□ 1.22
CTSD-206ENST00000497544 DDIT3P35638 169 aa22.66■■□□□ 1.22
CTSD-206ENST00000497544 SP2Q02086 613 aa22.66■■□□□ 1.22
CTSD-206ENST00000497544 ORC2Q13416 577 aaPredicted RBP22.66■■□□□ 1.22
CTSD-206ENST00000497544 TJAP1Q5JTD0 557 aa22.66■■□□□ 1.22
CTSD-206ENST00000497544 TMEM63BQ5T3F8 832 aa22.66■■□□□ 1.22
CTSD-206ENST00000497544 GJC2Q5T442 439 aaPredicted RBP22.66■■□□□ 1.22
CTSD-206ENST00000497544 FAM173BQ6P4H8 233 aa22.66■■□□□ 1.22
CTSD-206ENST00000497544 LENG9Q96B70 501 aa22.66■■□□□ 1.22
CTSD-206ENST00000497544 SDF4Q9BRK5 362 aa22.66■■□□□ 1.22
CTSD-206ENST00000497544 SPC25Q9HBM1 224 aa22.66■■□□□ 1.22
CTSD-206ENST00000497544 CIZ1Q9ULV3 898 aaPredicted RBP22.66■■□□□ 1.22
CTSD-206ENST00000497544 GNEQ9Y223 722 aaKnown RBP22.66■■□□□ 1.22
CTSD-206ENST00000497544 ZDHHC9Q9Y397 364 aa22.66■■□□□ 1.22
CTSD-206ENST00000497544 PCDHB6Q9Y5E3 794 aa22.66■■□□□ 1.22
CTSD-206ENST00000497544 IPO5O00410 1097 aaKnown RBP22.65■■□□□ 1.22
CTSD-206ENST00000497544 MSH4O15457 936 aa22.65■■□□□ 1.22
CTSD-206ENST00000497544 GGPS1O95749 300 aa22.65■■□□□ 1.22
CTSD-206ENST00000497544 UBA1P22314 1058 aaKnown RBP22.65■■□□□ 1.22
CTSD-206ENST00000497544 LAMC2Q13753 1193 aa22.65■■□□□ 1.22
CTSD-206ENST00000497544 NBR1Q14596 966 aa22.65■■□□□ 1.22
CTSD-206ENST00000497544 CELF3Q5SZQ8 465 aaKnown RBP22.65■■□□□ 1.22
CTSD-206ENST00000497544 OR6J1Q8NGC5 347 aa22.65■■□□□ 1.22
CTSD-206ENST00000497544 SEMA6BQ9H3T3 888 aa22.65■■□□□ 1.22
CTSD-206ENST00000497544 TBC1D22BQ9NU19 505 aa22.65■■□□□ 1.22
CTSD-206ENST00000497544 TBX3O15119 743 aa22.64■■□□□ 1.21
CTSD-206ENST00000497544 ADCY6O43306 1168 aa22.64■■□□□ 1.21
CTSD-206ENST00000497544 KCNA2P16389 499 aa22.64■■□□□ 1.21
CTSD-206ENST00000497544 CALCRLQ16602 461 aa22.64■■□□□ 1.21
CTSD-206ENST00000497544 CYFIP1Q7L576 1253 aa22.64■■□□□ 1.21
CTSD-206ENST00000497544 TLK2Q86UE8 772 aa22.64■■□□□ 1.21
CTSD-206ENST00000497544 POTEDQ86YR6 584 aa22.64■■□□□ 1.21
CTSD-206ENST00000497544 SLFN12Q8IYM2 578 aa22.64■■□□□ 1.21
CTSD-206ENST00000497544 LENG1Q96BZ8 264 aaPredicted RBP22.64■■□□□ 1.21
CTSD-206ENST00000497544 FAM20AQ96MK3 541 aa22.64■■□□□ 1.21
CTSD-206ENST00000497544 ZNF396Q96N95 335 aaPredicted RBP22.64■■□□□ 1.21
CTSD-206ENST00000497544 XPNPEP3Q9NQH7 507 aa22.64■■□□□ 1.21
CTSD-206ENST00000497544 EIF4ENIF1Q9NRA8 985 aaKnown RBP22.64■■□□□ 1.21
CTSD-206ENST00000497544 NFASCO94856 1347 aa22.63■■□□□ 1.21
CTSD-206ENST00000497544 SORBS3O60504 671 aa22.63■■□□□ 1.21
CTSD-206ENST00000497544 FOXD4L6Q3SYB3 417 aaPredicted RBP22.63■■□□□ 1.21
CTSD-206ENST00000497544 LHX8Q68G74 356 aa22.63■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms