RNA–Protein interactions for RNA: ENST00000496445.5

VTI1A-209, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-209ENST00000496445 TRIM71Q2Q1W2 868 aaKnown RBP16.43■□□□□ 0.22
VTI1A-209ENST00000496445 WWC2Q6AWC2 1192 aa16.43■□□□□ 0.22
VTI1A-209ENST00000496445 TYW1BQ6NUM6 668 aa16.43■□□□□ 0.22
VTI1A-209ENST00000496445 METTL7BQ6UX53 244 aa16.43■□□□□ 0.22
VTI1A-209ENST00000496445 LRRC8DQ7L1W4 858 aa16.43■□□□□ 0.22
VTI1A-209ENST00000496445 CYFIP1Q7L576 1253 aa16.43■□□□□ 0.22
VTI1A-209ENST00000496445 DHX32Q7L7V1 743 aaKnown RBP16.43■□□□□ 0.22
VTI1A-209ENST00000496445 PSTPIP2Q9H939 334 aa16.43■□□□□ 0.22
VTI1A-209ENST00000496445 COL4A4P53420 1690 aaPredicted RBP16.43■□□□□ 0.22
VTI1A-209ENST00000496445 CKBP12277 381 aa16.42■□□□□ 0.22
VTI1A-209ENST00000496445 ACTN1P12814 892 aa16.42■□□□□ 0.22
VTI1A-209ENST00000496445 HOXC8P31273 242 aa16.42■□□□□ 0.22
VTI1A-209ENST00000496445 PTK7Q13308 1070 aa16.42■□□□□ 0.22
VTI1A-209ENST00000496445 NEDD9Q14511 834 aa16.42■□□□□ 0.22
VTI1A-209ENST00000496445 TCTN1Q2MV58 587 aa16.42■□□□□ 0.22
VTI1A-209ENST00000496445 XRRA1Q6P2D8 792 aa16.42■□□□□ 0.22
VTI1A-209ENST00000496445 HEATR3Q7Z4Q2 680 aa16.42■□□□□ 0.22
VTI1A-209ENST00000496445 KCNB2Q92953 911 aa16.42■□□□□ 0.22
VTI1A-209ENST00000496445 CCDC136Q96JN2 1154 aa16.42■□□□□ 0.22
VTI1A-209ENST00000496445 GPR20Q99678 358 aa16.42■□□□□ 0.22
VTI1A-209ENST00000496445 PRDM12Q9H4Q4 367 aa16.42■□□□□ 0.22
VTI1A-209ENST00000496445 RBM28Q9NW13 759 aaKnown RBP16.42■□□□□ 0.22
VTI1A-209ENST00000496445 MICAL3Q7RTP6 2002 aa16.41■□□□□ 0.22
VTI1A-209ENST00000496445 DLL1O00548 723 aa16.41■□□□□ 0.22
VTI1A-209ENST00000496445 ZBTB43O43298 467 aa16.41■□□□□ 0.22
VTI1A-209ENST00000496445 NBNO60934 754 aa16.41■□□□□ 0.22
VTI1A-209ENST00000496445 CXCL10P02778 98 aa16.41■□□□□ 0.22
VTI1A-209ENST00000496445 CPA1P15085 419 aa16.41■□□□□ 0.22
VTI1A-209ENST00000496445 KRT32Q14532 448 aa16.41■□□□□ 0.22
VTI1A-209ENST00000496445 MBTPS1Q14703 1052 aa16.41■□□□□ 0.22
VTI1A-209ENST00000496445 RTN1Q16799 776 aa16.41■□□□□ 0.22
VTI1A-209ENST00000496445 TRIM50Q86XT4 487 aa16.41■□□□□ 0.22
VTI1A-209ENST00000496445 USP38Q8NB14 1042 aa16.41■□□□□ 0.22
VTI1A-209ENST00000496445 SLC9A7Q96T83 725 aa16.41■□□□□ 0.22
VTI1A-209ENST00000496445 SENP7Q9BQF6 1050 aa16.41■□□□□ 0.22
VTI1A-209ENST00000496445 FTOQ9C0B1 505 aaKnown RBP eCLIP16.41■□□□□ 0.22
VTI1A-209ENST00000496445 FAM217BQ9NTX9 383 aaPredicted RBP16.41■□□□□ 0.22
VTI1A-209ENST00000496445 PCDHA11Q9Y5I1 949 aa16.41■□□□□ 0.22
VTI1A-209ENST00000496445 KLF18A0A0U1RQI7 1052 aa16.4■□□□□ 0.22
VTI1A-209ENST00000496445 H3BRB1 525 aa16.4■□□□□ 0.22
VTI1A-209ENST00000496445 NOP56O00567 594 aaKnown RBP16.4■□□□□ 0.22
VTI1A-209ENST00000496445 BAIAP3O94812 1187 aa16.4■□□□□ 0.22
VTI1A-209ENST00000496445 SMIM10L2AP0DMW4 78 aa16.4■□□□□ 0.22
VTI1A-209ENST00000496445 SMIM10L2BP0DMW5 78 aa16.4■□□□□ 0.22
VTI1A-209ENST00000496445 KCNA2P16389 499 aa16.4■□□□□ 0.22
VTI1A-209ENST00000496445 ITGB5P18084 799 aa16.4■□□□□ 0.22
VTI1A-209ENST00000496445 CDC27P30260 824 aa16.4■□□□□ 0.22
VTI1A-209ENST00000496445 ADGRE1Q14246 886 aa16.4■□□□□ 0.22
VTI1A-209ENST00000496445 ZNF618Q5T7W0 954 aa16.4■□□□□ 0.22
VTI1A-209ENST00000496445 SYNE3Q6ZMZ3 975 aa16.4■□□□□ 0.22
VTI1A-209ENST00000496445 SERINC5Q86VE9 423 aa16.4■□□□□ 0.22
VTI1A-209ENST00000496445 TUT1Q9H6E5 874 aaKnown RBP16.4■□□□□ 0.22
VTI1A-209ENST00000496445 SLC28A3Q9HAS3 691 aa16.4■□□□□ 0.22
VTI1A-209ENST00000496445 NID2Q14112 1375 aa16.39■□□□□ 0.21
VTI1A-209ENST00000496445 GOLGA8AA7E2F4 631 aa16.39■□□□□ 0.21
VTI1A-209ENST00000496445 GOLGA8BA8MQT2 603 aa16.39■□□□□ 0.21
VTI1A-209ENST00000496445 ATP9AO75110 1047 aa16.39■□□□□ 0.21
VTI1A-209ENST00000496445 HSPA4P34932 840 aa16.39■□□□□ 0.21
VTI1A-209ENST00000496445 WDR5P61964 334 aaKnown RBP16.39■□□□□ 0.21
VTI1A-209ENST00000496445 SP4Q02446 784 aa16.39■□□□□ 0.21
VTI1A-209ENST00000496445 PPP2R2DQ66LE6 453 aa16.39■□□□□ 0.21
VTI1A-209ENST00000496445 NLRX1Q86UT6 975 aa16.39■□□□□ 0.21
VTI1A-209ENST00000496445 GPRASP2Q96D09 838 aa16.39■□□□□ 0.21
VTI1A-209ENST00000496445 USP26Q9BXU7 913 aa16.39■□□□□ 0.21
VTI1A-209ENST00000496445 PCDHA6Q9UN73 950 aa16.39■□□□□ 0.21
VTI1A-209ENST00000496445 PCDHA8Q9Y5H6 950 aa16.39■□□□□ 0.21
VTI1A-209ENST00000496445 SNX14Q9Y5W7 946 aa16.39■□□□□ 0.21
VTI1A-209ENST00000496445 UBIAD1Q9Y5Z9 338 aa16.39■□□□□ 0.21
VTI1A-209ENST00000496445 KAT6AQ92794 2004 aa16.38■□□□□ 0.21
VTI1A-209ENST00000496445 C17orf102A2RUQ5 167 aa16.38■□□□□ 0.21
VTI1A-209ENST00000496445 SPDYE3A6NKU9 549 aa16.38■□□□□ 0.21
VTI1A-209ENST00000496445 STXBP3O00186 592 aa16.38■□□□□ 0.21
VTI1A-209ENST00000496445 ARHGEF15O94989 841 aa16.38■□□□□ 0.21
VTI1A-209ENST00000496445 CA3P07451 260 aa16.38■□□□□ 0.21
VTI1A-209ENST00000496445 RCAN1P53805 252 aa16.38■□□□□ 0.21
VTI1A-209ENST00000496445 NAPAP54920 295 aa16.38■□□□□ 0.21
VTI1A-209ENST00000496445 PPP1R18Q6NYC8 613 aa16.38■□□□□ 0.21
VTI1A-209ENST00000496445 CNKSR3Q6P9H4 555 aa16.38■□□□□ 0.21
VTI1A-209ENST00000496445 HERC6Q8IVU3 1022 aa16.38■□□□□ 0.21
VTI1A-209ENST00000496445 PHOSPHO2Q8TCD6 241 aa16.38■□□□□ 0.21
VTI1A-209ENST00000496445 GAS2L1Q99501 681 aaPredicted RBP16.38■□□□□ 0.21
VTI1A-209ENST00000496445 RNPEPQ9H4A4 650 aa16.38■□□□□ 0.21
VTI1A-209ENST00000496445 TREHO43280 583 aa16.37■□□□□ 0.21
VTI1A-209ENST00000496445 PARNO95453 639 aaKnown RBP16.37■□□□□ 0.21
VTI1A-209ENST00000496445 HMGB1P09429 215 aaKnown RBP16.37■□□□□ 0.21
VTI1A-209ENST00000496445 DEFB103AP81534 67 aa16.37■□□□□ 0.21
VTI1A-209ENST00000496445 APOBRQ0VD83 1088 aa16.37■□□□□ 0.21
VTI1A-209ENST00000496445 UTP14CQ5TAP6 766 aaKnown RBP16.37■□□□□ 0.21
VTI1A-209ENST00000496445 Q6ZUG5 572 aa16.37■□□□□ 0.21
VTI1A-209ENST00000496445 TMCO2Q7Z6W1 182 aaPredicted RBP16.37■□□□□ 0.21
VTI1A-209ENST00000496445 ATP6V0A1Q93050 837 aa16.37■□□□□ 0.21
VTI1A-209ENST00000496445 PGBD1Q96JS3 809 aa16.37■□□□□ 0.21
VTI1A-209ENST00000496445 JAKMIP1Q96N16 626 aaKnown RBP16.37■□□□□ 0.21
VTI1A-209ENST00000496445 COL25A1Q9BXS0 654 aaPredicted RBP16.37■□□□□ 0.21
VTI1A-209ENST00000496445 RIC8AQ9NPQ8 531 aa16.37■□□□□ 0.21
VTI1A-209ENST00000496445 PKD2L1Q9P0L9 805 aa16.37■□□□□ 0.21
VTI1A-209ENST00000496445 TCF7P36402 384 aaPredicted RBP16.36■□□□□ 0.21
VTI1A-209ENST00000496445 THPOP40225 353 aa16.36■□□□□ 0.21
VTI1A-209ENST00000496445 METAP2P50579 478 aaKnown RBP eCLIP16.36■□□□□ 0.21
VTI1A-209ENST00000496445 ADAM17P78536 824 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms