RNA–Protein interactions for RNA: ENST00000496907.1

HMGCL-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 3

Gene HMGCL, Length 858 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-206ENST00000496907 COBLO75128 1261 aa6.94□□□□□ -1.3
HMGCL-206ENST00000496907 CCND2P30279 289 aa6.94□□□□□ -1.3
HMGCL-206ENST00000496907 ALDH5A1P51649 535 aaPredicted RBP6.94□□□□□ -1.3
HMGCL-206ENST00000496907 COL9A3Q14050 684 aaPredicted RBP6.94□□□□□ -1.3
HMGCL-206ENST00000496907 SHHQ15465 462 aa6.94□□□□□ -1.3
HMGCL-206ENST00000496907 BRDTQ58F21 947 aaPredicted RBP6.94□□□□□ -1.3
HMGCL-206ENST00000496907 MAP3K21Q5TCX8 1036 aa6.94□□□□□ -1.3
HMGCL-206ENST00000496907 WWC2Q6AWC2 1192 aa6.94□□□□□ -1.3
HMGCL-206ENST00000496907 NOL8Q76FK4 1167 aaKnown RBP6.94□□□□□ -1.3
HMGCL-206ENST00000496907 RASGRP2Q7LDG7 609 aa6.94□□□□□ -1.3
HMGCL-206ENST00000496907 KRT25Q7Z3Z0 450 aa6.94□□□□□ -1.3
HMGCL-206ENST00000496907 VSIG10LQ86VR7 867 aa6.94□□□□□ -1.3
HMGCL-206ENST00000496907 RAB11FIP4Q86YS3 637 aa6.94□□□□□ -1.3
HMGCL-206ENST00000496907 CCDC83Q8IWF9 413 aa6.94□□□□□ -1.3
HMGCL-206ENST00000496907 BLIDQ8IZY5 108 aa6.94□□□□□ -1.3
HMGCL-206ENST00000496907 REXO1Q8N1G1 1221 aaKnown RBP6.94□□□□□ -1.3
HMGCL-206ENST00000496907 NECAB1Q8N987 351 aa6.94□□□□□ -1.3
HMGCL-206ENST00000496907 PIBF1Q8WXW3 757 aa6.94□□□□□ -1.3
HMGCL-206ENST00000496907 C8orf76Q96K31 380 aa6.94□□□□□ -1.3
HMGCL-206ENST00000496907 SEZ6LQ9BYH1 1024 aa6.94□□□□□ -1.3
HMGCL-206ENST00000496907 SENP6Q9GZR1 1112 aaPredicted RBP6.94□□□□□ -1.3
HMGCL-206ENST00000496907 PRDM5Q9NQX1 630 aaPredicted RBP6.94□□□□□ -1.3
HMGCL-206ENST00000496907 FAM184BQ9ULE4 1060 aa6.94□□□□□ -1.3
HMGCL-206ENST00000496907 PCDHA6Q9UN73 950 aa6.94□□□□□ -1.3
HMGCL-206ENST00000496907 LHX6Q9UPM6 363 aa6.94□□□□□ -1.3
HMGCL-206ENST00000496907 PCDHA8Q9Y5H6 950 aa6.94□□□□□ -1.3
HMGCL-206ENST00000496907 ZFHX2Q9C0A1 2572 aaPredicted RBP6.94□□□□□ -1.3
HMGCL-206ENST00000496907 C5orf42Q9H799 3197 aa6.94□□□□□ -1.3
HMGCL-206ENST00000496907 CHD6Q8TD26 2715 aa6.93□□□□□ -1.3
HMGCL-206ENST00000496907 KMT2BQ9UMN6 2715 aaPredicted RBP6.93□□□□□ -1.3
HMGCL-206ENST00000496907 CCDC194A0A1B0GVG4 234 aa6.93□□□□□ -1.3
HMGCL-206ENST00000496907 H3BQV1 296 aa6.93□□□□□ -1.3
HMGCL-206ENST00000496907 SEPT4O43236 478 aa6.93□□□□□ -1.3
HMGCL-206ENST00000496907 ZEB2O60315 1214 aa6.93□□□□□ -1.3
HMGCL-206ENST00000496907 KPNA6O60684 536 aa6.93□□□□□ -1.3
HMGCL-206ENST00000496907 CTDNEP1O95476 244 aa6.93□□□□□ -1.3
HMGCL-206ENST00000496907 PGK2P07205 417 aa6.93□□□□□ -1.3
HMGCL-206ENST00000496907 NR3C2P08235 984 aa6.93□□□□□ -1.3
HMGCL-206ENST00000496907 CYP3A4P08684 503 aa6.93□□□□□ -1.3
HMGCL-206ENST00000496907 AKR1A1P14550 325 aa6.93□□□□□ -1.3
HMGCL-206ENST00000496907 EDNRBP24530 442 aa6.93□□□□□ -1.3
HMGCL-206ENST00000496907 CCND3P30281 292 aaPredicted RBP6.93□□□□□ -1.3
HMGCL-206ENST00000496907 KRT2P35908 639 aa6.93□□□□□ -1.3
HMGCL-206ENST00000496907 ZNF76P36508 570 aa6.93□□□□□ -1.3
HMGCL-206ENST00000496907 CACNB2Q08289 660 aaPredicted RBP6.93□□□□□ -1.3
HMGCL-206ENST00000496907 ORC2Q13416 577 aaPredicted RBP6.93□□□□□ -1.3
HMGCL-206ENST00000496907 ACVR2BQ13705 512 aa6.93□□□□□ -1.3
HMGCL-206ENST00000496907 GNL2Q13823 731 aaKnown RBP6.93□□□□□ -1.3
HMGCL-206ENST00000496907 TTLL4Q14679 1199 aa6.93□□□□□ -1.3
HMGCL-206ENST00000496907 SLC35G1Q2M3R5 365 aa6.93□□□□□ -1.3
HMGCL-206ENST00000496907 C9orf50Q5SZB4 431 aa6.93□□□□□ -1.3
HMGCL-206ENST00000496907 PCNX4Q63HM2 1172 aa6.93□□□□□ -1.3
HMGCL-206ENST00000496907 LARP1BQ659C4 914 aaKnown RBP6.93□□□□□ -1.3
HMGCL-206ENST00000496907 MOXD1Q6UVY6 613 aa6.93□□□□□ -1.3
HMGCL-206ENST00000496907 NIPA1Q7RTP0 329 aa6.93□□□□□ -1.3
HMGCL-206ENST00000496907 FCHSD1Q86WN1 690 aa6.93□□□□□ -1.3
HMGCL-206ENST00000496907 ARRDC4Q8NCT1 418 aa6.93□□□□□ -1.3
HMGCL-206ENST00000496907 FBXO18Q8NFZ0 1043 aa6.93□□□□□ -1.3
HMGCL-206ENST00000496907 NPLOC4Q8TAT6 608 aa6.93□□□□□ -1.3
HMGCL-206ENST00000496907 SCFD2Q8WU76 684 aa6.93□□□□□ -1.3
HMGCL-206ENST00000496907 TNPO1Q92973 898 aaKnown RBP6.93□□□□□ -1.3
HMGCL-206ENST00000496907 TAAR1Q96RJ0 339 aa6.93□□□□□ -1.3
HMGCL-206ENST00000496907 PHF20Q9BVI0 1012 aa6.93□□□□□ -1.3
HMGCL-206ENST00000496907 FOXP1Q9H334 677 aaPredicted RBP6.93□□□□□ -1.3
HMGCL-206ENST00000496907 PXMP2Q9NR77 195 aa6.93□□□□□ -1.3
HMGCL-206ENST00000496907 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.93□□□□□ -1.3
HMGCL-206ENST00000496907 ATP11BQ9Y2G3 1177 aa6.93□□□□□ -1.3
HMGCL-206ENST00000496907 DNAH12Q6ZR08 3092 aa6.92□□□□□ -1.3
HMGCL-206ENST00000496907 MYH4Q9Y623 1939 aa6.92□□□□□ -1.3
HMGCL-206ENST00000496907 RBM47A0AV96 593 aaKnown RBP6.92□□□□□ -1.3
HMGCL-206ENST00000496907 SOWAHBA6NEL2 793 aa6.92□□□□□ -1.3
HMGCL-206ENST00000496907 FIBPO43427 364 aa6.92□□□□□ -1.3
HMGCL-206ENST00000496907 GFRA3O60609 400 aa6.92□□□□□ -1.3
HMGCL-206ENST00000496907 PEX10O60683 326 aa6.92□□□□□ -1.3
HMGCL-206ENST00000496907 GPR37L1O60883 481 aa6.92□□□□□ -1.3
HMGCL-206ENST00000496907 IGHA2P01877 340 aa6.92□□□□□ -1.3
HMGCL-206ENST00000496907 MMP1P03956 469 aa6.92□□□□□ -1.3
HMGCL-206ENST00000496907 NUDT7P0C024 238 aa6.92□□□□□ -1.3
HMGCL-206ENST00000496907 FDPSP14324 419 aaKnown RBP6.92□□□□□ -1.3
HMGCL-206ENST00000496907 GCFC2P16383 781 aaKnown RBP6.92□□□□□ -1.3
HMGCL-206ENST00000496907 CNGA1P29973 690 aa6.92□□□□□ -1.3
HMGCL-206ENST00000496907 ICAM3P32942 547 aa6.92□□□□□ -1.3
HMGCL-206ENST00000496907 SREBF1P36956 1147 aa6.92□□□□□ -1.3
HMGCL-206ENST00000496907 ANP32AP39687 249 aaKnown RBP6.92□□□□□ -1.3
HMGCL-206ENST00000496907 TRAPPC10P48553 1259 aa6.92□□□□□ -1.3
HMGCL-206ENST00000496907 CLK2P49760 499 aaKnown RBP6.92□□□□□ -1.3
HMGCL-206ENST00000496907 RTP1P59025 263 aa6.92□□□□□ -1.3
HMGCL-206ENST00000496907 SMAD3P84022 425 aaKnown RBP6.92□□□□□ -1.3
HMGCL-206ENST00000496907 FOXK1P85037 733 aa6.92□□□□□ -1.3
HMGCL-206ENST00000496907 SETQ01105 290 aaPredicted RBP6.92□□□□□ -1.3
HMGCL-206ENST00000496907 TFF2Q03403 129 aa6.92□□□□□ -1.3
HMGCL-206ENST00000496907 NEDD9Q14511 834 aa6.92□□□□□ -1.3
HMGCL-206ENST00000496907 PGM5Q15124 567 aa6.92□□□□□ -1.3
HMGCL-206ENST00000496907 NONOQ15233 471 aaKnown RBP eCLIP6.92□□□□□ -1.3
HMGCL-206ENST00000496907 CCL14Q16627 93 aa6.92□□□□□ -1.3
HMGCL-206ENST00000496907 PPP1R15BQ5SWA1 713 aa6.92□□□□□ -1.3
HMGCL-206ENST00000496907 DMRTA1Q5VZB9 504 aa6.92□□□□□ -1.3
HMGCL-206ENST00000496907 ARMCX2Q7L311 632 aa6.92□□□□□ -1.3
HMGCL-206ENST00000496907 TMC2Q8TDI7 906 aa6.92□□□□□ -1.3
HMGCL-206ENST00000496907 GPKOWQ92917 476 aaPredicted RBP eCLIP6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms