RNA–Protein interactions for RNA: ENST00000496375.1

CXCL12-208, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5

Gene CXCL12, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-208ENST00000496375 NFXL1Q6ZNB6 911 aa16.57■□□□□ 0.24
CXCL12-208ENST00000496375 TMCO2Q7Z6W1 182 aaPredicted RBP16.57■□□□□ 0.24
CXCL12-208ENST00000496375 SMARCC2Q8TAQ2 1214 aa16.57■□□□□ 0.24
CXCL12-208ENST00000496375 IL17RAQ96F46 866 aa16.57■□□□□ 0.24
CXCL12-208ENST00000496375 TMEM87BQ96K49 555 aa16.57■□□□□ 0.24
CXCL12-208ENST00000496375 INPP4AQ96PE3 977 aaPredicted RBP16.57■□□□□ 0.24
CXCL12-208ENST00000496375 TSPYL2Q9H2G4 693 aaPredicted RBP16.57■□□□□ 0.24
CXCL12-208ENST00000496375 RTEL1Q9NZ71 1219 aa16.57■□□□□ 0.24
CXCL12-208ENST00000496375 SNX14Q9Y5W7 946 aa16.57■□□□□ 0.24
CXCL12-208ENST00000496375 MTCH2Q9Y6C9 303 aa16.57■□□□□ 0.24
CXCL12-208ENST00000496375 DOCK5Q9H7D0 1870 aa16.56■□□□□ 0.24
CXCL12-208ENST00000496375 ABHD14A-ACY1A0A1B0GW23 586 aa16.56■□□□□ 0.24
CXCL12-208ENST00000496375 H3BRB1 525 aa16.56■□□□□ 0.24
CXCL12-208ENST00000496375 NOP56O00567 594 aaKnown RBP16.56■□□□□ 0.24
CXCL12-208ENST00000496375 SH2B2O14492 632 aaPredicted RBP16.56■□□□□ 0.24
CXCL12-208ENST00000496375 GTPBP6O43824 516 aaPredicted RBP16.56■□□□□ 0.24
CXCL12-208ENST00000496375 STAM2O75886 525 aa16.56■□□□□ 0.24
CXCL12-208ENST00000496375 LGALS2P05162 132 aa16.56■□□□□ 0.24
CXCL12-208ENST00000496375 HMGB1P09429 215 aaKnown RBP16.56■□□□□ 0.24
CXCL12-208ENST00000496375 ICAM3P32942 547 aa16.56■□□□□ 0.24
CXCL12-208ENST00000496375 LIFRP42702 1097 aa16.56■□□□□ 0.24
CXCL12-208ENST00000496375 EXOSC10Q01780 885 aaKnown RBP16.56■□□□□ 0.24
CXCL12-208ENST00000496375 SEMA3FQ13275 785 aa16.56■□□□□ 0.24
CXCL12-208ENST00000496375 C8orf34Q49A92 452 aa16.56■□□□□ 0.24
CXCL12-208ENST00000496375 USP17L6PQ6QN14 398 aa16.56■□□□□ 0.24
CXCL12-208ENST00000496375 CUL5Q93034 780 aa16.56■□□□□ 0.24
CXCL12-208ENST00000496375 NEK1Q96PY6 1258 aa16.56■□□□□ 0.24
CXCL12-208ENST00000496375 ZBED2Q9BTP6 218 aa16.56■□□□□ 0.24
CXCL12-208ENST00000496375 TUT1Q9H6E5 874 aaKnown RBP16.56■□□□□ 0.24
CXCL12-208ENST00000496375 SEC63Q9UGP8 760 aaKnown RBP16.56■□□□□ 0.24
CXCL12-208ENST00000496375 C17orf102A2RUQ5 167 aa16.55■□□□□ 0.24
CXCL12-208ENST00000496375 LCHNA4D1U4 455 aa16.55■□□□□ 0.24
CXCL12-208ENST00000496375 CCDC69A6NI79 296 aa16.55■□□□□ 0.24
CXCL12-208ENST00000496375 SPATA31C2B4DYI2 1134 aa16.55■□□□□ 0.24
CXCL12-208ENST00000496375 FIBPO43427 364 aa16.55■□□□□ 0.24
CXCL12-208ENST00000496375 PLEKHA8P1O95397 391 aa16.55■□□□□ 0.24
CXCL12-208ENST00000496375 SMIM10L2AP0DMW4 78 aa16.55■□□□□ 0.24
CXCL12-208ENST00000496375 SMIM10L2BP0DMW5 78 aa16.55■□□□□ 0.24
CXCL12-208ENST00000496375 POU3F3P20264 500 aaPredicted RBP16.55■□□□□ 0.24
CXCL12-208ENST00000496375 SMARCA1P28370 1054 aa16.55■□□□□ 0.24
CXCL12-208ENST00000496375 THPOP40225 353 aa16.55■□□□□ 0.24
CXCL12-208ENST00000496375 GNAQP50148 359 aa16.55■□□□□ 0.24
CXCL12-208ENST00000496375 IKBKEQ14164 716 aa16.55■□□□□ 0.24
CXCL12-208ENST00000496375 NEDD9Q14511 834 aa16.55■□□□□ 0.24
CXCL12-208ENST00000496375 MBTPS1Q14703 1052 aa16.55■□□□□ 0.24
CXCL12-208ENST00000496375 ADCK5Q3MIX3 580 aa16.55■□□□□ 0.24
CXCL12-208ENST00000496375 METTL7BQ6UX53 244 aa16.55■□□□□ 0.24
CXCL12-208ENST00000496375 CYFIP1Q7L576 1253 aa16.55■□□□□ 0.24
CXCL12-208ENST00000496375 SPRED2Q7Z698 418 aa16.55■□□□□ 0.24
CXCL12-208ENST00000496375 SERINC5Q86VE9 423 aa16.55■□□□□ 0.24
CXCL12-208ENST00000496375 TMTC2Q8N394 836 aa16.55■□□□□ 0.24
CXCL12-208ENST00000496375 FBXL16Q8N461 479 aa16.55■□□□□ 0.24
CXCL12-208ENST00000496375 SRBD1Q8N5C6 995 aaKnown RBP16.55■□□□□ 0.24
CXCL12-208ENST00000496375 ATP6V0A1Q93050 837 aa16.55■□□□□ 0.24
CXCL12-208ENST00000496375 LZTS2Q9BRK4 669 aa16.55■□□□□ 0.24
CXCL12-208ENST00000496375 TNFRSF10AO00220 468 aa16.54■□□□□ 0.24
CXCL12-208ENST00000496375 PIK3CDO00329 1044 aa16.54■□□□□ 0.24
CXCL12-208ENST00000496375 MEIS2O14770 477 aa16.54■□□□□ 0.24
CXCL12-208ENST00000496375 EFCAB14O75071 495 aa16.54■□□□□ 0.24
CXCL12-208ENST00000496375 LGR5O75473 907 aa16.54■□□□□ 0.24
CXCL12-208ENST00000496375 RXRAP19793 462 aa16.54■□□□□ 0.24
CXCL12-208ENST00000496375 HOXC8P31273 242 aa16.54■□□□□ 0.24
CXCL12-208ENST00000496375 SKIV2LQ15477 1246 aaKnown RBP16.54■□□□□ 0.24
CXCL12-208ENST00000496375 PCNX4Q63HM2 1172 aa16.54■□□□□ 0.24
CXCL12-208ENST00000496375 KRT40Q6A162 431 aa16.54■□□□□ 0.24
CXCL12-208ENST00000496375 DHX32Q7L7V1 743 aaKnown RBP16.54■□□□□ 0.24
CXCL12-208ENST00000496375 SGMS1Q86VZ5 419 aa16.54■□□□□ 0.24
CXCL12-208ENST00000496375 CMTR1Q8N1G2 835 aaKnown RBP16.54■□□□□ 0.24
CXCL12-208ENST00000496375 IL27Q8NEV9 243 aa16.54■□□□□ 0.24
CXCL12-208ENST00000496375 ADAMTS19Q8TE59 1207 aa16.54■□□□□ 0.24
CXCL12-208ENST00000496375 GPR20Q99678 358 aa16.54■□□□□ 0.24
CXCL12-208ENST00000496375 EMSYQ7Z589 1322 aa16.53■□□□□ 0.24
CXCL12-208ENST00000496375 RSPH10B2B2RC85 870 aa16.53■□□□□ 0.24
CXCL12-208ENST00000496375 TREHO43280 583 aa16.53■□□□□ 0.24
CXCL12-208ENST00000496375 GJB5O95377 273 aa16.53■□□□□ 0.24
CXCL12-208ENST00000496375 RSPH10BP0C881 870 aa16.53■□□□□ 0.24
CXCL12-208ENST00000496375 CALM1P0DP23 149 aa16.53■□□□□ 0.24
CXCL12-208ENST00000496375 CALM2P0DP24 149 aa16.53■□□□□ 0.24
CXCL12-208ENST00000496375 CALM3P0DP25 149 aa16.53■□□□□ 0.24
CXCL12-208ENST00000496375 ANAPC15P60006 121 aa16.53■□□□□ 0.24
CXCL12-208ENST00000496375 GRB10Q13322 594 aa16.53■□□□□ 0.24
CXCL12-208ENST00000496375 XRRA1Q6P2D8 792 aa16.53■□□□□ 0.24
CXCL12-208ENST00000496375 NLRX1Q86UT6 975 aa16.53■□□□□ 0.24
CXCL12-208ENST00000496375 TRIM50Q86XT4 487 aa16.53■□□□□ 0.24
CXCL12-208ENST00000496375 RAB11FIP4Q86YS3 637 aa16.53■□□□□ 0.24
CXCL12-208ENST00000496375 RAD9AQ99638 391 aa16.53■□□□□ 0.24
CXCL12-208ENST00000496375 LRRC2Q9BYS8 371 aa16.53■□□□□ 0.24
CXCL12-208ENST00000496375 TM6SF1Q9BZW5 370 aa16.53■□□□□ 0.24
CXCL12-208ENST00000496375 RNPEPQ9H4A4 650 aa16.53■□□□□ 0.24
CXCL12-208ENST00000496375 TELO2Q9Y4R8 837 aa16.53■□□□□ 0.24
CXCL12-208ENST00000496375 COL4A4P53420 1690 aaPredicted RBP16.53■□□□□ 0.24
CXCL12-208ENST00000496375 MICAL3Q7RTP6 2002 aa16.52■□□□□ 0.24
CXCL12-208ENST00000496375 SP4Q02446 784 aa16.52■□□□□ 0.24
CXCL12-208ENST00000496375 TFF2Q03403 129 aa16.52■□□□□ 0.24
CXCL12-208ENST00000496375 UTP14CQ5TAP6 766 aaKnown RBP16.52■□□□□ 0.24
CXCL12-208ENST00000496375 FAM117BQ6P1L5 589 aa16.52■□□□□ 0.24
CXCL12-208ENST00000496375 UHRF1Q96T88 793 aaPredicted RBP16.52■□□□□ 0.24
CXCL12-208ENST00000496375 SENP7Q9BQF6 1050 aa16.52■□□□□ 0.24
CXCL12-208ENST00000496375 AGXT2Q9BYV1 514 aa16.52■□□□□ 0.24
CXCL12-208ENST00000496375 TCF20Q9UGU0 1960 aaKnown RBP16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms